RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 NARFQ9UHQ1 456 aa18.21■□□□□ 0.51
COPS3-214ENST00000577246 COL15A1P39059 1388 aa18.2■□□□□ 0.5
COPS3-214ENST00000577246 CYP19A1P11511 503 aaPredicted RBP18.2■□□□□ 0.5
COPS3-214ENST00000577246 TNS4Q8IZW8 715 aa18.2■□□□□ 0.5
COPS3-214ENST00000577246 CLSPNQ9HAW4 1339 aa18.2■□□□□ 0.5
COPS3-214ENST00000577246 RASSF7Q02833 373 aa18.19■□□□□ 0.5
COPS3-214ENST00000577246 TRIM26Q12899 539 aaPredicted RBP18.19■□□□□ 0.5
COPS3-214ENST00000577246 NFIXQ14938 502 aa18.19■□□□□ 0.5
COPS3-214ENST00000577246 KNSTRNQ9Y448 316 aa18.19■□□□□ 0.5
COPS3-214ENST00000577246 H0YIN7 160 aa18.18■□□□□ 0.5
COPS3-214ENST00000577246 SERPINB2P05120 415 aa18.18■□□□□ 0.5
COPS3-214ENST00000577246 IL13P35225 146 aa18.18■□□□□ 0.5
COPS3-214ENST00000577246 VSIG10Q8N0Z9 540 aa18.18■□□□□ 0.5
COPS3-214ENST00000577246 DPY19L2Q6NUT2 758 aa18.17■□□□□ 0.5
COPS3-214ENST00000577246 PDZRN3Q9UPQ7 1066 aa18.17■□□□□ 0.5
COPS3-214ENST00000577246 MRC1P22897 1456 aa18.17■□□□□ 0.5
COPS3-214ENST00000577246 ADAMTS7Q9UKP4 1686 aa18.17■□□□□ 0.5
COPS3-214ENST00000577246 RNMTO43148 476 aaKnown RBP18.16■□□□□ 0.5
COPS3-214ENST00000577246 C2CD5Q86YS7 1000 aa18.16■□□□□ 0.5
COPS3-214ENST00000577246 ZBTB1Q9Y2K1 713 aa18.16■□□□□ 0.5
COPS3-214ENST00000577246 SCN11AQ9UI33 1791 aa18.15■□□□□ 0.5
COPS3-214ENST00000577246 A0A087WZG4 1122 aa18.15■□□□□ 0.5
COPS3-214ENST00000577246 STARD3NLO95772 234 aa18.15■□□□□ 0.5
COPS3-214ENST00000577246 CAPN15O75808 1086 aa18.14■□□□□ 0.49
COPS3-214ENST00000577246 PRELPP51888 382 aa18.14■□□□□ 0.49
COPS3-214ENST00000577246 SLC39A6Q13433 755 aa18.14■□□□□ 0.49
COPS3-214ENST00000577246 LGR6Q9HBX8 967 aa18.14■□□□□ 0.49
COPS3-214ENST00000577246 HSPA5P11021 654 aaKnown RBP18.13■□□□□ 0.49
COPS3-214ENST00000577246 TTC5Q8N0Z6 440 aa18.13■□□□□ 0.49
COPS3-214ENST00000577246 SBF1O95248 1867 aa18.13■□□□□ 0.49
COPS3-214ENST00000577246 NRXN2Q9P2S2 1712 aa18.12■□□□□ 0.49
COPS3-214ENST00000577246 HSPA1AP0DMV8 641 aaKnown RBP18.12■□□□□ 0.49
COPS3-214ENST00000577246 HSPA1BP0DMV9 641 aaKnown RBP18.12■□□□□ 0.49
COPS3-214ENST00000577246 PDE6BP35913 854 aa18.12■□□□□ 0.49
COPS3-214ENST00000577246 BCL2L12Q9HB09 334 aa18.12■□□□□ 0.49
COPS3-214ENST00000577246 NFKBIEO00221 500 aa18.11■□□□□ 0.49
COPS3-214ENST00000577246 CANXP27824 592 aaKnown RBP18.11■□□□□ 0.49
COPS3-214ENST00000577246 DLEC1Q9Y238 1755 aa18.1■□□□□ 0.49
COPS3-214ENST00000577246 BICDL1Q6ZP65 573 aa18.1■□□□□ 0.49
COPS3-214ENST00000577246 NPM2Q86SE8 214 aaKnown RBP18.1■□□□□ 0.49
COPS3-214ENST00000577246 ZNF622Q969S3 477 aaKnown RBP eCLIP18.1■□□□□ 0.49
COPS3-214ENST00000577246 BRIP1Q9BX63 1249 aa18.1■□□□□ 0.49
COPS3-214ENST00000577246 TEX13AQ9BXU3 409 aaPredicted RBP18.1■□□□□ 0.49
COPS3-214ENST00000577246 HMOX1P09601 288 aa18.09■□□□□ 0.49
COPS3-214ENST00000577246 ERFEQ4G0M1 354 aa18.09■□□□□ 0.49
COPS3-214ENST00000577246 CARMIL3Q8ND23 1372 aa18.08■□□□□ 0.49
COPS3-214ENST00000577246 AFDNP55196 1824 aaKnown RBP18.08■□□□□ 0.48
COPS3-214ENST00000577246 EIF5P55010 431 aaKnown RBP18.08■□□□□ 0.48
COPS3-214ENST00000577246 MTHFSDQ2M296 383 aaKnown RBP18.08■□□□□ 0.48
COPS3-214ENST00000577246 SOGA3Q5TF21 947 aa18.08■□□□□ 0.48
COPS3-214ENST00000577246 TIAM2Q8IVF5 1701 aa18.08■□□□□ 0.48
COPS3-214ENST00000577246 LTBP3Q9NS15 1303 aa18.07■□□□□ 0.48
COPS3-214ENST00000577246 NPHP1O15259 732 aa18.07■□□□□ 0.48
COPS3-214ENST00000577246 CREBZFQ9NS37 354 aa18.07■□□□□ 0.48
COPS3-214ENST00000577246 C21orf2O43822 256 aa18.06■□□□□ 0.48
COPS3-214ENST00000577246 DIAPH1O60610 1272 aaKnown RBP18.06■□□□□ 0.48
COPS3-214ENST00000577246 TEFQ10587 303 aa18.06■□□□□ 0.48
COPS3-214ENST00000577246 AMER1Q5JTC6 1135 aaPredicted RBP18.06■□□□□ 0.48
COPS3-214ENST00000577246 CNKSR1Q969H4 720 aa18.06■□□□□ 0.48
COPS3-214ENST00000577246 TAOK3Q9H2K8 898 aa18.06■□□□□ 0.48
COPS3-214ENST00000577246 POTECB2RU33 542 aa18.05■□□□□ 0.48
COPS3-214ENST00000577246 TBC1D9BQ66K14 1250 aa18.05■□□□□ 0.48
COPS3-214ENST00000577246 CHADLQ6NUI6 762 aa18.05■□□□□ 0.48
COPS3-214ENST00000577246 IL6STP40189 918 aaPredicted RBP18.04■□□□□ 0.48
COPS3-214ENST00000577246 ST5P78524 1137 aa18.04■□□□□ 0.48
COPS3-214ENST00000577246 PRR5LQ6MZQ0 368 aa18.04■□□□□ 0.48
COPS3-214ENST00000577246 CNBD1Q8NA66 436 aa18.04■□□□□ 0.48
COPS3-214ENST00000577246 SETDB2Q96T68 719 aa18.04■□□□□ 0.48
COPS3-214ENST00000577246 ZNF330Q9Y3S2 320 aaPredicted RBP18.04■□□□□ 0.48
COPS3-214ENST00000577246 PCNTO95613 3336 aa18.04■□□□□ 0.48
COPS3-214ENST00000577246 HEG1Q9ULI3 1381 aa18.04■□□□□ 0.48
COPS3-214ENST00000577246 IQCA1LA6NCM1 817 aa18.03■□□□□ 0.48
COPS3-214ENST00000577246 STYK1Q6J9G0 422 aa18.03■□□□□ 0.48
COPS3-214ENST00000577246 ZNF790Q6PG37 636 aa18.03■□□□□ 0.48
COPS3-214ENST00000577246 GAS2L2Q8NHY3 880 aa18.03■□□□□ 0.48
COPS3-214ENST00000577246 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
COPS3-214ENST00000577246 ZNF496Q96IT1 587 aaPredicted RBP18.02■□□□□ 0.48
COPS3-214ENST00000577246 FMNL2Q96PY5 1086 aa18.02■□□□□ 0.48
COPS3-214ENST00000577246 PCGF6Q9BYE7 350 aa18.02■□□□□ 0.48
COPS3-214ENST00000577246 UBR2Q8IWV8 1755 aa18.02■□□□□ 0.47
COPS3-214ENST00000577246 GNAT3A8MTJ3 354 aa18.01■□□□□ 0.47
COPS3-214ENST00000577246 MASTLQ96GX5 879 aa18.01■□□□□ 0.47
COPS3-214ENST00000577246 TBC1D2BQ9UPU7 963 aa18.01■□□□□ 0.47
COPS3-214ENST00000577246 SCN7AQ01118 1682 aa18.01■□□□□ 0.47
COPS3-214ENST00000577246 PRPF40BQ6NWY9 871 aaKnown RBP18■□□□□ 0.47
COPS3-214ENST00000577246 MKRN1Q9UHC7 482 aaKnown RBP18■□□□□ 0.47
COPS3-214ENST00000577246 DDNO94850 711 aaPredicted RBP17.99■□□□□ 0.47
COPS3-214ENST00000577246 SRGNP10124 158 aa17.99■□□□□ 0.47
COPS3-214ENST00000577246 LDHDQ86WU2 507 aa17.99■□□□□ 0.47
COPS3-214ENST00000577246 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
COPS3-214ENST00000577246 CNTNAP1P78357 1384 aa17.97■□□□□ 0.47
COPS3-214ENST00000577246 CAMTA2O94983 1202 aa17.97■□□□□ 0.47
COPS3-214ENST00000577246 CCDC93Q567U6 631 aa17.97■□□□□ 0.47
COPS3-214ENST00000577246 DZIP3Q86Y13 1208 aaKnown RBP17.97■□□□□ 0.47
COPS3-214ENST00000577246 CCDC24Q8N4L8 307 aa17.97■□□□□ 0.47
COPS3-214ENST00000577246 IL17REQ8NFR9 667 aa17.97■□□□□ 0.47
COPS3-214ENST00000577246 AIDAQ96BJ3 306 aa17.97■□□□□ 0.47
COPS3-214ENST00000577246 L3MBTL3Q96JM7 780 aaPredicted RBP17.97■□□□□ 0.47
COPS3-214ENST00000577246 U2SURPO15042 1029 aaKnown RBP17.96■□□□□ 0.47
COPS3-214ENST00000577246 CLEC4GQ6UXB4 293 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms