RNA–Protein interactions for RNA: ENST00000575320.1

TFAP4-206, Transcript of transcription factor AP-4, humanhuman

TSL 2

Gene TFAP4, Length 6,491 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-206ENST00000575320 VTI1AQ96AJ9 217 aa16.22■□□□□ 0.19
TFAP4-206ENST00000575320 NCOA2Q15596 1464 aa16.22■□□□□ 0.19
TFAP4-206ENST00000575320 TRMT1Q9NXH9 659 aaKnown RBP16.21■□□□□ 0.19
TFAP4-206ENST00000575320 USP5P45974 858 aa16.21■□□□□ 0.19
TFAP4-206ENST00000575320 CCDC184Q52MB2 194 aa16.21■□□□□ 0.19
TFAP4-206ENST00000575320 HECW1Q76N89 1606 aa16.21■□□□□ 0.19
TFAP4-206ENST00000575320 KLHL10Q6JEL2 608 aa16.21■□□□□ 0.19
TFAP4-206ENST00000575320 BCCIPQ9P287 314 aaKnown RBP eCLIP16.21■□□□□ 0.19
TFAP4-206ENST00000575320 FAM135AQ9P2D6 1515 aa16.21■□□□□ 0.19
TFAP4-206ENST00000575320 CCDC178Q5BJE1 867 aa16.21■□□□□ 0.19
TFAP4-206ENST00000575320 GOPCQ9HD26 462 aa16.21■□□□□ 0.19
TFAP4-206ENST00000575320 SPINK5Q9NQ38 1064 aaPredicted RBP16.21■□□□□ 0.19
TFAP4-206ENST00000575320 PARP3Q9Y6F1 533 aa16.21■□□□□ 0.19
TFAP4-206ENST00000575320 POLR3DP05423 398 aaPredicted RBP16.2■□□□□ 0.18
TFAP4-206ENST00000575320 HDAC9Q9UKV0 1011 aa16.2■□□□□ 0.18
TFAP4-206ENST00000575320 DESP17661 470 aa16.2■□□□□ 0.18
TFAP4-206ENST00000575320 SSFA2P28290 1259 aa16.2■□□□□ 0.18
TFAP4-206ENST00000575320 IFFO1Q0D2I5 559 aa16.2■□□□□ 0.18
TFAP4-206ENST00000575320 PRPF40BQ6NWY9 871 aaKnown RBP16.2■□□□□ 0.18
TFAP4-206ENST00000575320 PPP4R3BQ5MIZ7 849 aa16.2■□□□□ 0.18
TFAP4-206ENST00000575320 BIN2Q9UBW5 565 aaPredicted RBP16.2■□□□□ 0.18
TFAP4-206ENST00000575320 SMARCA5O60264 1052 aaPredicted RBP16.2■□□□□ 0.18
TFAP4-206ENST00000575320 USP25Q9UHP3 1055 aa16.2■□□□□ 0.18
TFAP4-206ENST00000575320 FKBP15Q5T1M5 1219 aa16.19■□□□□ 0.18
TFAP4-206ENST00000575320 LUZP1Q86V48 1076 aa16.19■□□□□ 0.18
TFAP4-206ENST00000575320 C16orf45Q96MC5 204 aaPredicted RBP16.19■□□□□ 0.18
TFAP4-206ENST00000575320 ATAD2Q6PL18 1390 aa16.19■□□□□ 0.18
TFAP4-206ENST00000575320 NEBLO76041 1014 aa16.19■□□□□ 0.18
TFAP4-206ENST00000575320 GTF2F1P35269 517 aaKnown RBP eCLIP16.19■□□□□ 0.18
TFAP4-206ENST00000575320 SLFN5Q08AF3 891 aa16.19■□□□□ 0.18
TFAP4-206ENST00000575320 MICALCLQ6ZW33 695 aa16.19■□□□□ 0.18
TFAP4-206ENST00000575320 DZIP1Q86YF9 867 aaKnown RBP16.19■□□□□ 0.18
TFAP4-206ENST00000575320 TFCP2L1Q9NZI6 479 aa16.19■□□□□ 0.18
TFAP4-206ENST00000575320 CASKIN1Q8WXD9 1431 aa16.19■□□□□ 0.18
TFAP4-206ENST00000575320 EXOC6BQ9Y2D4 811 aa16.19■□□□□ 0.18
TFAP4-206ENST00000575320 SCAND2PQ9GZW5 306 aaPredicted RBP16.18■□□□□ 0.18
TFAP4-206ENST00000575320 TNPO1Q92973 898 aaKnown RBP16.18■□□□□ 0.18
TFAP4-206ENST00000575320 CEP126Q9P2H0 1117 aa16.18■□□□□ 0.18
TFAP4-206ENST00000575320 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
TFAP4-206ENST00000575320 CACNA2D4Q7Z3S7 1137 aa16.18■□□□□ 0.18
TFAP4-206ENST00000575320 DRC1Q96MC2 740 aa16.17■□□□□ 0.18
TFAP4-206ENST00000575320 MX1P20591 662 aa16.17■□□□□ 0.18
TFAP4-206ENST00000575320 POTEJP0CG39 1038 aa16.17■□□□□ 0.18
TFAP4-206ENST00000575320 DNA2P51530 1060 aa16.17■□□□□ 0.18
TFAP4-206ENST00000575320 AMOTQ4VCS5 1084 aa16.17■□□□□ 0.18
TFAP4-206ENST00000575320 CKAP2LQ8IYA6 745 aa16.17■□□□□ 0.18
TFAP4-206ENST00000575320 FEZ1Q99689 392 aa16.17■□□□□ 0.18
TFAP4-206ENST00000575320 CFTRP13569 1480 aa16.17■□□□□ 0.18
TFAP4-206ENST00000575320 CETN2P41208 172 aa16.17■□□□□ 0.18
TFAP4-206ENST00000575320 GPATCH11Q8N954 259 aa16.17■□□□□ 0.18
TFAP4-206ENST00000575320 TSG101Q99816 390 aa16.17■□□□□ 0.18
TFAP4-206ENST00000575320 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
TFAP4-206ENST00000575320 IDH1O75874 414 aaKnown RBP16.17■□□□□ 0.18
TFAP4-206ENST00000575320 NUP88Q99567 741 aaPredicted RBP16.17■□□□□ 0.18
TFAP4-206ENST00000575320 HFM1A2PYH4 1435 aa16.16■□□□□ 0.18
TFAP4-206ENST00000575320 PLEKHH1Q9ULM0 1364 aa16.16■□□□□ 0.18
TFAP4-206ENST00000575320 AIDAQ96BJ3 306 aa16.16■□□□□ 0.18
TFAP4-206ENST00000575320 ANKRD30BQ9BXX2 1392 aa16.16■□□□□ 0.18
TFAP4-206ENST00000575320 PPP1R12BO60237 982 aaPredicted RBP16.16■□□□□ 0.18
TFAP4-206ENST00000575320 CPLX3Q8WVH0 158 aa16.16■□□□□ 0.18
TFAP4-206ENST00000575320 PLB1Q6P1J6 1458 aa16.16■□□□□ 0.18
TFAP4-206ENST00000575320 TNRQ92752 1358 aa16.16■□□□□ 0.18
TFAP4-206ENST00000575320 SKAP1Q86WV1 359 aa16.16■□□□□ 0.18
TFAP4-206ENST00000575320 CCDC85AQ96PX6 553 aaPredicted RBP16.16■□□□□ 0.18
TFAP4-206ENST00000575320 FAM107BQ9H098 131 aa16.16■□□□□ 0.18
TFAP4-206ENST00000575320 IFIT1P09914 478 aaKnown RBP16.16■□□□□ 0.18
TFAP4-206ENST00000575320 GUCY1B3Q02153 619 aa16.16■□□□□ 0.18
TFAP4-206ENST00000575320 TROQ12816 1431 aaPredicted RBP16.16■□□□□ 0.18
TFAP4-206ENST00000575320 DNMBPQ6XZF7 1577 aa16.16■□□□□ 0.18
TFAP4-206ENST00000575320 GCOM1H8Y6P7 765 aaPredicted RBP16.16■□□□□ 0.18
TFAP4-206ENST00000575320 MYZAPP0CAP1 466 aa16.16■□□□□ 0.18
TFAP4-206ENST00000575320 METTL24Q5JXM2 366 aa16.16■□□□□ 0.18
TFAP4-206ENST00000575320 ZHX1Q9UKY1 873 aaPredicted RBP16.16■□□□□ 0.18
TFAP4-206ENST00000575320 GNAT3A8MTJ3 354 aa16.15■□□□□ 0.18
TFAP4-206ENST00000575320 RRS1Q15050 365 aaKnown RBP16.15■□□□□ 0.18
TFAP4-206ENST00000575320 TEX13AQ9BXU3 409 aaPredicted RBP16.15■□□□□ 0.18
TFAP4-206ENST00000575320 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
TFAP4-206ENST00000575320 CTAGE5O15320 804 aa16.15■□□□□ 0.18
TFAP4-206ENST00000575320 SH2B1Q9NRF2 756 aaPredicted RBP16.15■□□□□ 0.18
TFAP4-206ENST00000575320 HSPA2P54652 639 aa16.15■□□□□ 0.18
TFAP4-206ENST00000575320 PAFAH1B1P43034 410 aa16.15■□□□□ 0.18
TFAP4-206ENST00000575320 JDP2Q8WYK2 163 aa16.15■□□□□ 0.18
TFAP4-206ENST00000575320 KIF1BPQ96EK5 621 aa16.15■□□□□ 0.18
TFAP4-206ENST00000575320 POTEB2H3BUK9 544 aa16.14■□□□□ 0.18
TFAP4-206ENST00000575320 ADCY5O95622 1261 aa16.14■□□□□ 0.18
TFAP4-206ENST00000575320 ABCF2Q9UG63 623 aa16.14■□□□□ 0.18
TFAP4-206ENST00000575320 NEMFO60524 1076 aa16.14■□□□□ 0.17
TFAP4-206ENST00000575320 USO1O60763 962 aaKnown RBP16.14■□□□□ 0.17
TFAP4-206ENST00000575320 RAB11FIP3O75154 756 aa16.14■□□□□ 0.17
TFAP4-206ENST00000575320 SMARCC1Q92922 1105 aaPredicted RBP16.14■□□□□ 0.17
TFAP4-206ENST00000575320 TBC1D2Q9BYX2 928 aa16.14■□□□□ 0.17
TFAP4-206ENST00000575320 EHMT1Q9H9B1 1298 aa16.14■□□□□ 0.17
TFAP4-206ENST00000575320 TRMT112Q9UI30 125 aaKnown RBP16.14■□□□□ 0.17
TFAP4-206ENST00000575320 SMC1AQ14683 1233 aaKnown RBP16.14■□□□□ 0.17
TFAP4-206ENST00000575320 TMC6Q7Z403 805 aa16.14■□□□□ 0.17
TFAP4-206ENST00000575320 C8orf76Q96K31 380 aa16.14■□□□□ 0.17
TFAP4-206ENST00000575320 UBE4AQ14139 1066 aa16.14■□□□□ 0.17
TFAP4-206ENST00000575320 CCDC61Q9Y6R9 512 aa16.14■□□□□ 0.17
TFAP4-206ENST00000575320 GSTTP1A0A1W2PQM5 241 aa16.14■□□□□ 0.17
TFAP4-206ENST00000575320 CTR9Q6PD62 1173 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms