RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 MRC1P22897 1456 aa28.37■■■□□ 2.13
SPNS3-203ENST00000575185 CCDC88AQ3V6T2 1871 aa28.37■■■□□ 2.13
SPNS3-203ENST00000575185 SOS1Q07889 1333 aaPredicted RBP28.37■■■□□ 2.13
SPNS3-203ENST00000575185 IL13P35225 146 aa28.36■■■□□ 2.13
SPNS3-203ENST00000575185 FSTL1Q12841 308 aa28.36■■■□□ 2.13
SPNS3-203ENST00000575185 CCER1Q8TC90 406 aaPredicted RBP28.36■■■□□ 2.13
SPNS3-203ENST00000575185 ZPR1O75312 459 aa28.34■■■□□ 2.13
SPNS3-203ENST00000575185 LGR6Q9HBX8 967 aa28.34■■■□□ 2.13
SPNS3-203ENST00000575185 SLC39A6Q13433 755 aa28.33■■■□□ 2.13
SPNS3-203ENST00000575185 SLC52A2Q9HAB3 445 aa28.33■■■□□ 2.13
SPNS3-203ENST00000575185 UBR2Q8IWV8 1755 aa28.32■■■□□ 2.12
SPNS3-203ENST00000575185 EIF4G2P78344 907 aaKnown RBP eCLIP28.32■■■□□ 2.12
SPNS3-203ENST00000575185 NFIXQ14938 502 aa28.32■■■□□ 2.12
SPNS3-203ENST00000575185 AKAP4Q5JQC9 854 aa28.32■■■□□ 2.12
SPNS3-203ENST00000575185 COL15A1P39059 1388 aa28.32■■■□□ 2.12
SPNS3-203ENST00000575185 CYP19A1P11511 503 aaPredicted RBP28.31■■■□□ 2.12
SPNS3-203ENST00000575185 PRELPP51888 382 aa28.31■■■□□ 2.12
SPNS3-203ENST00000575185 JMYQ8N9B5 988 aa28.31■■■□□ 2.12
SPNS3-203ENST00000575185 ZBTB1Q9Y2K1 713 aa28.31■■■□□ 2.12
SPNS3-203ENST00000575185 COL13A1Q5TAT6 717 aaPredicted RBP28.3■■■□□ 2.12
SPNS3-203ENST00000575185 CARMIL3Q8ND23 1372 aa28.29■■■□□ 2.12
SPNS3-203ENST00000575185 BCL2L12Q9HB09 334 aa28.28■■■□□ 2.12
SPNS3-203ENST00000575185 NARFQ9UHQ1 456 aa28.28■■■□□ 2.12
SPNS3-203ENST00000575185 ANKRD31Q8N7Z5 1873 aa28.27■■■□□ 2.12
SPNS3-203ENST00000575185 RNMTO43148 476 aaKnown RBP28.27■■■□□ 2.12
SPNS3-203ENST00000575185 HMOX1P09601 288 aa28.26■■■□□ 2.11
SPNS3-203ENST00000575185 SMC1BQ8NDV3 1235 aa28.26■■■□□ 2.11
SPNS3-203ENST00000575185 COL11A2P13942 1736 aaPredicted RBP28.25■■■□□ 2.11
SPNS3-203ENST00000575185 SERPINB2P05120 415 aa28.24■■■□□ 2.11
SPNS3-203ENST00000575185 KNSTRNQ9Y448 316 aa28.24■■■□□ 2.11
SPNS3-203ENST00000575185 ZC3H4Q9UPT8 1303 aaKnown RBP28.23■■■□□ 2.11
SPNS3-203ENST00000575185 SCN7AQ01118 1682 aa28.23■■■□□ 2.11
SPNS3-203ENST00000575185 LMNB1P20700 586 aa28.23■■■□□ 2.11
SPNS3-203ENST00000575185 C2CD5Q86YS7 1000 aa28.21■■■□□ 2.11
SPNS3-203ENST00000575185 GLTPD2A6NH11 291 aa28.2■■■□□ 2.1
SPNS3-203ENST00000575185 NFKBIEO00221 500 aa28.2■■■□□ 2.1
SPNS3-203ENST00000575185 CANXP27824 592 aaKnown RBP28.2■■■□□ 2.1
SPNS3-203ENST00000575185 MTHFSDQ2M296 383 aaKnown RBP28.2■■■□□ 2.1
SPNS3-203ENST00000575185 AMER1Q5JTC6 1135 aaPredicted RBP28.2■■■□□ 2.1
SPNS3-203ENST00000575185 TTLL6Q8N841 843 aa28.2■■■□□ 2.1
SPNS3-203ENST00000575185 CACNA1SQ13698 1873 aa28.2■■■□□ 2.1
SPNS3-203ENST00000575185 BICDL1Q6ZP65 573 aa28.19■■■□□ 2.1
SPNS3-203ENST00000575185 DICER1Q9UPY3 1922 aaKnown RBP28.19■■■□□ 2.1
SPNS3-203ENST00000575185 CAPN15O75808 1086 aa28.18■■■□□ 2.1
SPNS3-203ENST00000575185 SIPA1L3O60292 1781 aaPredicted RBP28.18■■■□□ 2.1
SPNS3-203ENST00000575185 FER1L6Q2WGJ9 1857 aa28.18■■■□□ 2.1
SPNS3-203ENST00000575185 VEGFAP15692 232 aaPredicted RBP28.17■■■□□ 2.1
SPNS3-203ENST00000575185 VSIG10Q8N0Z9 540 aa28.16■■■□□ 2.1
SPNS3-203ENST00000575185 H0YIN7 160 aa28.15■■■□□ 2.1
SPNS3-203ENST00000575185 CCDC24Q8N4L8 307 aa28.14■■■□□ 2.1
SPNS3-203ENST00000575185 POTECB2RU33 542 aa28.13■■■□□ 2.09
SPNS3-203ENST00000575185 EIF5P55010 431 aaKnown RBP28.13■■■□□ 2.09
SPNS3-203ENST00000575185 TBC1D9BQ66K14 1250 aa28.13■■■□□ 2.09
SPNS3-203ENST00000575185 TNS4Q8IZW8 715 aa28.13■■■□□ 2.09
SPNS3-203ENST00000575185 ZNF219Q9P2Y4 722 aaPredicted RBP28.13■■■□□ 2.09
SPNS3-203ENST00000575185 BCORQ6W2J9 1755 aa28.1■■■□□ 2.09
SPNS3-203ENST00000575185 HSPA1AP0DMV8 641 aaKnown RBP28.1■■■□□ 2.09
SPNS3-203ENST00000575185 HSPA1BP0DMV9 641 aaKnown RBP28.1■■■□□ 2.09
SPNS3-203ENST00000575185 ZNF622Q969S3 477 aaKnown RBP eCLIP28.1■■■□□ 2.09
SPNS3-203ENST00000575185 SLX4Q8IY92 1834 aa28.09■■■□□ 2.09
SPNS3-203ENST00000575185 TTC5Q8N0Z6 440 aa28.09■■■□□ 2.09
SPNS3-203ENST00000575185 ZNF496Q96IT1 587 aaPredicted RBP28.09■■■□□ 2.09
SPNS3-203ENST00000575185 ZNF330Q9Y3S2 320 aaPredicted RBP28.09■■■□□ 2.09
SPNS3-203ENST00000575185 ARFGEF2Q9Y6D5 1785 aa28.09■■■□□ 2.09
SPNS3-203ENST00000575185 COL3A1P02461 1466 aaPredicted RBP28.08■■■□□ 2.09
SPNS3-203ENST00000575185 C21orf2O43822 256 aa28.08■■■□□ 2.09
SPNS3-203ENST00000575185 DIAPH1O60610 1272 aaKnown RBP28.08■■■□□ 2.09
SPNS3-203ENST00000575185 STARD3NLO95772 234 aa28.08■■■□□ 2.09
SPNS3-203ENST00000575185 PRR5LQ6MZQ0 368 aa28.07■■■□□ 2.08
SPNS3-203ENST00000575185 TBC1D2BQ9UPU7 963 aa28.07■■■□□ 2.08
SPNS3-203ENST00000575185 KIF7Q2M1P5 1343 aa28.07■■■□□ 2.08
SPNS3-203ENST00000575185 HEG1Q9ULI3 1381 aa28.07■■■□□ 2.08
SPNS3-203ENST00000575185 A0A087WZG4 1122 aa28.05■■■□□ 2.08
SPNS3-203ENST00000575185 CC2D1BQ5T0F9 858 aaKnown RBP28.05■■■□□ 2.08
SPNS3-203ENST00000575185 BRIP1Q9BX63 1249 aa28.05■■■□□ 2.08
SPNS3-203ENST00000575185 ERFEQ4G0M1 354 aa28.04■■■□□ 2.08
SPNS3-203ENST00000575185 IL17REQ8NFR9 667 aa28.04■■■□□ 2.08
SPNS3-203ENST00000575185 PDE6BP35913 854 aa28.03■■■□□ 2.08
SPNS3-203ENST00000575185 ZNF790Q6PG37 636 aa28.03■■■□□ 2.08
SPNS3-203ENST00000575185 TEFQ10587 303 aa28.02■■■□□ 2.08
SPNS3-203ENST00000575185 DPY19L2Q6NUT2 758 aa28.02■■■□□ 2.08
SPNS3-203ENST00000575185 POTEIP0CG38 1075 aa28.01■■■□□ 2.07
SPNS3-203ENST00000575185 POTEJP0CG39 1038 aa28.01■■■□□ 2.07
SPNS3-203ENST00000575185 PER1O15534 1290 aaPredicted RBP28■■■□□ 2.07
SPNS3-203ENST00000575185 A1BGP04217 495 aa28■■■□□ 2.07
SPNS3-203ENST00000575185 IL6STP40189 918 aaPredicted RBP27.99■■■□□ 2.07
SPNS3-203ENST00000575185 TAOK3Q9H2K8 898 aa27.99■■■□□ 2.07
SPNS3-203ENST00000575185 GNAT3A8MTJ3 354 aa27.98■■■□□ 2.07
SPNS3-203ENST00000575185 U2SURPO15042 1029 aaKnown RBP27.98■■■□□ 2.07
SPNS3-203ENST00000575185 CAMTA2O94983 1202 aa27.98■■■□□ 2.07
SPNS3-203ENST00000575185 CNGB1Q14028 1251 aaPredicted RBP27.98■■■□□ 2.07
SPNS3-203ENST00000575185 CNBD1Q8NA66 436 aa27.98■■■□□ 2.07
SPNS3-203ENST00000575185 PDZRN3Q9UPQ7 1066 aa27.98■■■□□ 2.07
SPNS3-203ENST00000575185 LTBP3Q9NS15 1303 aa27.97■■■□□ 2.07
SPNS3-203ENST00000575185 DDNO94850 711 aaPredicted RBP27.97■■■□□ 2.07
SPNS3-203ENST00000575185 PRPF40BQ6NWY9 871 aaKnown RBP27.97■■■□□ 2.07
SPNS3-203ENST00000575185 KCNQ3O43525 872 aa27.96■■■□□ 2.07
SPNS3-203ENST00000575185 CHADLQ6NUI6 762 aa27.96■■■□□ 2.07
SPNS3-203ENST00000575185 SETDB2Q96T68 719 aa27.96■■■□□ 2.07
SPNS3-203ENST00000575185 TEX13AQ9BXU3 409 aaPredicted RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms