RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 ITGB4P16144 1822 aa17.57■□□□□ 0.4
ERCC4-207ENST00000575156 KAT6BQ8WYB5 2073 aa17.56■□□□□ 0.4
ERCC4-207ENST00000575156 DOT1LQ8TEK3 1739 aa17.56■□□□□ 0.4
ERCC4-207ENST00000575156 PIP4K2AP48426 406 aaPredicted RBP17.56■□□□□ 0.4
ERCC4-207ENST00000575156 PDIA6Q15084 440 aa17.56■□□□□ 0.4
ERCC4-207ENST00000575156 FAM182BQ5T319 152 aa17.56■□□□□ 0.4
ERCC4-207ENST00000575156 THSD7AQ9UPZ6 1657 aa17.55■□□□□ 0.4
ERCC4-207ENST00000575156 FKBP5Q13451 457 aaPredicted RBP17.55■□□□□ 0.4
ERCC4-207ENST00000575156 DBF4Q9UBU7 674 aaPredicted RBP17.55■□□□□ 0.4
ERCC4-207ENST00000575156 UBR2Q8IWV8 1755 aa17.54■□□□□ 0.4
ERCC4-207ENST00000575156 KCNQ2O43526 872 aa17.54■□□□□ 0.4
ERCC4-207ENST00000575156 DDX19BQ9UMR2 479 aa17.54■□□□□ 0.4
ERCC4-207ENST00000575156 ONECUT3O60422 494 aaPredicted RBP17.53■□□□□ 0.4
ERCC4-207ENST00000575156 FBXO41Q8TF61 875 aa17.53■□□□□ 0.4
ERCC4-207ENST00000575156 SLC4A10Q6U841 1118 aa17.52■□□□□ 0.4
ERCC4-207ENST00000575156 SEPT12Q8IYM1 358 aa17.52■□□□□ 0.4
ERCC4-207ENST00000575156 DDX21Q9NR30 783 aaKnown RBP eCLIP17.52■□□□□ 0.4
ERCC4-207ENST00000575156 PCDHB15Q9Y5E8 787 aa17.52■□□□□ 0.4
ERCC4-207ENST00000575156 MYL6BP14649 208 aa17.52■□□□□ 0.39
ERCC4-207ENST00000575156 INTS3Q68E01 1043 aaKnown RBP17.52■□□□□ 0.39
ERCC4-207ENST00000575156 SLC4A9Q96Q91 983 aa17.52■□□□□ 0.39
ERCC4-207ENST00000575156 RBM42Q9BTD8 480 aaKnown RBP17.52■□□□□ 0.39
ERCC4-207ENST00000575156 ZBTB7BO15156 539 aaPredicted RBP17.51■□□□□ 0.39
ERCC4-207ENST00000575156 PTF1AQ7RTS3 328 aa17.51■□□□□ 0.39
ERCC4-207ENST00000575156 CHMP4AQ9BY43 222 aa17.51■□□□□ 0.39
ERCC4-207ENST00000575156 ZBTB40Q9NUA8 1239 aa17.51■□□□□ 0.39
ERCC4-207ENST00000575156 EP400Q96L91 3159 aa17.51■□□□□ 0.39
ERCC4-207ENST00000575156 LRP10Q7Z4F1 713 aa17.5■□□□□ 0.39
ERCC4-207ENST00000575156 A1BGP04217 495 aa17.49■□□□□ 0.39
ERCC4-207ENST00000575156 AIMP1Q12904 312 aaKnown RBP17.49■□□□□ 0.39
ERCC4-207ENST00000575156 DNAJC10Q8IXB1 793 aa17.49■□□□□ 0.39
ERCC4-207ENST00000575156 CACNA1FO60840 1977 aa17.49■□□□□ 0.39
ERCC4-207ENST00000575156 PI4KAP2A4QPH2 592 aa17.49■□□□□ 0.39
ERCC4-207ENST00000575156 NBPF26B4DH59 902 aa17.49■□□□□ 0.39
ERCC4-207ENST00000575156 IGHDP01880 384 aa17.49■□□□□ 0.39
ERCC4-207ENST00000575156 NBPF14Q5TI25 921 aa17.49■□□□□ 0.39
ERCC4-207ENST00000575156 NBPF10Q6P3W6 841 aaKnown RBP17.49■□□□□ 0.39
ERCC4-207ENST00000575156 NBPF15Q8N660 670 aa17.49■□□□□ 0.39
ERCC4-207ENST00000575156 PI4KAP1Q8N8J0 262 aa17.49■□□□□ 0.39
ERCC4-207ENST00000575156 HYPKQ9NX55 129 aa17.49■□□□□ 0.39
ERCC4-207ENST00000575156 C1orf115Q9H7X2 142 aa17.48■□□□□ 0.39
ERCC4-207ENST00000575156 ADCY9O60503 1353 aa17.48■□□□□ 0.39
ERCC4-207ENST00000575156 KDM2BQ8NHM5 1336 aa17.47■□□□□ 0.39
ERCC4-207ENST00000575156 XAGE3Q8WTP9 111 aa17.47■□□□□ 0.39
ERCC4-207ENST00000575156 LAMB4A4D0S4 1761 aa17.47■□□□□ 0.39
ERCC4-207ENST00000575156 COPS6Q7L5N1 327 aa17.46■□□□□ 0.39
ERCC4-207ENST00000575156 CCT4P50991 539 aaKnown RBP17.46■□□□□ 0.39
ERCC4-207ENST00000575156 AAMPQ13685 434 aa17.46■□□□□ 0.39
ERCC4-207ENST00000575156 VSIG10Q8N0Z9 540 aa17.46■□□□□ 0.39
ERCC4-207ENST00000575156 MEIS3Q99687 375 aa17.46■□□□□ 0.39
ERCC4-207ENST00000575156 ZNF772Q68DY9 489 aaPredicted RBP17.45■□□□□ 0.38
ERCC4-207ENST00000575156 DNAAF4Q8WXU2 420 aa17.45■□□□□ 0.38
ERCC4-207ENST00000575156 MAP3K2Q9Y2U5 619 aa17.45■□□□□ 0.38
ERCC4-207ENST00000575156 KSR2Q6VAB6 950 aa17.44■□□□□ 0.38
ERCC4-207ENST00000575156 SKAP1Q86WV1 359 aa17.44■□□□□ 0.38
ERCC4-207ENST00000575156 PALLDQ8WX93 1383 aa17.44■□□□□ 0.38
ERCC4-207ENST00000575156 BEND3Q5T5X7 828 aa17.43■□□□□ 0.38
ERCC4-207ENST00000575156 CYP19A1P11511 503 aaPredicted RBP17.43■□□□□ 0.38
ERCC4-207ENST00000575156 RGS17Q9UGC6 210 aaPredicted RBP17.43■□□□□ 0.38
ERCC4-207ENST00000575156 LOC102724428A0A0B4J2F2 783 aa17.42■□□□□ 0.38
ERCC4-207ENST00000575156 SIK1P57059 783 aa17.42■□□□□ 0.38
ERCC4-207ENST00000575156 RBM6P78332 1123 aaKnown RBP17.42■□□□□ 0.38
ERCC4-207ENST00000575156 ERBB4Q15303 1308 aa17.42■□□□□ 0.38
ERCC4-207ENST00000575156 PXDNLA1KZ92 1463 aa17.42■□□□□ 0.38
ERCC4-207ENST00000575156 STARD3NLO95772 234 aa17.41■□□□□ 0.38
ERCC4-207ENST00000575156 TTLL7Q6ZT98 887 aa17.41■□□□□ 0.38
ERCC4-207ENST00000575156 CENPQQ7L2Z9 268 aaPredicted RBP17.41■□□□□ 0.38
ERCC4-207ENST00000575156 TEX13AQ9BXU3 409 aaPredicted RBP17.41■□□□□ 0.38
ERCC4-207ENST00000575156 ITPK1Q13572 414 aa17.41■□□□□ 0.38
ERCC4-207ENST00000575156 SRCIN1Q9C0H9 1055 aa17.41■□□□□ 0.38
ERCC4-207ENST00000575156 DDX58O95786 925 aaKnown RBP17.4■□□□□ 0.38
ERCC4-207ENST00000575156 ATP6V1AP38606 617 aa17.4■□□□□ 0.38
ERCC4-207ENST00000575156 KCNQ4P56696 695 aa17.4■□□□□ 0.38
ERCC4-207ENST00000575156 RIC3Q7Z5B4 369 aa17.4■□□□□ 0.38
ERCC4-207ENST00000575156 CWF19L2Q2TBE0 894 aaKnown RBP17.4■□□□□ 0.38
ERCC4-207ENST00000575156 ANKRD13DQ6ZTN6 518 aa17.4■□□□□ 0.38
ERCC4-207ENST00000575156 KRT27Q7Z3Y8 459 aa17.4■□□□□ 0.38
ERCC4-207ENST00000575156 SIRT2Q8IXJ6 389 aa17.4■□□□□ 0.38
ERCC4-207ENST00000575156 USP44Q9H0E7 712 aa17.4■□□□□ 0.38
ERCC4-207ENST00000575156 CHMP4BQ9H444 224 aaKnown RBP17.4■□□□□ 0.38
ERCC4-207ENST00000575156 ZNF330Q9Y3S2 320 aaPredicted RBP17.4■□□□□ 0.38
ERCC4-207ENST00000575156 TJP1Q07157 1748 aa17.39■□□□□ 0.38
ERCC4-207ENST00000575156 SMARCC1Q92922 1105 aaPredicted RBP17.39■□□□□ 0.37
ERCC4-207ENST00000575156 ZBTB1Q9Y2K1 713 aa17.39■□□□□ 0.37
ERCC4-207ENST00000575156 BRWD3Q6RI45 1802 aa17.39■□□□□ 0.37
ERCC4-207ENST00000575156 ATP10DQ9P241 1426 aa17.38■□□□□ 0.37
ERCC4-207ENST00000575156 IGKV5-2P06315 115 aa17.38■□□□□ 0.37
ERCC4-207ENST00000575156 POTEAQ6S8J7 498 aa17.38■□□□□ 0.37
ERCC4-207ENST00000575156 RWDD1Q9H446 243 aaPredicted RBP17.38■□□□□ 0.37
ERCC4-207ENST00000575156 NHSQ6T4R5 1651 aa17.38■□□□□ 0.37
ERCC4-207ENST00000575156 HDAC1Q13547 482 aaPredicted RBP17.37■□□□□ 0.37
ERCC4-207ENST00000575156 N4BP2Q86UW6 1770 aaPredicted RBP17.37■□□□□ 0.37
ERCC4-207ENST00000575156 RXRBP28702 533 aa17.36■□□□□ 0.37
ERCC4-207ENST00000575156 MYD88Q99836 296 aa17.36■□□□□ 0.37
ERCC4-207ENST00000575156 METTL22Q9BUU2 404 aaPredicted RBP17.36■□□□□ 0.37
ERCC4-207ENST00000575156 BTAF1O14981 1849 aa17.36■□□□□ 0.37
ERCC4-207ENST00000575156 NBPF7P0C2Y1 421 aaPredicted RBP17.36■□□□□ 0.37
ERCC4-207ENST00000575156 INTS5Q6P9B9 1019 aaKnown RBP17.36■□□□□ 0.37
ERCC4-207ENST00000575156 PLBD2Q8NHP8 589 aa17.36■□□□□ 0.37
ERCC4-207ENST00000575156 ZBTB3Q9H5J0 574 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms