RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 RALBP1Q15311 655 aa14.07□□□□□ -0.16
LITAF-216ENST00000574848 TTC5Q8N0Z6 440 aa14.07□□□□□ -0.16
LITAF-216ENST00000574848 KDM3BQ7LBC6 1761 aa14.06□□□□□ -0.16
LITAF-216ENST00000574848 GRIN3BO60391 1043 aa14.06□□□□□ -0.16
LITAF-216ENST00000574848 ZNF496Q96IT1 587 aaPredicted RBP14.06□□□□□ -0.16
LITAF-216ENST00000574848 ZBTB1Q9Y2K1 713 aa14.06□□□□□ -0.16
LITAF-216ENST00000574848 LAMB4A4D0S4 1761 aa14.06□□□□□ -0.16
LITAF-216ENST00000574848 BCORQ6W2J9 1755 aa14.06□□□□□ -0.16
LITAF-216ENST00000574848 N4BP2Q86UW6 1770 aaPredicted RBP14.06□□□□□ -0.16
LITAF-216ENST00000574848 PLEKHF1Q96S99 279 aa14.05□□□□□ -0.16
LITAF-216ENST00000574848 SRP68Q9UHB9 627 aaKnown RBP14.05□□□□□ -0.16
LITAF-216ENST00000574848 TGFB2P61812 414 aa14.04□□□□□ -0.16
LITAF-216ENST00000574848 FKBP8Q14318 412 aa14.04□□□□□ -0.16
LITAF-216ENST00000574848 FMNL2Q96PY5 1086 aa14.04□□□□□ -0.16
LITAF-216ENST00000574848 TEX13AQ9BXU3 409 aaPredicted RBP14.04□□□□□ -0.16
LITAF-216ENST00000574848 AFDNP55196 1824 aaKnown RBP14.04□□□□□ -0.16
LITAF-216ENST00000574848 BTBD11A6QL63 1104 aa14.03□□□□□ -0.16
LITAF-216ENST00000574848 STARD3NLO95772 234 aa14.03□□□□□ -0.16
LITAF-216ENST00000574848 EIF5P55010 431 aaKnown RBP14.03□□□□□ -0.16
LITAF-216ENST00000574848 DDR1Q08345 913 aa14.03□□□□□ -0.16
LITAF-216ENST00000574848 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
LITAF-216ENST00000574848 ZNF784Q8NCA9 323 aaPredicted RBP14.03□□□□□ -0.16
LITAF-216ENST00000574848 RTF1Q92541 710 aaKnown RBP14.03□□□□□ -0.16
LITAF-216ENST00000574848 YTHDC1Q96MU7 727 aaKnown RBP14.03□□□□□ -0.16
LITAF-216ENST00000574848 NARFQ9UHQ1 456 aa14.03□□□□□ -0.16
LITAF-216ENST00000574848 PARP3Q9Y6F1 533 aa14.03□□□□□ -0.16
LITAF-216ENST00000574848 DLEC1Q9Y238 1755 aa14.03□□□□□ -0.16
LITAF-216ENST00000574848 ARFGEF1Q9Y6D6 1849 aa14.03□□□□□ -0.16
LITAF-216ENST00000574848 ADCY9O60503 1353 aa14.02□□□□□ -0.17
LITAF-216ENST00000574848 MYBBP1AQ9BQG0 1328 aaKnown RBP14.02□□□□□ -0.17
LITAF-216ENST00000574848 TM4SF1P30408 202 aa14.02□□□□□ -0.17
LITAF-216ENST00000574848 MCM10Q7L590 875 aa14.02□□□□□ -0.17
LITAF-216ENST00000574848 POLRMTO00411 1230 aaKnown RBP14.01□□□□□ -0.17
LITAF-216ENST00000574848 ZPR1O75312 459 aa14.01□□□□□ -0.17
LITAF-216ENST00000574848 USPL1Q5W0Q7 1092 aa14.01□□□□□ -0.17
LITAF-216ENST00000574848 BCL2L12Q9HB09 334 aa14.01□□□□□ -0.17
LITAF-216ENST00000574848 KCNQ3O43525 872 aa14□□□□□ -0.17
LITAF-216ENST00000574848 NEFMP07197 916 aa14□□□□□ -0.17
LITAF-216ENST00000574848 IL6STP40189 918 aaPredicted RBP14□□□□□ -0.17
LITAF-216ENST00000574848 NFE2L2Q16236 605 aa14□□□□□ -0.17
LITAF-216ENST00000574848 PNNQ9H307 717 aaKnown RBP14□□□□□ -0.17
LITAF-216ENST00000574848 A0A087WZG4 1122 aa13.99□□□□□ -0.17
LITAF-216ENST00000574848 DCTN1Q14203 1278 aa13.99□□□□□ -0.17
LITAF-216ENST00000574848 CANXP27824 592 aaKnown RBP13.98□□□□□ -0.17
LITAF-216ENST00000574848 NFIXQ14938 502 aa13.98□□□□□ -0.17
LITAF-216ENST00000574848 MAPK8IP3Q9UPT6 1336 aa13.97□□□□□ -0.17
LITAF-216ENST00000574848 SNRPA1P09661 255 aaKnown RBP13.97□□□□□ -0.17
LITAF-216ENST00000574848 DPEP1P16444 411 aa13.97□□□□□ -0.17
LITAF-216ENST00000574848 KCNA3P22001 575 aa13.97□□□□□ -0.17
LITAF-216ENST00000574848 TAF7Q15545 349 aaPredicted RBP13.97□□□□□ -0.17
LITAF-216ENST00000574848 ANKRD31Q8N7Z5 1873 aa13.97□□□□□ -0.17
LITAF-216ENST00000574848 A0A0G2JLW4 131 aa13.96□□□□□ -0.17
LITAF-216ENST00000574848 PNISRQ8TF01 805 aaKnown RBP13.96□□□□□ -0.17
LITAF-216ENST00000574848 RGL2O15211 777 aa13.95□□□□□ -0.18
LITAF-216ENST00000574848 CAMTA2O94983 1202 aa13.95□□□□□ -0.18
LITAF-216ENST00000574848 A1BGP04217 495 aa13.95□□□□□ -0.18
LITAF-216ENST00000574848 PRKRIP1Q9H875 184 aaPredicted RBP13.95□□□□□ -0.18
LITAF-216ENST00000574848 USP16Q9Y5T5 823 aa13.95□□□□□ -0.18
LITAF-216ENST00000574848 ATP10DQ9P241 1426 aa13.95□□□□□ -0.18
LITAF-216ENST00000574848 COL11A2P13942 1736 aaPredicted RBP13.95□□□□□ -0.18
LITAF-216ENST00000574848 CARMIL3Q8ND23 1372 aa13.95□□□□□ -0.18
LITAF-216ENST00000574848 PRAMEF22A3QJZ6 481 aa13.94□□□□□ -0.18
LITAF-216ENST00000574848 SERPINB2P05120 415 aa13.93□□□□□ -0.18
LITAF-216ENST00000574848 WWC3Q9ULE0 1092 aa13.93□□□□□ -0.18
LITAF-216ENST00000574848 ARFGEF2Q9Y6D5 1785 aa13.92□□□□□ -0.18
LITAF-216ENST00000574848 EIF4A1P60842 406 aaKnown RBP13.92□□□□□ -0.18
LITAF-216ENST00000574848 TBC1D9BQ66K14 1250 aa13.92□□□□□ -0.18
LITAF-216ENST00000574848 BABAM1Q9NWV8 329 aa13.92□□□□□ -0.18
LITAF-216ENST00000574848 PIM2Q9P1W9 311 aa13.92□□□□□ -0.18
LITAF-216ENST00000574848 BCS1LQ9Y276 419 aa13.92□□□□□ -0.18
LITAF-216ENST00000574848 NBPF26B4DH59 902 aa13.91□□□□□ -0.18
LITAF-216ENST00000574848 GIGYF1O75420 1035 aaPredicted RBP13.91□□□□□ -0.18
LITAF-216ENST00000574848 TMPOP42166 694 aaKnown RBP13.91□□□□□ -0.18
LITAF-216ENST00000574848 LMOD3Q0VAK6 560 aa13.91□□□□□ -0.18
LITAF-216ENST00000574848 NBPF10Q6P3W6 841 aaKnown RBP13.91□□□□□ -0.18
LITAF-216ENST00000574848 CLEC4GQ6UXB4 293 aa13.91□□□□□ -0.18
LITAF-216ENST00000574848 DZIP3Q86Y13 1208 aaKnown RBP13.91□□□□□ -0.18
LITAF-216ENST00000574848 NBPF15Q8N660 670 aa13.91□□□□□ -0.18
LITAF-216ENST00000574848 THUMPD2Q9BTF0 503 aaKnown RBP13.91□□□□□ -0.18
LITAF-216ENST00000574848 TBC1D2BQ9UPU7 963 aa13.91□□□□□ -0.18
LITAF-216ENST00000574848 CHRNA5P30532 468 aa13.9□□□□□ -0.18
LITAF-216ENST00000574848 DALRD3Q5D0E6 543 aaKnown RBP13.9□□□□□ -0.18
LITAF-216ENST00000574848 NPM2Q86SE8 214 aaKnown RBP13.9□□□□□ -0.18
LITAF-216ENST00000574848 MIS18AQ9NYP9 233 aa13.9□□□□□ -0.18
LITAF-216ENST00000574848 ZNF330Q9Y3S2 320 aaPredicted RBP13.9□□□□□ -0.18
LITAF-216ENST00000574848 ERBB4Q15303 1308 aa13.9□□□□□ -0.19
LITAF-216ENST00000574848 PIP4K2AP48426 406 aaPredicted RBP13.89□□□□□ -0.19
LITAF-216ENST00000574848 RIPK4P57078 832 aa13.89□□□□□ -0.19
LITAF-216ENST00000574848 PRR5LQ6MZQ0 368 aa13.89□□□□□ -0.19
LITAF-216ENST00000574848 PDZRN3Q9UPQ7 1066 aa13.89□□□□□ -0.19
LITAF-216ENST00000574848 WDR43Q15061 677 aaKnown RBP eCLIP13.88□□□□□ -0.19
LITAF-216ENST00000574848 RUNDC1Q96C34 613 aa13.88□□□□□ -0.19
LITAF-216ENST00000574848 ZNF652Q9Y2D9 606 aa13.88□□□□□ -0.19
LITAF-216ENST00000574848 SBF1O95248 1867 aa13.88□□□□□ -0.19
LITAF-216ENST00000574848 NUP98P52948 1817 aa13.87□□□□□ -0.19
LITAF-216ENST00000574848 BICDL1Q6ZP65 573 aa13.87□□□□□ -0.19
LITAF-216ENST00000574848 SETDB2Q96T68 719 aa13.87□□□□□ -0.19
LITAF-216ENST00000574848 BRIP1Q9BX63 1249 aa13.87□□□□□ -0.19
LITAF-216ENST00000574848 CNBD1Q8NA66 436 aa13.86□□□□□ -0.19
LITAF-216ENST00000574848 TSPYL4Q9UJ04 414 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms