RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 ADAMTS7Q9UKP4 1686 aa20.46■□□□□ 0.87
CTNS-209ENST00000574776 CANXP27824 592 aaKnown RBP20.46■□□□□ 0.87
CTNS-209ENST00000574776 CHRNA5P30532 468 aa20.46■□□□□ 0.87
CTNS-209ENST00000574776 TEFQ10587 303 aa20.46■□□□□ 0.87
CTNS-209ENST00000574776 GAS2L2Q8NHY3 880 aa20.46■□□□□ 0.87
CTNS-209ENST00000574776 NFIXQ14938 502 aa20.45■□□□□ 0.86
CTNS-209ENST00000574776 DALRD3Q5D0E6 543 aaKnown RBP20.45■□□□□ 0.86
CTNS-209ENST00000574776 STARD3NLO95772 234 aa20.44■□□□□ 0.86
CTNS-209ENST00000574776 ZNF496Q96IT1 587 aaPredicted RBP20.44■□□□□ 0.86
CTNS-209ENST00000574776 PHACTR3Q96KR7 559 aa20.44■□□□□ 0.86
CTNS-209ENST00000574776 BCL2L12Q9HB09 334 aa20.44■□□□□ 0.86
CTNS-209ENST00000574776 COL15A1P39059 1388 aa20.44■□□□□ 0.86
CTNS-209ENST00000574776 BRCA1P38398 1863 aaKnown RBP20.43■□□□□ 0.86
CTNS-209ENST00000574776 KIF3CO14782 793 aa20.43■□□□□ 0.86
CTNS-209ENST00000574776 ZNF790Q6PG37 636 aa20.43■□□□□ 0.86
CTNS-209ENST00000574776 CFAP53Q96M91 514 aa20.43■□□□□ 0.86
CTNS-209ENST00000574776 SERPINB2P05120 415 aa20.41■□□□□ 0.86
CTNS-209ENST00000574776 PRKAR2BP31323 418 aa20.41■□□□□ 0.86
CTNS-209ENST00000574776 C9orf131Q5VYM1 1079 aa20.41■□□□□ 0.86
CTNS-209ENST00000574776 EIF5P55010 431 aaKnown RBP20.4■□□□□ 0.86
CTNS-209ENST00000574776 CEP350Q5VT06 3117 aa20.4■□□□□ 0.86
CTNS-209ENST00000574776 TEX13AQ9BXU3 409 aaPredicted RBP20.4■□□□□ 0.86
CTNS-209ENST00000574776 RSPH6AQ9H0K4 717 aa20.4■□□□□ 0.86
CTNS-209ENST00000574776 NUDCQ9Y266 331 aa20.4■□□□□ 0.86
CTNS-209ENST00000574776 UBR2Q8IWV8 1755 aa20.39■□□□□ 0.86
CTNS-209ENST00000574776 HEG1Q9ULI3 1381 aa20.39■□□□□ 0.85
CTNS-209ENST00000574776 HSPA6P17066 643 aa20.39■□□□□ 0.85
CTNS-209ENST00000574776 PPP2R1AP30153 589 aa20.39■□□□□ 0.85
CTNS-209ENST00000574776 BICDL1Q6ZP65 573 aa20.39■□□□□ 0.85
CTNS-209ENST00000574776 ARFGEF1Q9Y6D6 1849 aa20.39■□□□□ 0.85
CTNS-209ENST00000574776 A0A087WZG4 1122 aa20.38■□□□□ 0.85
CTNS-209ENST00000574776 KCNQ3O43525 872 aa20.38■□□□□ 0.85
CTNS-209ENST00000574776 U2AF1L5P0DN76 240 aaPredicted RBP20.38■□□□□ 0.85
CTNS-209ENST00000574776 U2AF1Q01081 240 aaKnown RBP eCLIP20.38■□□□□ 0.85
CTNS-209ENST00000574776 AFDNP55196 1824 aaKnown RBP20.37■□□□□ 0.85
CTNS-209ENST00000574776 BTBD11A6QL63 1104 aa20.37■□□□□ 0.85
CTNS-209ENST00000574776 FMNL2Q96PY5 1086 aa20.37■□□□□ 0.85
CTNS-209ENST00000574776 NMRK2Q9NPI5 230 aa20.37■□□□□ 0.85
CTNS-209ENST00000574776 TBC1D2BQ9UPU7 963 aa20.37■□□□□ 0.85
CTNS-209ENST00000574776 ZNF330Q9Y3S2 320 aaPredicted RBP20.37■□□□□ 0.85
CTNS-209ENST00000574776 A1BGP04217 495 aa20.36■□□□□ 0.85
CTNS-209ENST00000574776 CEMIPQ8WUJ3 1361 aa20.35■□□□□ 0.85
CTNS-209ENST00000574776 RNF181Q9P0P0 153 aa20.35■□□□□ 0.85
CTNS-209ENST00000574776 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
CTNS-209ENST00000574776 TBC1D9BQ66K14 1250 aa20.34■□□□□ 0.85
CTNS-209ENST00000574776 C2CD5Q86YS7 1000 aa20.34■□□□□ 0.85
CTNS-209ENST00000574776 TOMM70O94826 608 aa20.33■□□□□ 0.85
CTNS-209ENST00000574776 IL6STP40189 918 aaPredicted RBP20.33■□□□□ 0.85
CTNS-209ENST00000574776 MCM10Q7L590 875 aa20.33■□□□□ 0.85
CTNS-209ENST00000574776 RTF1Q92541 710 aaKnown RBP20.33■□□□□ 0.85
CTNS-209ENST00000574776 H0YIN7 160 aa20.32■□□□□ 0.84
CTNS-209ENST00000574776 NPM2Q86SE8 214 aaKnown RBP20.32■□□□□ 0.84
CTNS-209ENST00000574776 TTLL6Q8N841 843 aa20.32■□□□□ 0.84
CTNS-209ENST00000574776 USP16Q9Y5T5 823 aa20.32■□□□□ 0.84
CTNS-209ENST00000574776 NRXN2Q9P2S2 1712 aa20.32■□□□□ 0.84
CTNS-209ENST00000574776 DCTN1Q14203 1278 aa20.31■□□□□ 0.84
CTNS-209ENST00000574776 CCDC24Q8N4L8 307 aa20.31■□□□□ 0.84
CTNS-209ENST00000574776 CARMIL3Q8ND23 1372 aa20.31■□□□□ 0.84
CTNS-209ENST00000574776 PRAMEF22A3QJZ6 481 aa20.3■□□□□ 0.84
CTNS-209ENST00000574776 RASSF7Q02833 373 aa20.3■□□□□ 0.84
CTNS-209ENST00000574776 SBF1O95248 1867 aa20.3■□□□□ 0.84
CTNS-209ENST00000574776 PIP4K2AP48426 406 aaPredicted RBP20.29■□□□□ 0.84
CTNS-209ENST00000574776 KDM2BQ8NHM5 1336 aa20.28■□□□□ 0.84
CTNS-209ENST00000574776 CAMTA2O94983 1202 aa20.28■□□□□ 0.84
CTNS-209ENST00000574776 C16orf71Q8IYS4 520 aaPredicted RBP20.28■□□□□ 0.84
CTNS-209ENST00000574776 ZNF622Q969S3 477 aaKnown RBP eCLIP20.28■□□□□ 0.84
CTNS-209ENST00000574776 SETDB2Q96T68 719 aa20.28■□□□□ 0.84
CTNS-209ENST00000574776 BRIP1Q9BX63 1249 aa20.28■□□□□ 0.84
CTNS-209ENST00000574776 RRAGCQ9HB90 399 aa20.28■□□□□ 0.84
CTNS-209ENST00000574776 SNRPA1P09661 255 aaKnown RBP20.27■□□□□ 0.84
CTNS-209ENST00000574776 PRELPP51888 382 aa20.27■□□□□ 0.84
CTNS-209ENST00000574776 PRR5LQ6MZQ0 368 aa20.27■□□□□ 0.84
CTNS-209ENST00000574776 DZIP3Q86Y13 1208 aaKnown RBP20.27■□□□□ 0.84
CTNS-209ENST00000574776 HTATSF1O43719 755 aaKnown RBP20.26■□□□□ 0.83
CTNS-209ENST00000574776 LMNB1P20700 586 aa20.26■□□□□ 0.83
CTNS-209ENST00000574776 PDE6BP35913 854 aa20.26■□□□□ 0.83
CTNS-209ENST00000574776 APLP1P51693 650 aa20.25■□□□□ 0.83
CTNS-209ENST00000574776 RBM46Q8TBY0 533 aaKnown RBP20.25■□□□□ 0.83
CTNS-209ENST00000574776 MIS18AQ9NYP9 233 aa20.25■□□□□ 0.83
CTNS-209ENST00000574776 ZNF219Q9P2Y4 722 aaPredicted RBP20.25■□□□□ 0.83
CTNS-209ENST00000574776 DLEC1Q9Y238 1755 aa20.24■□□□□ 0.83
CTNS-209ENST00000574776 NPHP1O15259 732 aa20.24■□□□□ 0.83
CTNS-209ENST00000574776 TAF7Q15545 349 aaPredicted RBP20.24■□□□□ 0.83
CTNS-209ENST00000574776 PDZRN3Q9UPQ7 1066 aa20.24■□□□□ 0.83
CTNS-209ENST00000574776 ANKRD31Q8N7Z5 1873 aa20.23■□□□□ 0.83
CTNS-209ENST00000574776 CNBD1Q8NA66 436 aa20.23■□□□□ 0.83
CTNS-209ENST00000574776 SCN7AQ01118 1682 aa20.22■□□□□ 0.83
CTNS-209ENST00000574776 NBPF26B4DH59 902 aa20.22■□□□□ 0.83
CTNS-209ENST00000574776 NFKBIEO00221 500 aa20.22■□□□□ 0.83
CTNS-209ENST00000574776 C21orf2O43822 256 aa20.22■□□□□ 0.83
CTNS-209ENST00000574776 NBPF10Q6P3W6 841 aaKnown RBP20.22■□□□□ 0.83
CTNS-209ENST00000574776 NBPF15Q8N660 670 aa20.22■□□□□ 0.83
CTNS-209ENST00000574776 NEFMP07197 916 aa20.21■□□□□ 0.83
CTNS-209ENST00000574776 CCDC88AQ3V6T2 1871 aa20.2■□□□□ 0.82
CTNS-209ENST00000574776 GLTPD2A6NH11 291 aa20.2■□□□□ 0.82
CTNS-209ENST00000574776 ST5P78524 1137 aa20.2■□□□□ 0.82
CTNS-209ENST00000574776 CLEC4GQ6UXB4 293 aa20.2■□□□□ 0.82
CTNS-209ENST00000574776 DNAJC5GQ8N7S2 189 aa20.2■□□□□ 0.82
CTNS-209ENST00000574776 FSTL1Q12841 308 aa20.19■□□□□ 0.82
CTNS-209ENST00000574776 ZC3H4Q9UPT8 1303 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms