RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 CHPF2Q9P2E5 772 aa9.23□□□□□ -0.93
RPA1-207ENST00000574049 ATF5Q9Y2D1 282 aaPredicted RBP9.23□□□□□ -0.93
RPA1-207ENST00000574049 MVPQ14764 893 aaKnown RBP9.23□□□□□ -0.93
RPA1-207ENST00000574049 FAM43AQ8N2R8 423 aa9.23□□□□□ -0.93
RPA1-207ENST00000574049 FBXW7Q969H0 707 aa9.23□□□□□ -0.93
RPA1-207ENST00000574049 CYP27B1O15528 508 aa9.22□□□□□ -0.93
RPA1-207ENST00000574049 DDB1Q16531 1140 aa9.22□□□□□ -0.93
RPA1-207ENST00000574049 TAF7LQ5H9L4 462 aa9.22□□□□□ -0.93
RPA1-207ENST00000574049 ZNF526Q8TF50 670 aaPredicted RBP9.22□□□□□ -0.93
RPA1-207ENST00000574049 HSPA1LP34931 641 aa9.22□□□□□ -0.93
RPA1-207ENST00000574049 MRPL50Q8N5N7 158 aaKnown RBP9.22□□□□□ -0.93
RPA1-207ENST00000574049 CHD2O14647 1828 aaKnown RBP9.22□□□□□ -0.93
RPA1-207ENST00000574049 PHKG2P15735 406 aa9.22□□□□□ -0.93
RPA1-207ENST00000574049 DRC7Q8IY82 874 aa9.21□□□□□ -0.93
RPA1-207ENST00000574049 TOMM22Q9NS69 142 aa9.21□□□□□ -0.93
RPA1-207ENST00000574049 WDR17Q8IZU2 1322 aa9.21□□□□□ -0.93
RPA1-207ENST00000574049 ITSN1Q15811 1721 aa9.21□□□□□ -0.93
RPA1-207ENST00000574049 SPDYE4A6NLX3 237 aa9.21□□□□□ -0.94
RPA1-207ENST00000574049 IGHDP01880 384 aa9.21□□□□□ -0.94
RPA1-207ENST00000574049 FLIIQ13045 1269 aa9.21□□□□□ -0.94
RPA1-207ENST00000574049 ZNF496Q96IT1 587 aaPredicted RBP9.21□□□□□ -0.94
RPA1-207ENST00000574049 GBP4Q96PP9 640 aa9.21□□□□□ -0.94
RPA1-207ENST00000574049 PCDHB15Q9Y5E8 787 aa9.21□□□□□ -0.94
RPA1-207ENST00000574049 XRN1Q8IZH2 1706 aaKnown RBP9.21□□□□□ -0.94
RPA1-207ENST00000574049 MYCNP04198 464 aaPredicted RBP9.21□□□□□ -0.94
RPA1-207ENST00000574049 KCNQ4P56696 695 aa9.21□□□□□ -0.94
RPA1-207ENST00000574049 IL1RAPL2Q9NP60 686 aa9.21□□□□□ -0.94
RPA1-207ENST00000574049 USP19O94966 1318 aa9.21□□□□□ -0.94
RPA1-207ENST00000574049 PI4KAP2A4QPH2 592 aa9.2□□□□□ -0.94
RPA1-207ENST00000574049 PRIM1P49642 420 aaKnown RBP9.2□□□□□ -0.94
RPA1-207ENST00000574049 PI4KAP1Q8N8J0 262 aa9.2□□□□□ -0.94
RPA1-207ENST00000574049 USP21Q9UK80 565 aa9.2□□□□□ -0.94
RPA1-207ENST00000574049 NALCNQ8IZF0 1738 aa9.2□□□□□ -0.94
RPA1-207ENST00000574049 SMARCA5O60264 1052 aaPredicted RBP9.2□□□□□ -0.94
RPA1-207ENST00000574049 CT47B1P0C2W7 299 aaPredicted RBP9.2□□□□□ -0.94
RPA1-207ENST00000574049 SEC24BO95487 1268 aa9.2□□□□□ -0.94
RPA1-207ENST00000574049 MCTP1Q6DN14 999 aa9.2□□□□□ -0.94
RPA1-207ENST00000574049 ZNF790Q6PG37 636 aa9.2□□□□□ -0.94
RPA1-207ENST00000574049 DCAF5Q96JK2 942 aa9.2□□□□□ -0.94
RPA1-207ENST00000574049 CCDC85AQ96PX6 553 aaPredicted RBP9.2□□□□□ -0.94
RPA1-207ENST00000574049 LARP6Q9BRS8 491 aaKnown RBP9.2□□□□□ -0.94
RPA1-207ENST00000574049 SURF6O75683 361 aaKnown RBP9.19□□□□□ -0.94
RPA1-207ENST00000574049 ALDH1L2Q3SY69 923 aa9.19□□□□□ -0.94
RPA1-207ENST00000574049 SIL1Q9H173 461 aa9.19□□□□□ -0.94
RPA1-207ENST00000574049 GPBP1L1Q9HC44 474 aaPredicted RBP9.19□□□□□ -0.94
RPA1-207ENST00000574049 USP16Q9Y5T5 823 aa9.19□□□□□ -0.94
RPA1-207ENST00000574049 COL3A1P02461 1466 aaPredicted RBP9.19□□□□□ -0.94
RPA1-207ENST00000574049 USP32Q8NFA0 1604 aa9.19□□□□□ -0.94
RPA1-207ENST00000574049 ATP5J2-PTCD1G3V325 749 aa9.19□□□□□ -0.94
RPA1-207ENST00000574049 CARD10Q9BWT7 1032 aa9.19□□□□□ -0.94
RPA1-207ENST00000574049 ZBTB3Q9H5J0 574 aa9.19□□□□□ -0.94
RPA1-207ENST00000574049 EXOC6BQ9Y2D4 811 aa9.19□□□□□ -0.94
RPA1-207ENST00000574049 HTATSF1O43719 755 aaKnown RBP9.19□□□□□ -0.94
RPA1-207ENST00000574049 ZNF853P0CG23 659 aa9.19□□□□□ -0.94
RPA1-207ENST00000574049 TSHZ3Q63HK5 1081 aa9.19□□□□□ -0.94
RPA1-207ENST00000574049 SLC52A2Q9HAB3 445 aa9.19□□□□□ -0.94
RPA1-207ENST00000574049 CIZ1Q9ULV3 898 aaPredicted RBP9.19□□□□□ -0.94
RPA1-207ENST00000574049 KNDC1Q76NI1 1749 aa9.18□□□□□ -0.94
RPA1-207ENST00000574049 EIF4A1P60842 406 aaKnown RBP9.18□□□□□ -0.94
RPA1-207ENST00000574049 MEIS3Q99687 375 aa9.18□□□□□ -0.94
RPA1-207ENST00000574049 ZNF142P52746 1687 aaPredicted RBP9.18□□□□□ -0.94
RPA1-207ENST00000574049 RTL1A6NKG5 1358 aa9.18□□□□□ -0.94
RPA1-207ENST00000574049 A1BGP04217 495 aa9.18□□□□□ -0.94
RPA1-207ENST00000574049 PROSER3Q2NL68 480 aa9.18□□□□□ -0.94
RPA1-207ENST00000574049 CCDC82Q8N4S0 544 aa9.18□□□□□ -0.94
RPA1-207ENST00000574049 FMNL2Q96PY5 1086 aa9.18□□□□□ -0.94
RPA1-207ENST00000574049 WDR70Q9NW82 654 aa9.18□□□□□ -0.94
RPA1-207ENST00000574049 TMCO4Q5TGY1 634 aa9.18□□□□□ -0.94
RPA1-207ENST00000574049 COPS6Q7L5N1 327 aa9.18□□□□□ -0.94
RPA1-207ENST00000574049 ASAP1Q9ULH1 1129 aa9.18□□□□□ -0.94
RPA1-207ENST00000574049 TRAK2O60296 914 aa9.17□□□□□ -0.94
RPA1-207ENST00000574049 NEXNQ0ZGT2 675 aa9.17□□□□□ -0.94
RPA1-207ENST00000574049 NEUROD6Q96NK8 337 aa9.17□□□□□ -0.94
RPA1-207ENST00000574049 UBTFL1P0CB47 393 aaPredicted RBP9.17□□□□□ -0.94
RPA1-207ENST00000574049 GTF2E1P29083 439 aaPredicted RBP9.17□□□□□ -0.94
RPA1-207ENST00000574049 XAGE3Q8WTP9 111 aa9.17□□□□□ -0.94
RPA1-207ENST00000574049 ADGRB2O60241 1585 aa9.17□□□□□ -0.94
RPA1-207ENST00000574049 DCCP43146 1447 aa9.17□□□□□ -0.94
RPA1-207ENST00000574049 PCDH11XQ9BZA7 1347 aa9.17□□□□□ -0.94
RPA1-207ENST00000574049 PCDH11YQ9BZA8 1340 aa9.17□□□□□ -0.94
RPA1-207ENST00000574049 ST18O60284 1047 aa9.17□□□□□ -0.94
RPA1-207ENST00000574049 DDX58O95786 925 aaKnown RBP9.17□□□□□ -0.94
RPA1-207ENST00000574049 CHMP4CQ96CF2 233 aa9.17□□□□□ -0.94
RPA1-207ENST00000574049 SRCIN1Q9C0H9 1055 aa9.17□□□□□ -0.94
RPA1-207ENST00000574049 DBF4Q9UBU7 674 aaPredicted RBP9.17□□□□□ -0.94
RPA1-207ENST00000574049 MAP3K2Q9Y2U5 619 aa9.17□□□□□ -0.94
RPA1-207ENST00000574049 KIF20BQ96Q89 1820 aa9.17□□□□□ -0.94
RPA1-207ENST00000574049 RNF123Q5XPI4 1314 aa9.16□□□□□ -0.94
RPA1-207ENST00000574049 SNRPA1P09661 255 aaKnown RBP9.16□□□□□ -0.94
RPA1-207ENST00000574049 MYD88Q99836 296 aa9.16□□□□□ -0.94
RPA1-207ENST00000574049 FMN2Q9NZ56 1722 aa9.16□□□□□ -0.94
RPA1-207ENST00000574049 CWF19L2Q2TBE0 894 aaKnown RBP9.16□□□□□ -0.94
RPA1-207ENST00000574049 CAVIN1Q6NZI2 390 aaKnown RBP9.16□□□□□ -0.94
RPA1-207ENST00000574049 PANK2Q9BZ23 570 aa9.16□□□□□ -0.94
RPA1-207ENST00000574049 NCOA3Q9Y6Q9 1424 aa9.16□□□□□ -0.94
RPA1-207ENST00000574049 GPTP24298 496 aa9.16□□□□□ -0.94
RPA1-207ENST00000574049 DIAPH3Q9NSV4 1193 aa9.16□□□□□ -0.94
RPA1-207ENST00000574049 KIF24Q5T7B8 1368 aa9.16□□□□□ -0.94
RPA1-207ENST00000574049 NEK4P51957 841 aa9.15□□□□□ -0.94
RPA1-207ENST00000574049 GNL2Q13823 731 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms