RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 CFAP53Q96M91 514 aa19.21■□□□□ 0.67
TVP23A-208ENST00000573857 UBR2Q8IWV8 1755 aa19.21■□□□□ 0.67
TVP23A-208ENST00000573857 FCHSD2O94868 740 aa19.2■□□□□ 0.66
TVP23A-208ENST00000573857 TEFQ10587 303 aa19.2■□□□□ 0.66
TVP23A-208ENST00000573857 RSPH6AQ9H0K4 717 aa19.19■□□□□ 0.66
TVP23A-208ENST00000573857 NARFQ9UHQ1 456 aa19.19■□□□□ 0.66
TVP23A-208ENST00000573857 BRCA1P38398 1863 aaKnown RBP19.18■□□□□ 0.66
TVP23A-208ENST00000573857 STARD3NLO95772 234 aa19.18■□□□□ 0.66
TVP23A-208ENST00000573857 PRKAR2BP31323 418 aa19.18■□□□□ 0.66
TVP23A-208ENST00000573857 ZNF790Q6PG37 636 aa19.18■□□□□ 0.66
TVP23A-208ENST00000573857 ARHGAP27Q6ZUM4 889 aa19.18■□□□□ 0.66
TVP23A-208ENST00000573857 ZNF496Q96IT1 587 aaPredicted RBP19.18■□□□□ 0.66
TVP23A-208ENST00000573857 PHACTR3Q96KR7 559 aa19.18■□□□□ 0.66
TVP23A-208ENST00000573857 PIM2Q9P1W9 311 aa19.18■□□□□ 0.66
TVP23A-208ENST00000573857 CEMIPQ8WUJ3 1361 aa19.18■□□□□ 0.66
TVP23A-208ENST00000573857 NFIXQ14938 502 aa19.17■□□□□ 0.66
TVP23A-208ENST00000573857 NUDCQ9Y266 331 aa19.17■□□□□ 0.66
TVP23A-208ENST00000573857 HEG1Q9ULI3 1381 aa19.17■□□□□ 0.66
TVP23A-208ENST00000573857 CANXP27824 592 aaKnown RBP19.16■□□□□ 0.66
TVP23A-208ENST00000573857 PPP2R1AP30153 589 aa19.16■□□□□ 0.66
TVP23A-208ENST00000573857 BCL2L12Q9HB09 334 aa19.16■□□□□ 0.66
TVP23A-208ENST00000573857 CHRNA5P30532 468 aa19.15■□□□□ 0.66
TVP23A-208ENST00000573857 DALRD3Q5D0E6 543 aaKnown RBP19.15■□□□□ 0.66
TVP23A-208ENST00000573857 SIPA1L3O60292 1781 aaPredicted RBP19.14■□□□□ 0.66
TVP23A-208ENST00000573857 U2AF1L5P0DN76 240 aaPredicted RBP19.14■□□□□ 0.65
TVP23A-208ENST00000573857 EIF5P55010 431 aaKnown RBP19.14■□□□□ 0.65
TVP23A-208ENST00000573857 U2AF1Q01081 240 aaKnown RBP eCLIP19.14■□□□□ 0.65
TVP23A-208ENST00000573857 TEX13AQ9BXU3 409 aaPredicted RBP19.14■□□□□ 0.65
TVP23A-208ENST00000573857 ARFGEF1Q9Y6D6 1849 aa19.12■□□□□ 0.65
TVP23A-208ENST00000573857 A0A087WZG4 1122 aa19.12■□□□□ 0.65
TVP23A-208ENST00000573857 KIF3CO14782 793 aa19.12■□□□□ 0.65
TVP23A-208ENST00000573857 FMNL2Q96PY5 1086 aa19.12■□□□□ 0.65
TVP23A-208ENST00000573857 NRXN2Q9P2S2 1712 aa19.11■□□□□ 0.65
TVP23A-208ENST00000573857 BTBD11A6QL63 1104 aa19.11■□□□□ 0.65
TVP23A-208ENST00000573857 SERPINB2P05120 415 aa19.11■□□□□ 0.65
TVP23A-208ENST00000573857 KCNQ3O43525 872 aa19.1■□□□□ 0.65
TVP23A-208ENST00000573857 C9orf131Q5VYM1 1079 aa19.1■□□□□ 0.65
TVP23A-208ENST00000573857 AFDNP55196 1824 aaKnown RBP19.09■□□□□ 0.65
TVP23A-208ENST00000573857 IL6STP40189 918 aaPredicted RBP19.09■□□□□ 0.65
TVP23A-208ENST00000573857 A1BGP04217 495 aa19.08■□□□□ 0.64
TVP23A-208ENST00000573857 BICDL1Q6ZP65 573 aa19.08■□□□□ 0.64
TVP23A-208ENST00000573857 MCM10Q7L590 875 aa19.08■□□□□ 0.64
TVP23A-208ENST00000573857 RTF1Q92541 710 aaKnown RBP19.08■□□□□ 0.64
TVP23A-208ENST00000573857 ZNF330Q9Y3S2 320 aaPredicted RBP19.08■□□□□ 0.64
TVP23A-208ENST00000573857 CARMIL3Q8ND23 1372 aa19.07■□□□□ 0.64
TVP23A-208ENST00000573857 HSPA6P17066 643 aa19.07■□□□□ 0.64
TVP23A-208ENST00000573857 TBC1D9BQ66K14 1250 aa19.07■□□□□ 0.64
TVP23A-208ENST00000573857 TBC1D2BQ9UPU7 963 aa19.07■□□□□ 0.64
TVP23A-208ENST00000573857 SCN7AQ01118 1682 aa19.07■□□□□ 0.64
TVP23A-208ENST00000573857 HTATSF1O43719 755 aaKnown RBP19.05■□□□□ 0.64
TVP23A-208ENST00000573857 C2CD5Q86YS7 1000 aa19.05■□□□□ 0.64
TVP23A-208ENST00000573857 RNF181Q9P0P0 153 aa19.05■□□□□ 0.64
TVP23A-208ENST00000573857 CAMTA2O94983 1202 aa19.04■□□□□ 0.64
TVP23A-208ENST00000573857 DCTN1Q14203 1278 aa19.04■□□□□ 0.64
TVP23A-208ENST00000573857 NPM2Q86SE8 214 aaKnown RBP19.04■□□□□ 0.64
TVP23A-208ENST00000573857 TTLL6Q8N841 843 aa19.04■□□□□ 0.64
TVP23A-208ENST00000573857 NMRK2Q9NPI5 230 aa19.04■□□□□ 0.64
TVP23A-208ENST00000573857 USP16Q9Y5T5 823 aa19.04■□□□□ 0.64
TVP23A-208ENST00000573857 PRAMEF22A3QJZ6 481 aa19.03■□□□□ 0.64
TVP23A-208ENST00000573857 H0YIN7 160 aa19.03■□□□□ 0.64
TVP23A-208ENST00000573857 SNRPA1P09661 255 aaKnown RBP19.03■□□□□ 0.64
TVP23A-208ENST00000573857 DLEC1Q9Y238 1755 aa19.03■□□□□ 0.64
TVP23A-208ENST00000573857 TOMM70O94826 608 aa19.02■□□□□ 0.64
TVP23A-208ENST00000573857 RASSF7Q02833 373 aa19.02■□□□□ 0.64
TVP23A-208ENST00000573857 PRR5LQ6MZQ0 368 aa19.02■□□□□ 0.64
TVP23A-208ENST00000573857 DZIP3Q86Y13 1208 aaKnown RBP19.02■□□□□ 0.64
TVP23A-208ENST00000573857 PIP4K2AP48426 406 aaPredicted RBP19.01■□□□□ 0.63
TVP23A-208ENST00000573857 BRIP1Q9BX63 1249 aa19.01■□□□□ 0.63
TVP23A-208ENST00000573857 SETDB2Q96T68 719 aa19■□□□□ 0.63
TVP23A-208ENST00000573857 KDM2BQ8NHM5 1336 aa19■□□□□ 0.63
TVP23A-208ENST00000573857 PDE6BP35913 854 aa18.99■□□□□ 0.63
TVP23A-208ENST00000573857 TAF7Q15545 349 aaPredicted RBP18.99■□□□□ 0.63
TVP23A-208ENST00000573857 CCDC24Q8N4L8 307 aa18.99■□□□□ 0.63
TVP23A-208ENST00000573857 CNBD1Q8NA66 436 aa18.99■□□□□ 0.63
TVP23A-208ENST00000573857 PDZRN3Q9UPQ7 1066 aa18.99■□□□□ 0.63
TVP23A-208ENST00000573857 BCORQ6W2J9 1755 aa18.98■□□□□ 0.63
TVP23A-208ENST00000573857 NEFMP07197 916 aa18.98■□□□□ 0.63
TVP23A-208ENST00000573857 LMNB1P20700 586 aa18.98■□□□□ 0.63
TVP23A-208ENST00000573857 ZNF622Q969S3 477 aaKnown RBP eCLIP18.98■□□□□ 0.63
TVP23A-208ENST00000573857 PLEKHF1Q96S99 279 aa18.98■□□□□ 0.63
TVP23A-208ENST00000573857 SBF1O95248 1867 aa18.98■□□□□ 0.63
TVP23A-208ENST00000573857 ANKRD31Q8N7Z5 1873 aa18.98■□□□□ 0.63
TVP23A-208ENST00000573857 ZC3H4Q9UPT8 1303 aaKnown RBP18.98■□□□□ 0.63
TVP23A-208ENST00000573857 NBPF26B4DH59 902 aa18.97■□□□□ 0.63
TVP23A-208ENST00000573857 PRELPP51888 382 aa18.97■□□□□ 0.63
TVP23A-208ENST00000573857 NBPF10Q6P3W6 841 aaKnown RBP18.97■□□□□ 0.63
TVP23A-208ENST00000573857 CLEC4GQ6UXB4 293 aa18.97■□□□□ 0.63
TVP23A-208ENST00000573857 NBPF15Q8N660 670 aa18.97■□□□□ 0.63
TVP23A-208ENST00000573857 NFKBIEO00221 500 aa18.96■□□□□ 0.63
TVP23A-208ENST00000573857 NPHP1O15259 732 aa18.96■□□□□ 0.63
TVP23A-208ENST00000573857 ST5P78524 1137 aa18.96■□□□□ 0.63
TVP23A-208ENST00000573857 RBM46Q8TBY0 533 aaKnown RBP18.96■□□□□ 0.63
TVP23A-208ENST00000573857 MIS18AQ9NYP9 233 aa18.96■□□□□ 0.63
TVP23A-208ENST00000573857 ZNF652Q9Y2D9 606 aa18.96■□□□□ 0.63
TVP23A-208ENST00000573857 COL11A2P13942 1736 aaPredicted RBP18.95■□□□□ 0.62
TVP23A-208ENST00000573857 APLP1P51693 650 aa18.95■□□□□ 0.62
TVP23A-208ENST00000573857 NFE2L2Q16236 605 aa18.95■□□□□ 0.62
TVP23A-208ENST00000573857 C16orf71Q8IYS4 520 aaPredicted RBP18.95■□□□□ 0.62
TVP23A-208ENST00000573857 RGL2O15211 777 aa18.94■□□□□ 0.62
TVP23A-208ENST00000573857 ZEB1P37275 1124 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms