RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 HDAC5Q9UQL6 1122 aa16.16■□□□□ 0.18
PRPF8-207ENST00000573681 USP16Q9Y5T5 823 aa16.16■□□□□ 0.18
PRPF8-207ENST00000573681 ALDH1L1O75891 902 aa16.15■□□□□ 0.18
PRPF8-207ENST00000573681 GNAI2P04899 355 aa16.15■□□□□ 0.18
PRPF8-207ENST00000573681 PIGBQ92521 554 aa16.15■□□□□ 0.18
PRPF8-207ENST00000573681 PXDNLA1KZ92 1463 aa16.15■□□□□ 0.18
PRPF8-207ENST00000573681 HMMRO75330 724 aa16.14■□□□□ 0.17
PRPF8-207ENST00000573681 ANXA1P04083 346 aa16.14■□□□□ 0.17
PRPF8-207ENST00000573681 PROSER3Q2NL68 480 aa16.14■□□□□ 0.17
PRPF8-207ENST00000573681 BEND3Q5T5X7 828 aa16.14■□□□□ 0.17
PRPF8-207ENST00000573681 MEIS3Q99687 375 aa16.14■□□□□ 0.17
PRPF8-207ENST00000573681 USP21Q9UK80 565 aa16.14■□□□□ 0.17
PRPF8-207ENST00000573681 TNS2Q63HR2 1409 aa16.13■□□□□ 0.17
PRPF8-207ENST00000573681 SIRT2Q8IXJ6 389 aa16.13■□□□□ 0.17
PRPF8-207ENST00000573681 C1orf115Q9H7X2 142 aa16.13■□□□□ 0.17
PRPF8-207ENST00000573681 ATG3Q9NT62 314 aa16.13■□□□□ 0.17
PRPF8-207ENST00000573681 MAP3K2Q9Y2U5 619 aa16.13■□□□□ 0.17
PRPF8-207ENST00000573681 NWD2Q9ULI1 1742 aa16.13■□□□□ 0.17
PRPF8-207ENST00000573681 CACNA1FO60840 1977 aa16.13■□□□□ 0.17
PRPF8-207ENST00000573681 ATP10DQ9P241 1426 aa16.12■□□□□ 0.17
PRPF8-207ENST00000573681 PLCH1Q4KWH8 1693 aa16.12■□□□□ 0.17
PRPF8-207ENST00000573681 BCL9LQ86UU0 1499 aa16.12■□□□□ 0.17
PRPF8-207ENST00000573681 NUCB1Q02818 461 aa16.12■□□□□ 0.17
PRPF8-207ENST00000573681 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
PRPF8-207ENST00000573681 USP44Q9H0E7 712 aa16.12■□□□□ 0.17
PRPF8-207ENST00000573681 DCTPP1Q9H773 170 aa16.12■□□□□ 0.17
PRPF8-207ENST00000573681 PTCD1O75127 700 aaKnown RBP16.11■□□□□ 0.17
PRPF8-207ENST00000573681 RGS3P49796 1198 aa16.11■□□□□ 0.17
PRPF8-207ENST00000573681 CEP85Q6P2H3 762 aa16.11■□□□□ 0.17
PRPF8-207ENST00000573681 ANKRD13DQ6ZTN6 518 aa16.11■□□□□ 0.17
PRPF8-207ENST00000573681 COPS6Q7L5N1 327 aa16.11■□□□□ 0.17
PRPF8-207ENST00000573681 RIC3Q7Z5B4 369 aa16.11■□□□□ 0.17
PRPF8-207ENST00000573681 LINS1Q8NG48 757 aa16.11■□□□□ 0.17
PRPF8-207ENST00000573681 XAGE3Q8WTP9 111 aa16.11■□□□□ 0.17
PRPF8-207ENST00000573681 IBTKQ9P2D0 1353 aaPredicted RBP16.11■□□□□ 0.17
PRPF8-207ENST00000573681 NRAPQ86VF7 1730 aa16.11■□□□□ 0.17
PRPF8-207ENST00000573681 STARD3NLO95772 234 aa16.1■□□□□ 0.17
PRPF8-207ENST00000573681 UBTFL1P0CB47 393 aaPredicted RBP16.1■□□□□ 0.17
PRPF8-207ENST00000573681 MYL6BP14649 208 aa16.1■□□□□ 0.17
PRPF8-207ENST00000573681 PRIM1P49642 420 aaKnown RBP16.1■□□□□ 0.17
PRPF8-207ENST00000573681 ATP8B2P98198 1209 aa16.1■□□□□ 0.17
PRPF8-207ENST00000573681 NEXNQ0ZGT2 675 aa16.1■□□□□ 0.17
PRPF8-207ENST00000573681 AIMP1Q12904 312 aaKnown RBP16.1■□□□□ 0.17
PRPF8-207ENST00000573681 MARCH10Q8NA82 808 aaPredicted RBP16.1■□□□□ 0.17
PRPF8-207ENST00000573681 ASAP1Q9ULH1 1129 aa16.1■□□□□ 0.17
PRPF8-207ENST00000573681 ADCY9O60503 1353 aa16.1■□□□□ 0.17
PRPF8-207ENST00000573681 BCL9O00512 1426 aa16.1■□□□□ 0.17
PRPF8-207ENST00000573681 PDE4AP27815 886 aa16.09■□□□□ 0.17
PRPF8-207ENST00000573681 LRP10Q7Z4F1 713 aa16.09■□□□□ 0.17
PRPF8-207ENST00000573681 RBM19Q9Y4C8 960 aaKnown RBP16.09■□□□□ 0.17
PRPF8-207ENST00000573681 VIRMAQ69YN4 1812 aaKnown RBP16.09■□□□□ 0.17
PRPF8-207ENST00000573681 LRP6O75581 1613 aa16.08■□□□□ 0.17
PRPF8-207ENST00000573681 FAM98CQ17RN3 349 aaKnown RBP16.08■□□□□ 0.16
PRPF8-207ENST00000573681 CHD1LQ86WJ1 897 aa16.08■□□□□ 0.16
PRPF8-207ENST00000573681 SKAP1Q86WV1 359 aa16.08■□□□□ 0.16
PRPF8-207ENST00000573681 PLBD2Q8NHP8 589 aa16.08■□□□□ 0.16
PRPF8-207ENST00000573681 METTL22Q9BUU2 404 aaPredicted RBP16.08■□□□□ 0.16
PRPF8-207ENST00000573681 ZBTB47Q9UFB7 747 aaPredicted RBP16.08■□□□□ 0.16
PRPF8-207ENST00000573681 SHANK3Q9BYB0 1731 aa16.08■□□□□ 0.16
PRPF8-207ENST00000573681 ANKRD45Q5TZF3 282 aa16.07■□□□□ 0.16
PRPF8-207ENST00000573681 SYTL4Q96C24 671 aaPredicted RBP16.07■□□□□ 0.16
PRPF8-207ENST00000573681 RBM42Q9BTD8 480 aaKnown RBP16.07■□□□□ 0.16
PRPF8-207ENST00000573681 BACH2Q9BYV9 841 aa16.07■□□□□ 0.16
PRPF8-207ENST00000573681 C9orf78Q9NZ63 289 aaPredicted RBP16.07■□□□□ 0.16
PRPF8-207ENST00000573681 KCPQ6ZWJ8 1503 aa16.06■□□□□ 0.16
PRPF8-207ENST00000573681 NBPF26B4DH59 902 aa16.06■□□□□ 0.16
PRPF8-207ENST00000573681 A1BGP04217 495 aa16.06■□□□□ 0.16
PRPF8-207ENST00000573681 FAM161AQ3B820 660 aa16.06■□□□□ 0.16
PRPF8-207ENST00000573681 NBPF14Q5TI25 921 aa16.06■□□□□ 0.16
PRPF8-207ENST00000573681 NBPF10Q6P3W6 841 aaKnown RBP16.06■□□□□ 0.16
PRPF8-207ENST00000573681 NBPF15Q8N660 670 aa16.06■□□□□ 0.16
PRPF8-207ENST00000573681 SMARCC1Q92922 1105 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-207ENST00000573681 GJD4Q96KN9 370 aaPredicted RBP16.05■□□□□ 0.16
PRPF8-207ENST00000573681 LRRFIP2Q9Y608 721 aaKnown RBP16.05■□□□□ 0.16
PRPF8-207ENST00000573681 UTYO14607 1347 aa16.04■□□□□ 0.16
PRPF8-207ENST00000573681 ONECUT3O60422 494 aaPredicted RBP16.04■□□□□ 0.16
PRPF8-207ENST00000573681 DNAJC10Q8IXB1 793 aa16.04■□□□□ 0.16
PRPF8-207ENST00000573681 TRPC5Q9UL62 973 aaPredicted RBP16.04■□□□□ 0.16
PRPF8-207ENST00000573681 AFF2P51816 1311 aa16.03■□□□□ 0.16
PRPF8-207ENST00000573681 GRM8O00222 908 aa16.03■□□□□ 0.16
PRPF8-207ENST00000573681 NBPF7P0C2Y1 421 aaPredicted RBP16.03■□□□□ 0.16
PRPF8-207ENST00000573681 MYD88Q99836 296 aa16.03■□□□□ 0.16
PRPF8-207ENST00000573681 NEURL1BA8MQ27 555 aa16.02■□□□□ 0.16
PRPF8-207ENST00000573681 IGKV5-2P06315 115 aa16.02■□□□□ 0.16
PRPF8-207ENST00000573681 GCKRQ14397 625 aa16.02■□□□□ 0.16
PRPF8-207ENST00000573681 SSH3Q8TE77 659 aa16.02■□□□□ 0.16
PRPF8-207ENST00000573681 LNPKQ9C0E8 428 aa16.02■□□□□ 0.16
PRPF8-207ENST00000573681 PAPPAQ13219 1627 aa16.01■□□□□ 0.15
PRPF8-207ENST00000573681 CYP19A1P11511 503 aaPredicted RBP16.01■□□□□ 0.15
PRPF8-207ENST00000573681 PIP4K2AP48426 406 aaPredicted RBP16.01■□□□□ 0.15
PRPF8-207ENST00000573681 MTX1Q13505 466 aa16.01■□□□□ 0.15
PRPF8-207ENST00000573681 CWF19L2Q2TBE0 894 aaKnown RBP16.01■□□□□ 0.15
PRPF8-207ENST00000573681 ACSBG1Q96GR2 724 aa16.01■□□□□ 0.15
PRPF8-207ENST00000573681 UBR2Q8IWV8 1755 aa16■□□□□ 0.15
PRPF8-207ENST00000573681 A0A0G2JS52 829 aa16■□□□□ 0.15
PRPF8-207ENST00000573681 RAB11FIP3O75154 756 aa16■□□□□ 0.15
PRPF8-207ENST00000573681 MYT1Q01538 1121 aa16■□□□□ 0.15
PRPF8-207ENST00000573681 POLA2Q14181 598 aa16■□□□□ 0.15
PRPF8-207ENST00000573681 HSP90AB4PQ58FF6 505 aa16■□□□□ 0.15
PRPF8-207ENST00000573681 WNK3Q9BYP7 1800 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms