RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 DCTN1Q14203 1278 aa16.87■□□□□ 0.29
NPLOC4-213ENST00000573519 RALBP1Q15311 655 aa16.87■□□□□ 0.29
NPLOC4-213ENST00000573519 ZNF330Q9Y3S2 320 aaPredicted RBP16.87■□□□□ 0.29
NPLOC4-213ENST00000573519 HEG1Q9ULI3 1381 aa16.87■□□□□ 0.29
NPLOC4-213ENST00000573519 KCNQ3O43525 872 aa16.86■□□□□ 0.29
NPLOC4-213ENST00000573519 ZNF784Q8NCA9 323 aaPredicted RBP16.86■□□□□ 0.29
NPLOC4-213ENST00000573519 TEX13AQ9BXU3 409 aaPredicted RBP16.86■□□□□ 0.29
NPLOC4-213ENST00000573519 CHD4Q14839 1912 aa16.85■□□□□ 0.29
NPLOC4-213ENST00000573519 C10orf71Q711Q0 1435 aa16.85■□□□□ 0.29
NPLOC4-213ENST00000573519 A0A0G2JLW4 131 aa16.84■□□□□ 0.29
NPLOC4-213ENST00000573519 NARFQ9UHQ1 456 aa16.84■□□□□ 0.29
NPLOC4-213ENST00000573519 MAPK8IP3Q9UPT6 1336 aa16.84■□□□□ 0.29
NPLOC4-213ENST00000573519 PXDNLA1KZ92 1463 aa16.84■□□□□ 0.29
NPLOC4-213ENST00000573519 HTATSF1O43719 755 aaKnown RBP16.83■□□□□ 0.28
NPLOC4-213ENST00000573519 TGFB2P61812 414 aa16.83■□□□□ 0.28
NPLOC4-213ENST00000573519 DDR1Q08345 913 aa16.83■□□□□ 0.28
NPLOC4-213ENST00000573519 PNNQ9H307 717 aaKnown RBP16.83■□□□□ 0.28
NPLOC4-213ENST00000573519 GOLGB1Q14789 3259 aaKnown RBP16.82■□□□□ 0.28
NPLOC4-213ENST00000573519 NPM2Q86SE8 214 aaKnown RBP16.82■□□□□ 0.28
NPLOC4-213ENST00000573519 PLEKHF1Q96S99 279 aa16.82■□□□□ 0.28
NPLOC4-213ENST00000573519 MYBBP1AQ9BQG0 1328 aaKnown RBP16.81■□□□□ 0.28
NPLOC4-213ENST00000573519 A0A087WZG4 1122 aa16.81■□□□□ 0.28
NPLOC4-213ENST00000573519 POLRMTO00411 1230 aaKnown RBP16.81■□□□□ 0.28
NPLOC4-213ENST00000573519 A1BGP04217 495 aa16.81■□□□□ 0.28
NPLOC4-213ENST00000573519 DPEP1P16444 411 aa16.81■□□□□ 0.28
NPLOC4-213ENST00000573519 TM4SF1P30408 202 aa16.81■□□□□ 0.28
NPLOC4-213ENST00000573519 BCS1LQ9Y276 419 aa16.81■□□□□ 0.28
NPLOC4-213ENST00000573519 KIF13BQ9NQT8 1826 aa16.81■□□□□ 0.28
NPLOC4-213ENST00000573519 N4BP2Q86UW6 1770 aaPredicted RBP16.81■□□□□ 0.28
NPLOC4-213ENST00000573519 EIF5P55010 431 aaKnown RBP16.8■□□□□ 0.28
NPLOC4-213ENST00000573519 TAF7Q15545 349 aaPredicted RBP16.8■□□□□ 0.28
NPLOC4-213ENST00000573519 NFE2L2Q16236 605 aa16.8■□□□□ 0.28
NPLOC4-213ENST00000573519 BICDL1Q6ZP65 573 aa16.8■□□□□ 0.28
NPLOC4-213ENST00000573519 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
NPLOC4-213ENST00000573519 KIAA1551Q9HCM1 1747 aa16.79■□□□□ 0.28
NPLOC4-213ENST00000573519 PRAMEF22A3QJZ6 481 aa16.79■□□□□ 0.28
NPLOC4-213ENST00000573519 IL6STP40189 918 aaPredicted RBP16.79■□□□□ 0.28
NPLOC4-213ENST00000573519 NFIXQ14938 502 aa16.79■□□□□ 0.28
NPLOC4-213ENST00000573519 BCL2L12Q9HB09 334 aa16.79■□□□□ 0.28
NPLOC4-213ENST00000573519 TBC1D2BQ9UPU7 963 aa16.79■□□□□ 0.28
NPLOC4-213ENST00000573519 USP16Q9Y5T5 823 aa16.79■□□□□ 0.28
NPLOC4-213ENST00000573519 SNRPA1P09661 255 aaKnown RBP16.78■□□□□ 0.28
NPLOC4-213ENST00000573519 PIP4K2AP48426 406 aaPredicted RBP16.78■□□□□ 0.28
NPLOC4-213ENST00000573519 THUMPD2Q9BTF0 503 aaKnown RBP16.78■□□□□ 0.28
NPLOC4-213ENST00000573519 DLG5Q8TDM6 1919 aa16.76■□□□□ 0.27
NPLOC4-213ENST00000573519 SERPINB2P05120 415 aa16.76■□□□□ 0.27
NPLOC4-213ENST00000573519 CHRNA5P30532 468 aa16.76■□□□□ 0.27
NPLOC4-213ENST00000573519 PNISRQ8TF01 805 aaKnown RBP16.76■□□□□ 0.27
NPLOC4-213ENST00000573519 PIM2Q9P1W9 311 aa16.76■□□□□ 0.27
NPLOC4-213ENST00000573519 WDR43Q15061 677 aaKnown RBP eCLIP16.75■□□□□ 0.27
NPLOC4-213ENST00000573519 TBC1D9BQ66K14 1250 aa16.75■□□□□ 0.27
NPLOC4-213ENST00000573519 ARHGAP27Q6ZUM4 889 aa16.75■□□□□ 0.27
NPLOC4-213ENST00000573519 DZIP3Q86Y13 1208 aaKnown RBP16.75■□□□□ 0.27
NPLOC4-213ENST00000573519 CCDC146Q8IYE0 955 aa16.75■□□□□ 0.27
NPLOC4-213ENST00000573519 KCNA3P22001 575 aa16.74■□□□□ 0.27
NPLOC4-213ENST00000573519 RIPK4P57078 832 aa16.74■□□□□ 0.27
NPLOC4-213ENST00000573519 SCN7AQ01118 1682 aa16.74■□□□□ 0.27
NPLOC4-213ENST00000573519 ATP10DQ9P241 1426 aa16.73■□□□□ 0.27
NPLOC4-213ENST00000573519 DALRD3Q5D0E6 543 aaKnown RBP16.73■□□□□ 0.27
NPLOC4-213ENST00000573519 ZNF526Q8TF50 670 aaPredicted RBP16.73■□□□□ 0.27
NPLOC4-213ENST00000573519 NPHP1O15259 732 aa16.72■□□□□ 0.27
NPLOC4-213ENST00000573519 GIGYF1O75420 1035 aaPredicted RBP16.72■□□□□ 0.27
NPLOC4-213ENST00000573519 CAMTA2O94983 1202 aa16.72■□□□□ 0.27
NPLOC4-213ENST00000573519 NEUROD2Q15784 382 aa16.72■□□□□ 0.27
NPLOC4-213ENST00000573519 PRKRIP1Q9H875 184 aaPredicted RBP16.72■□□□□ 0.27
NPLOC4-213ENST00000573519 RRP7AQ9Y3A4 280 aaKnown RBP16.72■□□□□ 0.27
NPLOC4-213ENST00000573519 AFDNP55196 1824 aaKnown RBP16.72■□□□□ 0.27
NPLOC4-213ENST00000573519 ZNF316A6NFI3 1004 aaPredicted RBP16.71■□□□□ 0.27
NPLOC4-213ENST00000573519 TMPOP42166 694 aaKnown RBP16.71■□□□□ 0.27
NPLOC4-213ENST00000573519 SETDB2Q96T68 719 aa16.71■□□□□ 0.27
NPLOC4-213ENST00000573519 CARMIL3Q8ND23 1372 aa16.71■□□□□ 0.27
NPLOC4-213ENST00000573519 KDM3BQ7LBC6 1761 aa16.71■□□□□ 0.27
NPLOC4-213ENST00000573519 NRXN2Q9P2S2 1712 aa16.7■□□□□ 0.26
NPLOC4-213ENST00000573519 NBPF26B4DH59 902 aa16.7■□□□□ 0.26
NPLOC4-213ENST00000573519 EIF4A1P60842 406 aaKnown RBP16.7■□□□□ 0.26
NPLOC4-213ENST00000573519 LMOD3Q0VAK6 560 aa16.7■□□□□ 0.26
NPLOC4-213ENST00000573519 NBPF10Q6P3W6 841 aaKnown RBP16.7■□□□□ 0.26
NPLOC4-213ENST00000573519 C2CD5Q86YS7 1000 aa16.7■□□□□ 0.26
NPLOC4-213ENST00000573519 CCDC24Q8N4L8 307 aa16.7■□□□□ 0.26
NPLOC4-213ENST00000573519 NBPF15Q8N660 670 aa16.7■□□□□ 0.26
NPLOC4-213ENST00000573519 TSPYL4Q9UJ04 414 aa16.7■□□□□ 0.26
NPLOC4-213ENST00000573519 BRCA1P38398 1863 aaKnown RBP16.69■□□□□ 0.26
NPLOC4-213ENST00000573519 NGEFQ8N5V2 710 aa16.69■□□□□ 0.26
NPLOC4-213ENST00000573519 RUNDC1Q96C34 613 aa16.69■□□□□ 0.26
NPLOC4-213ENST00000573519 GPBP1L1Q9HC44 474 aaPredicted RBP16.69■□□□□ 0.26
NPLOC4-213ENST00000573519 ZNF652Q9Y2D9 606 aa16.69■□□□□ 0.26
NPLOC4-213ENST00000573519 LAMB4A4D0S4 1761 aa16.69■□□□□ 0.26
NPLOC4-213ENST00000573519 BCORQ6W2J9 1755 aa16.69■□□□□ 0.26
NPLOC4-213ENST00000573519 ADCY9O60503 1353 aa16.68■□□□□ 0.26
NPLOC4-213ENST00000573519 H0YIN7 160 aa16.68■□□□□ 0.26
NPLOC4-213ENST00000573519 PRR5LQ6MZQ0 368 aa16.68■□□□□ 0.26
NPLOC4-213ENST00000573519 ADAMTS8Q9UP79 889 aa16.68■□□□□ 0.26
NPLOC4-213ENST00000573519 CNBD1Q8NA66 436 aa16.67■□□□□ 0.26
NPLOC4-213ENST00000573519 MYL6BP14649 208 aa16.66■□□□□ 0.26
NPLOC4-213ENST00000573519 PDE6BP35913 854 aa16.66■□□□□ 0.26
NPLOC4-213ENST00000573519 C1QTNF8P60827 252 aa16.66■□□□□ 0.26
NPLOC4-213ENST00000573519 ST5P78524 1137 aa16.66■□□□□ 0.26
NPLOC4-213ENST00000573519 CLEC4GQ6UXB4 293 aa16.66■□□□□ 0.26
NPLOC4-213ENST00000573519 LAS1LQ9Y4W2 734 aaKnown RBP16.66■□□□□ 0.26
NPLOC4-213ENST00000573519 ARFGEF1Q9Y6D6 1849 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms