RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 CCDC85AQ96PX6 553 aaPredicted RBP17.33■□□□□ 0.36
TVP23A-207ENST00000573360 MYD88Q99836 296 aa17.33■□□□□ 0.36
TVP23A-207ENST00000573360 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.36
TVP23A-207ENST00000573360 UPF2Q9HAU5 1272 aaKnown RBP17.33■□□□□ 0.36
TVP23A-207ENST00000573360 MARF1Q9Y4F3 1742 aaKnown RBP17.32■□□□□ 0.36
TVP23A-207ENST00000573360 GSE1Q14687 1217 aa17.32■□□□□ 0.36
TVP23A-207ENST00000573360 COL5A2P05997 1499 aaPredicted RBP17.32■□□□□ 0.36
TVP23A-207ENST00000573360 GNAI2P04899 355 aa17.32■□□□□ 0.36
TVP23A-207ENST00000573360 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
TVP23A-207ENST00000573360 TRPM3Q9HCF6 1732 aaPredicted RBP17.32■□□□□ 0.36
TVP23A-207ENST00000573360 IL1RAPL2Q9NP60 686 aa17.32■□□□□ 0.36
TVP23A-207ENST00000573360 CERKQ8TCT0 537 aa17.31■□□□□ 0.36
TVP23A-207ENST00000573360 KDM6AO15550 1401 aaPredicted RBP17.31■□□□□ 0.36
TVP23A-207ENST00000573360 INTS3Q68E01 1043 aaKnown RBP17.31■□□□□ 0.36
TVP23A-207ENST00000573360 PIGBQ92521 554 aa17.31■□□□□ 0.36
TVP23A-207ENST00000573360 DNAJC10Q8IXB1 793 aa17.3■□□□□ 0.36
TVP23A-207ENST00000573360 SIL1Q9H173 461 aa17.3■□□□□ 0.36
TVP23A-207ENST00000573360 BRPF3Q9ULD4 1205 aa17.3■□□□□ 0.36
TVP23A-207ENST00000573360 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.3■□□□□ 0.36
TVP23A-207ENST00000573360 DDX58O95786 925 aaKnown RBP17.29■□□□□ 0.36
TVP23A-207ENST00000573360 OTUD7AQ8TE49 926 aaPredicted RBP17.29■□□□□ 0.36
TVP23A-207ENST00000573360 NEXNQ0ZGT2 675 aa17.29■□□□□ 0.36
TVP23A-207ENST00000573360 PNMA6EA0A0J9YXQ4 647 aa17.29■□□□□ 0.36
TVP23A-207ENST00000573360 SRGAP3O43295 1099 aa17.29■□□□□ 0.36
TVP23A-207ENST00000573360 MFAP1P55081 439 aaKnown RBP17.29■□□□□ 0.36
TVP23A-207ENST00000573360 CHD1LQ86WJ1 897 aa17.29■□□□□ 0.36
TVP23A-207ENST00000573360 USP21Q9UK80 565 aa17.29■□□□□ 0.36
TVP23A-207ENST00000573360 SURF6O75683 361 aaKnown RBP17.28■□□□□ 0.36
TVP23A-207ENST00000573360 CEP85Q6P2H3 762 aa17.28■□□□□ 0.36
TVP23A-207ENST00000573360 KCNQ2O43526 872 aa17.28■□□□□ 0.36
TVP23A-207ENST00000573360 RGPD1P0DJD0 1748 aa17.28■□□□□ 0.36
TVP23A-207ENST00000573360 TTLL7Q6ZT98 887 aa17.28■□□□□ 0.36
TVP23A-207ENST00000573360 USP44Q9H0E7 712 aa17.28■□□□□ 0.36
TVP23A-207ENST00000573360 BECN1Q14457 450 aa17.27■□□□□ 0.36
TVP23A-207ENST00000573360 GNAI3P08754 354 aa17.27■□□□□ 0.36
TVP23A-207ENST00000573360 BRPF1P55201 1214 aaPredicted RBP17.27■□□□□ 0.36
TVP23A-207ENST00000573360 SMIM5Q71RC9 77 aa17.27■□□□□ 0.36
TVP23A-207ENST00000573360 DDX21Q9NR30 783 aaKnown RBP eCLIP17.27■□□□□ 0.36
TVP23A-207ENST00000573360 ROBO1Q9Y6N7 1651 aa17.27■□□□□ 0.35
TVP23A-207ENST00000573360 HMMRO75330 724 aa17.27■□□□□ 0.35
TVP23A-207ENST00000573360 SEC24BO95487 1268 aa17.27■□□□□ 0.35
TVP23A-207ENST00000573360 GPTP24298 496 aa17.27■□□□□ 0.35
TVP23A-207ENST00000573360 ANKRD13DQ6ZTN6 518 aa17.27■□□□□ 0.35
TVP23A-207ENST00000573360 ALS2Q96Q42 1657 aa17.27■□□□□ 0.35
TVP23A-207ENST00000573360 HYPKQ9NX55 129 aa17.26■□□□□ 0.35
TVP23A-207ENST00000573360 HDAC1Q13547 482 aaPredicted RBP17.25■□□□□ 0.35
TVP23A-207ENST00000573360 PPP1R42Q7Z4L9 355 aa17.25■□□□□ 0.35
TVP23A-207ENST00000573360 KLHDC4Q8TBB5 520 aa17.25■□□□□ 0.35
TVP23A-207ENST00000573360 PA2G4Q9UQ80 394 aaKnown RBP17.25■□□□□ 0.35
TVP23A-207ENST00000573360 KSR2Q6VAB6 950 aa17.25■□□□□ 0.35
TVP23A-207ENST00000573360 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
TVP23A-207ENST00000573360 UBE3BQ7Z3V4 1068 aa17.25■□□□□ 0.35
TVP23A-207ENST00000573360 TBC1D2BQ9UPU7 963 aa17.25■□□□□ 0.35
TVP23A-207ENST00000573360 MAP4K4O95819 1239 aaPredicted RBP17.23■□□□□ 0.35
TVP23A-207ENST00000573360 AAMPQ13685 434 aa17.23■□□□□ 0.35
TVP23A-207ENST00000573360 ANKRD44Q8N8A2 993 aa17.23■□□□□ 0.35
TVP23A-207ENST00000573360 CHMP4AQ9BY43 222 aa17.23■□□□□ 0.35
TVP23A-207ENST00000573360 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.23■□□□□ 0.35
TVP23A-207ENST00000573360 ERVV-2B6SEH9 535 aa17.22■□□□□ 0.35
TVP23A-207ENST00000573360 NUTM1Q86Y26 1132 aa17.22■□□□□ 0.35
TVP23A-207ENST00000573360 SMC5Q8IY18 1101 aa17.22■□□□□ 0.35
TVP23A-207ENST00000573360 OVOS2A0A0G2JMS6 1433 aa17.22■□□□□ 0.35
TVP23A-207ENST00000573360 BEND3Q5T5X7 828 aa17.22■□□□□ 0.35
TVP23A-207ENST00000573360 RPAP2Q8IXW5 612 aaPredicted RBP17.22■□□□□ 0.35
TVP23A-207ENST00000573360 A0A087WZG4 1122 aa17.22■□□□□ 0.35
TVP23A-207ENST00000573360 NBPF26B4DH59 902 aa17.22■□□□□ 0.35
TVP23A-207ENST00000573360 NBPF14Q5TI25 921 aa17.22■□□□□ 0.35
TVP23A-207ENST00000573360 NBPF10Q6P3W6 841 aaKnown RBP17.22■□□□□ 0.35
TVP23A-207ENST00000573360 PTF1AQ7RTS3 328 aa17.22■□□□□ 0.35
TVP23A-207ENST00000573360 NBPF15Q8N660 670 aa17.22■□□□□ 0.35
TVP23A-207ENST00000573360 MARCH10Q8NA82 808 aaPredicted RBP17.22■□□□□ 0.35
TVP23A-207ENST00000573360 UNC5CLQ8IV45 518 aa17.21■□□□□ 0.35
TVP23A-207ENST00000573360 ATG3Q9NT62 314 aa17.21■□□□□ 0.35
TVP23A-207ENST00000573360 TRIM6-TRIM34B2RNG4 842 aa17.2■□□□□ 0.34
TVP23A-207ENST00000573360 ATP6V1AP38606 617 aa17.2■□□□□ 0.34
TVP23A-207ENST00000573360 NUCB1Q02818 461 aa17.2■□□□□ 0.34
TVP23A-207ENST00000573360 PDIA6Q15084 440 aa17.2■□□□□ 0.34
TVP23A-207ENST00000573360 GCC1Q96CN9 775 aa17.2■□□□□ 0.34
TVP23A-207ENST00000573360 SPATA31A1Q5TZJ5 1347 aa17.2■□□□□ 0.34
TVP23A-207ENST00000573360 HOXB7P09629 217 aa17.2■□□□□ 0.34
TVP23A-207ENST00000573360 RILPL2Q969X0 211 aa17.2■□□□□ 0.34
TVP23A-207ENST00000573360 RGS12O14924 1447 aa17.19■□□□□ 0.34
TVP23A-207ENST00000573360 PHRF1Q9P1Y6 1649 aaKnown RBP17.19■□□□□ 0.34
TVP23A-207ENST00000573360 STARD3NLO95772 234 aa17.19■□□□□ 0.34
TVP23A-207ENST00000573360 ADCY9O60503 1353 aa17.19■□□□□ 0.34
TVP23A-207ENST00000573360 LTBP4Q8N2S1 1624 aa17.18■□□□□ 0.34
TVP23A-207ENST00000573360 BICDL1Q6ZP65 573 aa17.18■□□□□ 0.34
TVP23A-207ENST00000573360 ANO8Q9HCE9 1232 aaPredicted RBP17.18■□□□□ 0.34
TVP23A-207ENST00000573360 GRM8O00222 908 aa17.18■□□□□ 0.34
TVP23A-207ENST00000573360 SUCLG2Q96I99 432 aa17.17■□□□□ 0.34
TVP23A-207ENST00000573360 ZBTB1Q9Y2K1 713 aa17.17■□□□□ 0.34
TVP23A-207ENST00000573360 EP400Q96L91 3159 aa17.17■□□□□ 0.34
TVP23A-207ENST00000573360 EIF5BO60841 1220 aaKnown RBP17.17■□□□□ 0.34
TVP23A-207ENST00000573360 IGKV5-2P06315 115 aa17.17■□□□□ 0.34
TVP23A-207ENST00000573360 BICC1Q9H694 974 aaKnown RBP17.17■□□□□ 0.34
TVP23A-207ENST00000573360 NCAPD2Q15021 1401 aa17.17■□□□□ 0.34
TVP23A-207ENST00000573360 LINS1Q8NG48 757 aa17.17■□□□□ 0.34
TVP23A-207ENST00000573360 DCTPP1Q9H773 170 aa17.17■□□□□ 0.34
TVP23A-207ENST00000573360 HEG1Q9ULI3 1381 aa17.16■□□□□ 0.34
TVP23A-207ENST00000573360 AFF2P51816 1311 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms