RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 MAP9Q49MG5 647 aa12.55□□□□□ -0.4
CHRNB1-205ENST00000573209 TMEM132EQ6IEE7 984 aa12.55□□□□□ -0.4
CHRNB1-205ENST00000573209 GGT6Q6P531 493 aa12.55□□□□□ -0.4
CHRNB1-205ENST00000573209 DZIP1LQ8IYY4 767 aaKnown RBP12.55□□□□□ -0.4
CHRNB1-205ENST00000573209 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.55□□□□□ -0.4
CHRNB1-205ENST00000573209 DDX49Q9Y6V7 483 aaKnown RBP12.55□□□□□ -0.4
CHRNB1-205ENST00000573209 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
CHRNB1-205ENST00000573209 MAP2K2P36507 400 aa12.55□□□□□ -0.4
CHRNB1-205ENST00000573209 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
CHRNB1-205ENST00000573209 SYT10Q6XYQ8 523 aa12.55□□□□□ -0.4
CHRNB1-205ENST00000573209 ANKRD20A12PQ8NF67 263 aa12.55□□□□□ -0.4
CHRNB1-205ENST00000573209 ZNF446Q9NWS9 450 aa12.55□□□□□ -0.4
CHRNB1-205ENST00000573209 A0A1W2PP64 1363 aa12.54□□□□□ -0.4
CHRNB1-205ENST00000573209 ATAD2Q6PL18 1390 aa12.54□□□□□ -0.4
CHRNB1-205ENST00000573209 PTPRMP28827 1452 aa12.54□□□□□ -0.4
CHRNB1-205ENST00000573209 HDAC1Q13547 482 aaPredicted RBP12.54□□□□□ -0.4
CHRNB1-205ENST00000573209 MCTP2Q6DN12 878 aa12.54□□□□□ -0.4
CHRNB1-205ENST00000573209 NUCKS1Q9H1E3 243 aaKnown RBP12.54□□□□□ -0.4
CHRNB1-205ENST00000573209 ATG3Q9NT62 314 aa12.54□□□□□ -0.4
CHRNB1-205ENST00000573209 SETDB1Q15047 1291 aa12.54□□□□□ -0.4
CHRNB1-205ENST00000573209 TMTC2Q8N394 836 aa12.54□□□□□ -0.4
CHRNB1-205ENST00000573209 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHRNB1-205ENST00000573209 DDX19BQ9UMR2 479 aa12.54□□□□□ -0.4
CHRNB1-205ENST00000573209 TNNQ9UQP3 1299 aa12.54□□□□□ -0.4
CHRNB1-205ENST00000573209 SART3Q15020 963 aaKnown RBP12.53□□□□□ -0.4
CHRNB1-205ENST00000573209 CLEC17AQ6ZS10 378 aa12.53□□□□□ -0.4
CHRNB1-205ENST00000573209 RINLQ6ZS11 566 aa12.53□□□□□ -0.4
CHRNB1-205ENST00000573209 FAM184AQ8NB25 1140 aa12.53□□□□□ -0.4
CHRNB1-205ENST00000573209 FAM212AQ96EL1 285 aa12.53□□□□□ -0.4
CHRNB1-205ENST00000573209 BCL2L13Q9BXK5 485 aa12.53□□□□□ -0.4
CHRNB1-205ENST00000573209 COQ9O75208 318 aa12.52□□□□□ -0.4
CHRNB1-205ENST00000573209 RABEP1Q15276 862 aa12.52□□□□□ -0.4
CHRNB1-205ENST00000573209 ZSCAN23Q3MJ62 389 aa12.52□□□□□ -0.4
CHRNB1-205ENST00000573209 CEP89Q96ST8 783 aa12.52□□□□□ -0.4
CHRNB1-205ENST00000573209 SMC5Q8IY18 1101 aa12.52□□□□□ -0.41
CHRNB1-205ENST00000573209 PLEKHF1Q96S99 279 aa12.52□□□□□ -0.41
CHRNB1-205ENST00000573209 TRIM66O15016 1216 aa12.51□□□□□ -0.41
CHRNB1-205ENST00000573209 TPM3P06753 285 aa12.51□□□□□ -0.41
CHRNB1-205ENST00000573209 TEX35Q5T0J7 233 aa12.51□□□□□ -0.41
CHRNB1-205ENST00000573209 ZNF397Q8NF99 534 aaPredicted RBP12.51□□□□□ -0.41
CHRNB1-205ENST00000573209 CD163L1Q9NR16 1453 aa12.51□□□□□ -0.41
CHRNB1-205ENST00000573209 TMPOP42166 694 aaKnown RBP12.51□□□□□ -0.41
CHRNB1-205ENST00000573209 NUTM2DQ5VT03 806 aaPredicted RBP12.51□□□□□ -0.41
CHRNB1-205ENST00000573209 SRLQ86TD4 932 aa12.51□□□□□ -0.41
CHRNB1-205ENST00000573209 KIF1BPQ96EK5 621 aa12.51□□□□□ -0.41
CHRNB1-205ENST00000573209 REREQ9P2R6 1566 aa12.51□□□□□ -0.41
CHRNB1-205ENST00000573209 LRRC7Q96NW7 1537 aa12.5□□□□□ -0.41
CHRNB1-205ENST00000573209 ANKRD33BA6NCL7 494 aa12.5□□□□□ -0.41
CHRNB1-205ENST00000573209 HSP90AB4PQ58FF6 505 aa12.5□□□□□ -0.41
CHRNB1-205ENST00000573209 NFATC2IPQ8NCF5 419 aa12.5□□□□□ -0.41
CHRNB1-205ENST00000573209 MKL1Q969V6 931 aa12.5□□□□□ -0.41
CHRNB1-205ENST00000573209 RPS6KL1Q9Y6S9 549 aa12.5□□□□□ -0.41
CHRNB1-205ENST00000573209 ATF7IPQ6VMQ6 1270 aa12.5□□□□□ -0.41
CHRNB1-205ENST00000573209 TACO1Q9BSH4 297 aaKnown RBP12.5□□□□□ -0.41
CHRNB1-205ENST00000573209 PLEKHG2Q9H7P9 1386 aa12.49□□□□□ -0.41
CHRNB1-205ENST00000573209 PPIP5K1Q6PFW1 1433 aa12.49□□□□□ -0.41
CHRNB1-205ENST00000573209 NEFHP12036 1026 aa12.49□□□□□ -0.41
CHRNB1-205ENST00000573209 TRIM27P14373 513 aa12.49□□□□□ -0.41
CHRNB1-205ENST00000573209 IRX1P78414 480 aaPredicted RBP12.49□□□□□ -0.41
CHRNB1-205ENST00000573209 ARMCX6Q7L4S7 300 aa12.49□□□□□ -0.41
CHRNB1-205ENST00000573209 PNPLA6Q8IY17 1366 aa12.49□□□□□ -0.41
CHRNB1-205ENST00000573209 MAP2P11137 1827 aaKnown RBP12.49□□□□□ -0.41
CHRNB1-205ENST00000573209 MAGEA9P43362 315 aa12.49□□□□□ -0.41
CHRNB1-205ENST00000573209 EXOSC9Q06265 439 aaKnown RBP12.49□□□□□ -0.41
CHRNB1-205ENST00000573209 ERCC4Q92889 916 aaPredicted RBP12.49□□□□□ -0.41
CHRNB1-205ENST00000573209 CABP2Q9NPB3 220 aa12.49□□□□□ -0.41
CHRNB1-205ENST00000573209 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
CHRNB1-205ENST00000573209 ZSCAN26Q16670 478 aa12.48□□□□□ -0.41
CHRNB1-205ENST00000573209 JAKMIP3Q5VZ66 844 aa12.48□□□□□ -0.41
CHRNB1-205ENST00000573209 PRIM1P49642 420 aaKnown RBP12.48□□□□□ -0.41
CHRNB1-205ENST00000573209 ALDH1L2Q3SY69 923 aa12.48□□□□□ -0.41
CHRNB1-205ENST00000573209 KRBA2Q6ZNG9 492 aa12.48□□□□□ -0.41
CHRNB1-205ENST00000573209 CCDC191Q8NCU4 936 aa12.48□□□□□ -0.41
CHRNB1-205ENST00000573209 ZNF428Q96B54 188 aa12.48□□□□□ -0.41
CHRNB1-205ENST00000573209 RRP15Q9Y3B9 282 aaKnown RBP12.48□□□□□ -0.41
CHRNB1-205ENST00000573209 SSH1Q8WYL5 1049 aa12.47□□□□□ -0.41
CHRNB1-205ENST00000573209 TSR2Q969E8 191 aaKnown RBP12.47□□□□□ -0.41
CHRNB1-205ENST00000573209 C22orf23Q9BZE7 217 aa12.47□□□□□ -0.41
CHRNB1-205ENST00000573209 YTHDC2Q9H6S0 1430 aaKnown RBP12.47□□□□□ -0.41
CHRNB1-205ENST00000573209 DLC1Q96QB1 1528 aa12.47□□□□□ -0.41
CHRNB1-205ENST00000573209 ZBTB7CA1YPR0 619 aa12.47□□□□□ -0.41
CHRNB1-205ENST00000573209 C1QTNF12Q5T7M4 302 aa12.47□□□□□ -0.41
CHRNB1-205ENST00000573209 LRSAM1Q6UWE0 723 aa12.47□□□□□ -0.41
CHRNB1-205ENST00000573209 PACS2Q86VP3 889 aa12.47□□□□□ -0.41
CHRNB1-205ENST00000573209 ATP7BP35670 1465 aa12.46□□□□□ -0.41
CHRNB1-205ENST00000573209 ALKQ9UM73 1620 aa12.46□□□□□ -0.41
CHRNB1-205ENST00000573209 SETD1AO15047 1707 aaKnown RBP12.46□□□□□ -0.41
CHRNB1-205ENST00000573209 DLG5Q8TDM6 1919 aa12.46□□□□□ -0.41
CHRNB1-205ENST00000573209 U2SURPO15042 1029 aaKnown RBP12.46□□□□□ -0.41
CHRNB1-205ENST00000573209 GPS2Q13227 327 aa12.46□□□□□ -0.41
CHRNB1-205ENST00000573209 ITPRIPQ8IWB1 547 aa12.46□□□□□ -0.41
CHRNB1-205ENST00000573209 TSPAN18Q96SJ8 248 aa12.46□□□□□ -0.41
CHRNB1-205ENST00000573209 SUDS3Q9H7L9 328 aaPredicted RBP12.46□□□□□ -0.41
CHRNB1-205ENST00000573209 FAM135BQ49AJ0 1406 aa12.46□□□□□ -0.41
CHRNB1-205ENST00000573209 ARHGEF40Q8TER5 1519 aa12.46□□□□□ -0.42
CHRNB1-205ENST00000573209 KDM4FA0A1W2PPD8 638 aa12.45□□□□□ -0.42
CHRNB1-205ENST00000573209 SMTNL1A8MU46 457 aa12.45□□□□□ -0.42
CHRNB1-205ENST00000573209 SLFNL1Q499Z3 407 aa12.45□□□□□ -0.42
CHRNB1-205ENST00000573209 CAVIN1Q6NZI2 390 aaKnown RBP12.45□□□□□ -0.42
CHRNB1-205ENST00000573209 SNX21Q969T3 373 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms