RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 LMOD2Q6P5Q4 547 aa13.68□□□□□ -0.22
RPAIN-212ENST00000573126 RHPN1Q8TCX5 695 aa13.68□□□□□ -0.22
RPAIN-212ENST00000573126 DNAAF4Q8WXU2 420 aa13.68□□□□□ -0.22
RPAIN-212ENST00000573126 PXDNLA1KZ92 1463 aa13.67□□□□□ -0.22
RPAIN-212ENST00000573126 BEND3Q5T5X7 828 aa13.67□□□□□ -0.22
RPAIN-212ENST00000573126 ANKLE2Q86XL3 938 aa13.67□□□□□ -0.22
RPAIN-212ENST00000573126 POLA2Q14181 598 aa13.66□□□□□ -0.22
RPAIN-212ENST00000573126 NASPP49321 788 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-212ENST00000573126 TRIM44Q96DX7 344 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-212ENST00000573126 ERBB4Q15303 1308 aa13.66□□□□□ -0.22
RPAIN-212ENST00000573126 ZSCAN23Q3MJ62 389 aa13.65□□□□□ -0.22
RPAIN-212ENST00000573126 LTN1O94822 1766 aa13.65□□□□□ -0.22
RPAIN-212ENST00000573126 NFAT5O94916 1531 aa13.65□□□□□ -0.22
RPAIN-212ENST00000573126 KCNH5Q8NCM2 988 aa13.65□□□□□ -0.22
RPAIN-212ENST00000573126 PI4K2BQ8TCG2 481 aa13.65□□□□□ -0.22
RPAIN-212ENST00000573126 GPT2Q8TD30 523 aa13.65□□□□□ -0.22
RPAIN-212ENST00000573126 ORAI2Q96SN7 254 aa13.65□□□□□ -0.22
RPAIN-212ENST00000573126 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
RPAIN-212ENST00000573126 ANAPC15P60006 121 aa13.64□□□□□ -0.23
RPAIN-212ENST00000573126 AKAP4Q5JQC9 854 aa13.64□□□□□ -0.23
RPAIN-212ENST00000573126 KIF1BPQ96EK5 621 aa13.64□□□□□ -0.23
RPAIN-212ENST00000573126 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
RPAIN-212ENST00000573126 PRAMEF22A3QJZ6 481 aa13.64□□□□□ -0.23
RPAIN-212ENST00000573126 GCP02774 474 aa13.64□□□□□ -0.23
RPAIN-212ENST00000573126 MCM2P49736 904 aa13.64□□□□□ -0.23
RPAIN-212ENST00000573126 AOX1Q06278 1338 aa13.64□□□□□ -0.23
RPAIN-212ENST00000573126 ESPNB1AK53 854 aa13.63□□□□□ -0.23
RPAIN-212ENST00000573126 HOXB7P09629 217 aa13.63□□□□□ -0.23
RPAIN-212ENST00000573126 CLCN1P35523 988 aa13.63□□□□□ -0.23
RPAIN-212ENST00000573126 OS9Q13438 667 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-212ENST00000573126 PROSER3Q2NL68 480 aa13.63□□□□□ -0.23
RPAIN-212ENST00000573126 PLEKHO1Q53GL0 409 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-212ENST00000573126 ADCY9O60503 1353 aa13.63□□□□□ -0.23
RPAIN-212ENST00000573126 FOXD4L6Q3SYB3 417 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-212ENST00000573126 C1orf141Q5JVX7 400 aa13.63□□□□□ -0.23
RPAIN-212ENST00000573126 FOXD4L3Q6VB84 417 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-212ENST00000573126 CACNA1FO60840 1977 aa13.63□□□□□ -0.23
RPAIN-212ENST00000573126 NSFL1CQ9UNZ2 370 aaKnown RBP13.63□□□□□ -0.23
RPAIN-212ENST00000573126 USP54Q70EL1 1684 aa13.62□□□□□ -0.23
RPAIN-212ENST00000573126 PXDNQ92626 1479 aa13.62□□□□□ -0.23
RPAIN-212ENST00000573126 CUL4AQ13619 759 aa13.62□□□□□ -0.23
RPAIN-212ENST00000573126 DBF4Q9UBU7 674 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-212ENST00000573126 MAP3K2Q9Y2U5 619 aa13.62□□□□□ -0.23
RPAIN-212ENST00000573126 TUBGCP6Q96RT7 1819 aa13.62□□□□□ -0.23
RPAIN-212ENST00000573126 RNMTO43148 476 aaKnown RBP13.62□□□□□ -0.23
RPAIN-212ENST00000573126 HSPA4P34932 840 aa13.62□□□□□ -0.23
RPAIN-212ENST00000573126 ZNF445P59923 1031 aa13.62□□□□□ -0.23
RPAIN-212ENST00000573126 CWC27Q6UX04 472 aaKnown RBP13.62□□□□□ -0.23
RPAIN-212ENST00000573126 MED1Q15648 1581 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-212ENST00000573126 CWF19L2Q2TBE0 894 aaKnown RBP13.61□□□□□ -0.23
RPAIN-212ENST00000573126 ARHGEF25Q86VW2 580 aa13.61□□□□□ -0.23
RPAIN-212ENST00000573126 ANKRD24Q8TF21 1146 aa13.61□□□□□ -0.23
RPAIN-212ENST00000573126 C9orf78Q9NZ63 289 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-212ENST00000573126 SGSM2O43147 1006 aa13.61□□□□□ -0.23
RPAIN-212ENST00000573126 BRD1O95696 1058 aa13.61□□□□□ -0.23
RPAIN-212ENST00000573126 PRIM1P49642 420 aaKnown RBP13.61□□□□□ -0.23
RPAIN-212ENST00000573126 CNTROBQ8N137 903 aa13.61□□□□□ -0.23
RPAIN-212ENST00000573126 LARP6Q9BRS8 491 aaKnown RBP13.61□□□□□ -0.23
RPAIN-212ENST00000573126 PA2G4Q9UQ80 394 aaKnown RBP13.61□□□□□ -0.23
RPAIN-212ENST00000573126 SPG7Q9UQ90 795 aa13.61□□□□□ -0.23
RPAIN-212ENST00000573126 AXIN2Q9Y2T1 843 aa13.61□□□□□ -0.23
RPAIN-212ENST00000573126 ADGRL3Q9HAR2 1447 aa13.61□□□□□ -0.23
RPAIN-212ENST00000573126 GIGYF1O75420 1035 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-212ENST00000573126 AMOTQ4VCS5 1084 aa13.6□□□□□ -0.23
RPAIN-212ENST00000573126 ANP32BQ92688 251 aaKnown RBP13.6□□□□□ -0.23
RPAIN-212ENST00000573126 TMEM63CQ9P1W3 806 aa13.6□□□□□ -0.23
RPAIN-212ENST00000573126 RAD50Q92878 1312 aa13.6□□□□□ -0.23
RPAIN-212ENST00000573126 CCDC173Q0VFZ6 552 aa13.59□□□□□ -0.23
RPAIN-212ENST00000573126 INTS4Q96HW7 963 aaKnown RBP13.59□□□□□ -0.23
RPAIN-212ENST00000573126 RBSNQ9H1K0 784 aa13.59□□□□□ -0.23
RPAIN-212ENST00000573126 RGPD2P0DJD1 1756 aa13.59□□□□□ -0.23
RPAIN-212ENST00000573126 N4BP2Q86UW6 1770 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-212ENST00000573126 HSP90AB4PQ58FF6 505 aa13.59□□□□□ -0.23
RPAIN-212ENST00000573126 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
RPAIN-212ENST00000573126 CHMP4AQ9BY43 222 aa13.59□□□□□ -0.23
RPAIN-212ENST00000573126 SYCE3A1L190 88 aa13.58□□□□□ -0.24
RPAIN-212ENST00000573126 AIMP1Q12904 312 aaKnown RBP13.58□□□□□ -0.24
RPAIN-212ENST00000573126 CLASRPQ8N2M8 674 aaKnown RBP13.58□□□□□ -0.24
RPAIN-212ENST00000573126 GDPD2Q9HCC8 539 aa13.58□□□□□ -0.24
RPAIN-212ENST00000573126 SNX14Q9Y5W7 946 aa13.58□□□□□ -0.24
RPAIN-212ENST00000573126 NAP1L5Q96NT1 182 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-212ENST00000573126 LSG1Q9H089 658 aaKnown RBP13.58□□□□□ -0.24
RPAIN-212ENST00000573126 CHD2O14647 1828 aaKnown RBP13.58□□□□□ -0.24
RPAIN-212ENST00000573126 CPA1P15085 419 aa13.57□□□□□ -0.24
RPAIN-212ENST00000573126 KSR2Q6VAB6 950 aa13.57□□□□□ -0.24
RPAIN-212ENST00000573126 KIAA1211Q6ZU35 1233 aa13.57□□□□□ -0.24
RPAIN-212ENST00000573126 IL17RAQ96F46 866 aa13.57□□□□□ -0.24
RPAIN-212ENST00000573126 GLRX3O76003 335 aaKnown RBP13.57□□□□□ -0.24
RPAIN-212ENST00000573126 PPP1R9BQ96SB3 815 aa13.57□□□□□ -0.24
RPAIN-212ENST00000573126 KDM3BQ7LBC6 1761 aa13.57□□□□□ -0.24
RPAIN-212ENST00000573126 ZC3H6P61129 1189 aaKnown RBP13.56□□□□□ -0.24
RPAIN-212ENST00000573126 MTX1Q13505 466 aa13.56□□□□□ -0.24
RPAIN-212ENST00000573126 DIAPH3Q9NSV4 1193 aa13.56□□□□□ -0.24
RPAIN-212ENST00000573126 DTNBO60941 627 aa13.56□□□□□ -0.24
RPAIN-212ENST00000573126 IFIT2P09913 472 aaKnown RBP13.55□□□□□ -0.24
RPAIN-212ENST00000573126 SLC39A6Q13433 755 aa13.55□□□□□ -0.24
RPAIN-212ENST00000573126 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-212ENST00000573126 TTC41PQ6P2S7 1318 aa13.55□□□□□ -0.24
RPAIN-212ENST00000573126 EPB41L2O43491 1005 aaKnown RBP13.55□□□□□ -0.24
RPAIN-212ENST00000573126 ALDH1L1O75891 902 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms