RNA–Protein interactions for RNA: ENST00000572558.5

COX11-204, Transcript of cytochrome c oxidase copper chaperone COX11, humanhuman

TSL 3

Gene COX11, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX11-204ENST00000572558 NMRK2Q9NPI5 230 aa20.55■□□□□ 0.88
COX11-204ENST00000572558 CC2D1BQ5T0F9 858 aaKnown RBP20.54■□□□□ 0.88
COX11-204ENST00000572558 VSIG10Q8N0Z9 540 aa20.54■□□□□ 0.88
COX11-204ENST00000572558 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
COX11-204ENST00000572558 APLP1P51693 650 aa20.53■□□□□ 0.88
COX11-204ENST00000572558 ZBTB1Q9Y2K1 713 aa20.53■□□□□ 0.88
COX11-204ENST00000572558 COL15A1P39059 1388 aa20.53■□□□□ 0.88
COX11-204ENST00000572558 NFIXQ14938 502 aa20.52■□□□□ 0.88
COX11-204ENST00000572558 RNF181Q9P0P0 153 aa20.5■□□□□ 0.87
COX11-204ENST00000572558 UBR2Q8IWV8 1755 aa20.49■□□□□ 0.87
COX11-204ENST00000572558 AFDNP55196 1824 aaKnown RBP20.49■□□□□ 0.87
COX11-204ENST00000572558 BCL2L12Q9HB09 334 aa20.49■□□□□ 0.87
COX11-204ENST00000572558 NPC1L1Q9UHC9 1359 aa20.48■□□□□ 0.87
COX11-204ENST00000572558 NRXN2Q9P2S2 1712 aa20.48■□□□□ 0.87
COX11-204ENST00000572558 STARD3NLO95772 234 aa20.48■□□□□ 0.87
COX11-204ENST00000572558 TTC5Q8N0Z6 440 aa20.48■□□□□ 0.87
COX11-204ENST00000572558 RBM46Q8TBY0 533 aaKnown RBP20.48■□□□□ 0.87
COX11-204ENST00000572558 COL3A1P02461 1466 aaPredicted RBP20.48■□□□□ 0.87
COX11-204ENST00000572558 KDM2BQ8NHM5 1336 aa20.48■□□□□ 0.87
COX11-204ENST00000572558 SERPINB2P05120 415 aa20.47■□□□□ 0.87
COX11-204ENST00000572558 CANXP27824 592 aaKnown RBP20.47■□□□□ 0.87
COX11-204ENST00000572558 C16orf71Q8IYS4 520 aaPredicted RBP20.47■□□□□ 0.87
COX11-204ENST00000572558 SBF1O95248 1867 aa20.46■□□□□ 0.87
COX11-204ENST00000572558 EIF5P55010 431 aaKnown RBP20.46■□□□□ 0.87
COX11-204ENST00000572558 DNAJC5GQ8N7S2 189 aa20.46■□□□□ 0.87
COX11-204ENST00000572558 GNAT3A8MTJ3 354 aa20.45■□□□□ 0.86
COX11-204ENST00000572558 U2SURPO15042 1029 aaKnown RBP20.45■□□□□ 0.86
COX11-204ENST00000572558 IL17REQ8NFR9 667 aa20.45■□□□□ 0.86
COX11-204ENST00000572558 GAS2L2Q8NHY3 880 aa20.45■□□□□ 0.86
COX11-204ENST00000572558 A0A087WZG4 1122 aa20.44■□□□□ 0.86
COX11-204ENST00000572558 TEFQ10587 303 aa20.44■□□□□ 0.86
COX11-204ENST00000572558 ZNF496Q96IT1 587 aaPredicted RBP20.44■□□□□ 0.86
COX11-204ENST00000572558 CNGB1Q14028 1251 aaPredicted RBP20.43■□□□□ 0.86
COX11-204ENST00000572558 ZNF790Q6PG37 636 aa20.43■□□□□ 0.86
COX11-204ENST00000572558 TTLL6Q8N841 843 aa20.43■□□□□ 0.86
COX11-204ENST00000572558 TEX13AQ9BXU3 409 aaPredicted RBP20.43■□□□□ 0.86
COX11-204ENST00000572558 ZC3H4Q9UPT8 1303 aaKnown RBP20.43■□□□□ 0.86
COX11-204ENST00000572558 DLEC1Q9Y238 1755 aa20.43■□□□□ 0.86
COX11-204ENST00000572558 HEG1Q9ULI3 1381 aa20.43■□□□□ 0.86
COX11-204ENST00000572558 RASSF7Q02833 373 aa20.42■□□□□ 0.86
COX11-204ENST00000572558 FSTL1Q12841 308 aa20.42■□□□□ 0.86
COX11-204ENST00000572558 C2CD5Q86YS7 1000 aa20.42■□□□□ 0.86
COX11-204ENST00000572558 RRAGCQ9HB90 399 aa20.42■□□□□ 0.86
COX11-204ENST00000572558 H0YIN7 160 aa20.41■□□□□ 0.86
COX11-204ENST00000572558 LMNB1P20700 586 aa20.41■□□□□ 0.86
COX11-204ENST00000572558 BICDL1Q6ZP65 573 aa20.41■□□□□ 0.86
COX11-204ENST00000572558 CARMIL3Q8ND23 1372 aa20.41■□□□□ 0.86
COX11-204ENST00000572558 SIPA1L3O60292 1781 aaPredicted RBP20.41■□□□□ 0.86
COX11-204ENST00000572558 TNRC6CQ9HCJ0 1690 aaKnown RBP20.4■□□□□ 0.86
COX11-204ENST00000572558 WDR90Q96KV7 1748 aa20.39■□□□□ 0.86
COX11-204ENST00000572558 IL6STP40189 918 aaPredicted RBP20.39■□□□□ 0.85
COX11-204ENST00000572558 PRELPP51888 382 aa20.39■□□□□ 0.85
COX11-204ENST00000572558 TBC1D9BQ66K14 1250 aa20.39■□□□□ 0.85
COX11-204ENST00000572558 FMNL2Q96PY5 1086 aa20.39■□□□□ 0.85
COX11-204ENST00000572558 CEMIPQ8WUJ3 1361 aa20.38■□□□□ 0.85
COX11-204ENST00000572558 TBC1D2BQ9UPU7 963 aa20.38■□□□□ 0.85
COX11-204ENST00000572558 PHACTR3Q96KR7 559 aa20.37■□□□□ 0.85
COX11-204ENST00000572558 BRIP1Q9BX63 1249 aa20.37■□□□□ 0.85
COX11-204ENST00000572558 PDZRN3Q9UPQ7 1066 aa20.37■□□□□ 0.85
COX11-204ENST00000572558 ZNF330Q9Y3S2 320 aaPredicted RBP20.37■□□□□ 0.85
COX11-204ENST00000572558 SCN7AQ01118 1682 aa20.37■□□□□ 0.85
COX11-204ENST00000572558 GLTPD2A6NH11 291 aa20.36■□□□□ 0.85
COX11-204ENST00000572558 RSPH6AQ9H0K4 717 aa20.36■□□□□ 0.85
COX11-204ENST00000572558 PCNTO95613 3336 aa20.36■□□□□ 0.85
COX11-204ENST00000572558 BTBD11A6QL63 1104 aa20.35■□□□□ 0.85
COX11-204ENST00000572558 NFKBIEO00221 500 aa20.35■□□□□ 0.85
COX11-204ENST00000572558 A1BGP04217 495 aa20.35■□□□□ 0.85
COX11-204ENST00000572558 PRKAR2BP31323 418 aa20.35■□□□□ 0.85
COX11-204ENST00000572558 PDE6BP35913 854 aa20.35■□□□□ 0.85
COX11-204ENST00000572558 PRR5LQ6MZQ0 368 aa20.35■□□□□ 0.85
COX11-204ENST00000572558 SMC1BQ8NDV3 1235 aa20.35■□□□□ 0.85
COX11-204ENST00000572558 CFAP53Q96M91 514 aa20.35■□□□□ 0.85
COX11-204ENST00000572558 ANKRD31Q8N7Z5 1873 aa20.35■□□□□ 0.85
COX11-204ENST00000572558 KCNQ3O43525 872 aa20.34■□□□□ 0.85
COX11-204ENST00000572558 HTRA3P83110 453 aa20.34■□□□□ 0.85
COX11-204ENST00000572558 NPM2Q86SE8 214 aaKnown RBP20.34■□□□□ 0.85
COX11-204ENST00000572558 ZNF622Q969S3 477 aaKnown RBP eCLIP20.34■□□□□ 0.85
COX11-204ENST00000572558 KLRG1Q96E93 195 aa20.34■□□□□ 0.85
COX11-204ENST00000572558 CAMTA2O94983 1202 aa20.33■□□□□ 0.85
COX11-204ENST00000572558 VEGFAP15692 232 aaPredicted RBP20.33■□□□□ 0.85
COX11-204ENST00000572558 CCDC88AQ3V6T2 1871 aa20.33■□□□□ 0.84
COX11-204ENST00000572558 CCDC24Q8N4L8 307 aa20.32■□□□□ 0.84
COX11-204ENST00000572558 SETDB2Q96T68 719 aa20.32■□□□□ 0.84
COX11-204ENST00000572558 NUDCQ9Y266 331 aa20.32■□□□□ 0.84
COX11-204ENST00000572558 TIAM2Q8IVF5 1701 aa20.31■□□□□ 0.84
COX11-204ENST00000572558 C21orf2O43822 256 aa20.31■□□□□ 0.84
COX11-204ENST00000572558 COL11A2P13942 1736 aaPredicted RBP20.3■□□□□ 0.84
COX11-204ENST00000572558 DZIP3Q86Y13 1208 aaKnown RBP20.3■□□□□ 0.84
COX11-204ENST00000572558 JMYQ8N9B5 988 aa20.3■□□□□ 0.84
COX11-204ENST00000572558 CNBD1Q8NA66 436 aa20.3■□□□□ 0.84
COX11-204ENST00000572558 ZNF219Q9P2Y4 722 aaPredicted RBP20.29■□□□□ 0.84
COX11-204ENST00000572558 USP16Q9Y5T5 823 aa20.29■□□□□ 0.84
COX11-204ENST00000572558 NPHP1O15259 732 aa20.28■□□□□ 0.84
COX11-204ENST00000572558 U2AF1L5P0DN76 240 aaPredicted RBP20.28■□□□□ 0.84
COX11-204ENST00000572558 ST5P78524 1137 aa20.28■□□□□ 0.84
COX11-204ENST00000572558 U2AF1Q01081 240 aaKnown RBP eCLIP20.28■□□□□ 0.84
COX11-204ENST00000572558 RTF1Q92541 710 aaKnown RBP20.28■□□□□ 0.84
COX11-204ENST00000572558 BCORQ6W2J9 1755 aa20.28■□□□□ 0.84
COX11-204ENST00000572558 FER1L6Q2WGJ9 1857 aa20.28■□□□□ 0.84
COX11-204ENST00000572558 SNRPA1P09661 255 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms