RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 PHACTR3Q96KR7 559 aa22.28■■□□□ 1.16
RAB40B-205ENST00000571880 DLEC1Q9Y238 1755 aa22.27■■□□□ 1.16
RAB40B-205ENST00000571880 GNAT3A8MTJ3 354 aa22.27■■□□□ 1.16
RAB40B-205ENST00000571880 TEFQ10587 303 aa22.27■■□□□ 1.16
RAB40B-205ENST00000571880 TTC5Q8N0Z6 440 aa22.27■■□□□ 1.16
RAB40B-205ENST00000571880 RSPH6AQ9H0K4 717 aa22.27■■□□□ 1.16
RAB40B-205ENST00000571880 NRXN2Q9P2S2 1712 aa22.27■■□□□ 1.16
RAB40B-205ENST00000571880 CACNA1SQ13698 1873 aa22.26■■□□□ 1.15
RAB40B-205ENST00000571880 CANXP27824 592 aaKnown RBP22.26■■□□□ 1.15
RAB40B-205ENST00000571880 ZPR1O75312 459 aa22.25■■□□□ 1.15
RAB40B-205ENST00000571880 ZNF330Q9Y3S2 320 aaPredicted RBP22.25■■□□□ 1.15
RAB40B-205ENST00000571880 BCORQ6W2J9 1755 aa22.25■■□□□ 1.15
RAB40B-205ENST00000571880 ANKRD31Q8N7Z5 1873 aa22.24■■□□□ 1.15
RAB40B-205ENST00000571880 FCHSD2O94868 740 aa22.24■■□□□ 1.15
RAB40B-205ENST00000571880 U2AF1L5P0DN76 240 aaPredicted RBP22.24■■□□□ 1.15
RAB40B-205ENST00000571880 TGFB2P61812 414 aa22.24■■□□□ 1.15
RAB40B-205ENST00000571880 U2AF1Q01081 240 aaKnown RBP eCLIP22.24■■□□□ 1.15
RAB40B-205ENST00000571880 ZNF496Q96IT1 587 aaPredicted RBP22.24■■□□□ 1.15
RAB40B-205ENST00000571880 POLRMTO00411 1230 aaKnown RBP22.23■■□□□ 1.15
RAB40B-205ENST00000571880 CHRNA5P30532 468 aa22.23■■□□□ 1.15
RAB40B-205ENST00000571880 SBF1O95248 1867 aa22.22■■□□□ 1.15
RAB40B-205ENST00000571880 KCNQ3O43525 872 aa22.22■■□□□ 1.15
RAB40B-205ENST00000571880 GPBP1L1Q9HC44 474 aaPredicted RBP22.22■■□□□ 1.15
RAB40B-205ENST00000571880 COL11A2P13942 1736 aaPredicted RBP22.22■■□□□ 1.15
RAB40B-205ENST00000571880 HEG1Q9ULI3 1381 aa22.22■■□□□ 1.15
RAB40B-205ENST00000571880 CCDC88AQ3V6T2 1871 aa22.22■■□□□ 1.15
RAB40B-205ENST00000571880 NFIXQ14938 502 aa22.2■■□□□ 1.14
RAB40B-205ENST00000571880 ZNF790Q6PG37 636 aa22.2■■□□□ 1.14
RAB40B-205ENST00000571880 BICDL1Q6ZP65 573 aa22.2■■□□□ 1.14
RAB40B-205ENST00000571880 ARHGAP27Q6ZUM4 889 aa22.2■■□□□ 1.14
RAB40B-205ENST00000571880 BCL2L12Q9HB09 334 aa22.2■■□□□ 1.14
RAB40B-205ENST00000571880 NARFQ9UHQ1 456 aa22.2■■□□□ 1.14
RAB40B-205ENST00000571880 NUDCQ9Y266 331 aa22.2■■□□□ 1.14
RAB40B-205ENST00000571880 CARMIL3Q8ND23 1372 aa22.2■■□□□ 1.14
RAB40B-205ENST00000571880 CEMIPQ8WUJ3 1361 aa22.2■■□□□ 1.14
RAB40B-205ENST00000571880 KCNA3P22001 575 aa22.19■■□□□ 1.14
RAB40B-205ENST00000571880 MCM10Q7L590 875 aa22.19■■□□□ 1.14
RAB40B-205ENST00000571880 VSIG10Q8N0Z9 540 aa22.19■■□□□ 1.14
RAB40B-205ENST00000571880 LAMB4A4D0S4 1761 aa22.19■■□□□ 1.14
RAB40B-205ENST00000571880 TM4SF1P30408 202 aa22.18■■□□□ 1.14
RAB40B-205ENST00000571880 PIP4K2AP48426 406 aaPredicted RBP22.18■■□□□ 1.14
RAB40B-205ENST00000571880 DCTN1Q14203 1278 aa22.18■■□□□ 1.14
RAB40B-205ENST00000571880 BTBD11A6QL63 1104 aa22.16■■□□□ 1.14
RAB40B-205ENST00000571880 STARD3NLO95772 234 aa22.16■■□□□ 1.14
RAB40B-205ENST00000571880 KDM3BQ7LBC6 1761 aa22.16■■□□□ 1.14
RAB40B-205ENST00000571880 PRAMEF22A3QJZ6 481 aa22.15■■□□□ 1.14
RAB40B-205ENST00000571880 FMNL2Q96PY5 1086 aa22.15■■□□□ 1.14
RAB40B-205ENST00000571880 PIM2Q9P1W9 311 aa22.15■■□□□ 1.14
RAB40B-205ENST00000571880 TIAM2Q8IVF5 1701 aa22.14■■□□□ 1.14
RAB40B-205ENST00000571880 A1BGP04217 495 aa22.14■■□□□ 1.13
RAB40B-205ENST00000571880 EIF5P55010 431 aaKnown RBP22.14■■□□□ 1.13
RAB40B-205ENST00000571880 DALRD3Q5D0E6 543 aaKnown RBP22.14■■□□□ 1.13
RAB40B-205ENST00000571880 TBC1D2BQ9UPU7 963 aa22.14■■□□□ 1.13
RAB40B-205ENST00000571880 SERPINB2P05120 415 aa22.13■■□□□ 1.13
RAB40B-205ENST00000571880 CCDC24Q8N4L8 307 aa22.13■■□□□ 1.13
RAB40B-205ENST00000571880 RTF1Q92541 710 aaKnown RBP22.13■■□□□ 1.13
RAB40B-205ENST00000571880 TBC1D9BQ66K14 1250 aa22.12■■□□□ 1.13
RAB40B-205ENST00000571880 C9orf131Q5VYM1 1079 aa22.1■■□□□ 1.13
RAB40B-205ENST00000571880 RASSF7Q02833 373 aa22.09■■□□□ 1.13
RAB40B-205ENST00000571880 USP16Q9Y5T5 823 aa22.09■■□□□ 1.13
RAB40B-205ENST00000571880 A0A087WZG4 1122 aa22.08■■□□□ 1.13
RAB40B-205ENST00000571880 MIS18AQ9NYP9 233 aa22.08■■□□□ 1.13
RAB40B-205ENST00000571880 KIF3CO14782 793 aa22.07■■□□□ 1.12
RAB40B-205ENST00000571880 C2CD5Q86YS7 1000 aa22.07■■□□□ 1.12
RAB40B-205ENST00000571880 TEX13AQ9BXU3 409 aaPredicted RBP22.07■■□□□ 1.12
RAB40B-205ENST00000571880 RNF181Q9P0P0 153 aa22.07■■□□□ 1.12
RAB40B-205ENST00000571880 TNRC6CQ9HCJ0 1690 aaKnown RBP22.07■■□□□ 1.12
RAB40B-205ENST00000571880 ARFGEF2Q9Y6D5 1785 aa22.07■■□□□ 1.12
RAB40B-205ENST00000571880 IL6STP40189 918 aaPredicted RBP22.06■■□□□ 1.12
RAB40B-205ENST00000571880 THUMPD2Q9BTF0 503 aaKnown RBP22.06■■□□□ 1.12
RAB40B-205ENST00000571880 NMRK2Q9NPI5 230 aa22.06■■□□□ 1.12
RAB40B-205ENST00000571880 SLX4Q8IY92 1834 aa22.06■■□□□ 1.12
RAB40B-205ENST00000571880 CAMTA2O94983 1202 aa22.05■■□□□ 1.12
RAB40B-205ENST00000571880 DZIP3Q86Y13 1208 aaKnown RBP22.05■■□□□ 1.12
RAB40B-205ENST00000571880 NUP98P52948 1817 aa22.04■■□□□ 1.12
RAB40B-205ENST00000571880 NPM2Q86SE8 214 aaKnown RBP22.04■■□□□ 1.12
RAB40B-205ENST00000571880 ZNF219Q9P2Y4 722 aaPredicted RBP22.04■■□□□ 1.12
RAB40B-205ENST00000571880 FER1L6Q2WGJ9 1857 aa22.04■■□□□ 1.12
RAB40B-205ENST00000571880 PRR5LQ6MZQ0 368 aa22.03■■□□□ 1.12
RAB40B-205ENST00000571880 DICER1Q9UPY3 1922 aaKnown RBP22.02■■□□□ 1.12
RAB40B-205ENST00000571880 NPHP1O15259 732 aa22.02■■□□□ 1.12
RAB40B-205ENST00000571880 NEFMP07197 916 aa22.01■■□□□ 1.11
RAB40B-205ENST00000571880 SNRPA1P09661 255 aaKnown RBP22.01■■□□□ 1.11
RAB40B-205ENST00000571880 ZNF622Q969S3 477 aaKnown RBP eCLIP22.01■■□□□ 1.11
RAB40B-205ENST00000571880 NBPF26B4DH59 902 aa22■■□□□ 1.11
RAB40B-205ENST00000571880 H0YIN7 160 aa22■■□□□ 1.11
RAB40B-205ENST00000571880 NBPF10Q6P3W6 841 aaKnown RBP22■■□□□ 1.11
RAB40B-205ENST00000571880 NBPF15Q8N660 670 aa22■■□□□ 1.11
RAB40B-205ENST00000571880 CNBD1Q8NA66 436 aa22■■□□□ 1.11
RAB40B-205ENST00000571880 PLEKHF1Q96S99 279 aa22■■□□□ 1.11
RAB40B-205ENST00000571880 CEP350Q5VT06 3117 aa22■■□□□ 1.11
RAB40B-205ENST00000571880 MAPK8IP3Q9UPT6 1336 aa22■■□□□ 1.11
RAB40B-205ENST00000571880 PRELPP51888 382 aa21.99■■□□□ 1.11
RAB40B-205ENST00000571880 TAF7Q15545 349 aaPredicted RBP21.99■■□□□ 1.11
RAB40B-205ENST00000571880 TTLL6Q8N841 843 aa21.99■■□□□ 1.11
RAB40B-205ENST00000571880 FAM177BA6PVY3 158 aa21.98■■□□□ 1.11
RAB40B-205ENST00000571880 HTATSF1O43719 755 aaKnown RBP21.98■■□□□ 1.11
RAB40B-205ENST00000571880 DDX10Q13206 875 aaKnown RBP21.98■■□□□ 1.11
RAB40B-205ENST00000571880 NFE2L2Q16236 605 aa21.98■■□□□ 1.11
RAB40B-205ENST00000571880 SETDB2Q96T68 719 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms