RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 TTC5Q8N0Z6 440 aa20.95■□□□□ 0.94
TSR1-202ENST00000571806 KCPQ6ZWJ8 1503 aa20.94■□□□□ 0.94
TSR1-202ENST00000571806 STARD3NLO95772 234 aa20.94■□□□□ 0.94
TSR1-202ENST00000571806 GAS2L2Q8NHY3 880 aa20.94■□□□□ 0.94
TSR1-202ENST00000571806 COL15A1P39059 1388 aa20.94■□□□□ 0.94
TSR1-202ENST00000571806 TEX13AQ9BXU3 409 aaPredicted RBP20.93■□□□□ 0.94
TSR1-202ENST00000571806 GNAT3A8MTJ3 354 aa20.92■□□□□ 0.94
TSR1-202ENST00000571806 C9orf131Q5VYM1 1079 aa20.92■□□□□ 0.94
TSR1-202ENST00000571806 ZBTB1Q9Y2K1 713 aa20.92■□□□□ 0.94
TSR1-202ENST00000571806 A0A087WZG4 1122 aa20.91■□□□□ 0.94
TSR1-202ENST00000571806 U2SURPO15042 1029 aaKnown RBP20.91■□□□□ 0.94
TSR1-202ENST00000571806 TEFQ10587 303 aa20.91■□□□□ 0.94
TSR1-202ENST00000571806 UBR2Q8IWV8 1755 aa20.91■□□□□ 0.94
TSR1-202ENST00000571806 APLP1P51693 650 aa20.9■□□□□ 0.94
TSR1-202ENST00000571806 NFIXQ14938 502 aa20.9■□□□□ 0.94
TSR1-202ENST00000571806 COL3A1P02461 1466 aaPredicted RBP20.89■□□□□ 0.94
TSR1-202ENST00000571806 KDM2BQ8NHM5 1336 aa20.89■□□□□ 0.93
TSR1-202ENST00000571806 CHRNA5P30532 468 aa20.89■□□□□ 0.93
TSR1-202ENST00000571806 NRXN2Q9P2S2 1712 aa20.88■□□□□ 0.93
TSR1-202ENST00000571806 SERPINB2P05120 415 aa20.88■□□□□ 0.93
TSR1-202ENST00000571806 CANXP27824 592 aaKnown RBP20.88■□□□□ 0.93
TSR1-202ENST00000571806 ZNF790Q6PG37 636 aa20.88■□□□□ 0.93
TSR1-202ENST00000571806 CFAP53Q96M91 514 aa20.88■□□□□ 0.93
TSR1-202ENST00000571806 ZC3H4Q9UPT8 1303 aaKnown RBP20.87■□□□□ 0.93
TSR1-202ENST00000571806 EIF5P55010 431 aaKnown RBP20.87■□□□□ 0.93
TSR1-202ENST00000571806 C16orf71Q8IYS4 520 aaPredicted RBP20.87■□□□□ 0.93
TSR1-202ENST00000571806 RNF181Q9P0P0 153 aa20.87■□□□□ 0.93
TSR1-202ENST00000571806 PDZRN3Q9UPQ7 1066 aa20.87■□□□□ 0.93
TSR1-202ENST00000571806 AFDNP55196 1824 aaKnown RBP20.86■□□□□ 0.93
TSR1-202ENST00000571806 IL17REQ8NFR9 667 aa20.86■□□□□ 0.93
TSR1-202ENST00000571806 RBM46Q8TBY0 533 aaKnown RBP20.86■□□□□ 0.93
TSR1-202ENST00000571806 BCL2L12Q9HB09 334 aa20.86■□□□□ 0.93
TSR1-202ENST00000571806 HEG1Q9ULI3 1381 aa20.85■□□□□ 0.93
TSR1-202ENST00000571806 NPM2Q86SE8 214 aaKnown RBP20.85■□□□□ 0.93
TSR1-202ENST00000571806 FMNL2Q96PY5 1086 aa20.85■□□□□ 0.93
TSR1-202ENST00000571806 NMRK2Q9NPI5 230 aa20.85■□□□□ 0.93
TSR1-202ENST00000571806 NUDCQ9Y266 331 aa20.85■□□□□ 0.93
TSR1-202ENST00000571806 H0YIN7 160 aa20.84■□□□□ 0.93
TSR1-202ENST00000571806 TTLL6Q8N841 843 aa20.84■□□□□ 0.93
TSR1-202ENST00000571806 ZNF496Q96IT1 587 aaPredicted RBP20.84■□□□□ 0.93
TSR1-202ENST00000571806 CEMIPQ8WUJ3 1361 aa20.84■□□□□ 0.93
TSR1-202ENST00000571806 IL6STP40189 918 aaPredicted RBP20.83■□□□□ 0.93
TSR1-202ENST00000571806 FSTL1Q12841 308 aa20.83■□□□□ 0.93
TSR1-202ENST00000571806 IFFO2Q5TF58 517 aa20.83■□□□□ 0.93
TSR1-202ENST00000571806 SIPA1L3O60292 1781 aaPredicted RBP20.82■□□□□ 0.92
TSR1-202ENST00000571806 DLEC1Q9Y238 1755 aa20.82■□□□□ 0.92
TSR1-202ENST00000571806 SBF1O95248 1867 aa20.82■□□□□ 0.92
TSR1-202ENST00000571806 LMNB1P20700 586 aa20.81■□□□□ 0.92
TSR1-202ENST00000571806 CNGB1Q14028 1251 aaPredicted RBP20.81■□□□□ 0.92
TSR1-202ENST00000571806 C2CD5Q86YS7 1000 aa20.81■□□□□ 0.92
TSR1-202ENST00000571806 BTBD11A6QL63 1104 aa20.8■□□□□ 0.92
TSR1-202ENST00000571806 PDE6BP35913 854 aa20.8■□□□□ 0.92
TSR1-202ENST00000571806 TNRC6CQ9HCJ0 1690 aaKnown RBP20.8■□□□□ 0.92
TSR1-202ENST00000571806 PRKAR2BP31323 418 aa20.79■□□□□ 0.92
TSR1-202ENST00000571806 BRIP1Q9BX63 1249 aa20.79■□□□□ 0.92
TSR1-202ENST00000571806 RSPH6AQ9H0K4 717 aa20.79■□□□□ 0.92
TSR1-202ENST00000571806 CARMIL3Q8ND23 1372 aa20.79■□□□□ 0.92
TSR1-202ENST00000571806 TBC1D9BQ66K14 1250 aa20.78■□□□□ 0.92
TSR1-202ENST00000571806 BICDL1Q6ZP65 573 aa20.78■□□□□ 0.92
TSR1-202ENST00000571806 RTF1Q92541 710 aaKnown RBP20.78■□□□□ 0.92
TSR1-202ENST00000571806 PHACTR3Q96KR7 559 aa20.77■□□□□ 0.92
TSR1-202ENST00000571806 SETDB2Q96T68 719 aa20.77■□□□□ 0.92
TSR1-202ENST00000571806 RRAGCQ9HB90 399 aa20.77■□□□□ 0.92
TSR1-202ENST00000571806 ZNF330Q9Y3S2 320 aaPredicted RBP20.77■□□□□ 0.92
TSR1-202ENST00000571806 SCN7AQ01118 1682 aa20.77■□□□□ 0.91
TSR1-202ENST00000571806 DNAJC5GQ8N7S2 189 aa20.76■□□□□ 0.91
TSR1-202ENST00000571806 TBC1D2BQ9UPU7 963 aa20.76■□□□□ 0.91
TSR1-202ENST00000571806 GLTPD2A6NH11 291 aa20.75■□□□□ 0.91
TSR1-202ENST00000571806 HTATSF1O43719 755 aaKnown RBP20.75■□□□□ 0.91
TSR1-202ENST00000571806 A1BGP04217 495 aa20.75■□□□□ 0.91
TSR1-202ENST00000571806 RASSF7Q02833 373 aa20.75■□□□□ 0.91
TSR1-202ENST00000571806 U2AF1L5P0DN76 240 aaPredicted RBP20.74■□□□□ 0.91
TSR1-202ENST00000571806 U2AF1Q01081 240 aaKnown RBP eCLIP20.74■□□□□ 0.91
TSR1-202ENST00000571806 PRR5LQ6MZQ0 368 aa20.74■□□□□ 0.91
TSR1-202ENST00000571806 CLEC4GQ6UXB4 293 aa20.74■□□□□ 0.91
TSR1-202ENST00000571806 SMC1BQ8NDV3 1235 aa20.74■□□□□ 0.91
TSR1-202ENST00000571806 NPHP1O15259 732 aa20.73■□□□□ 0.91
TSR1-202ENST00000571806 SNRPA1P09661 255 aaKnown RBP20.73■□□□□ 0.91
TSR1-202ENST00000571806 VEGFAP15692 232 aaPredicted RBP20.73■□□□□ 0.91
TSR1-202ENST00000571806 PPP2R1AP30153 589 aa20.73■□□□□ 0.91
TSR1-202ENST00000571806 ST5P78524 1137 aa20.73■□□□□ 0.91
TSR1-202ENST00000571806 DPY19L2Q6NUT2 758 aa20.73■□□□□ 0.91
TSR1-202ENST00000571806 ZNF622Q969S3 477 aaKnown RBP eCLIP20.73■□□□□ 0.913e-8■□□□□ 10.9
TSR1-202ENST00000571806 WDR90Q96KV7 1748 aa20.73■□□□□ 0.91
TSR1-202ENST00000571806 RGL2O15211 777 aa20.72■□□□□ 0.91
TSR1-202ENST00000571806 CAMTA2O94983 1202 aa20.72■□□□□ 0.91
TSR1-202ENST00000571806 DZIP3Q86Y13 1208 aaKnown RBP20.72■□□□□ 0.91
TSR1-202ENST00000571806 CNBD1Q8NA66 436 aa20.72■□□□□ 0.91
TSR1-202ENST00000571806 ZNF652Q9Y2D9 606 aa20.72■□□□□ 0.91
TSR1-202ENST00000571806 CNKSR1Q969H4 720 aa20.71■□□□□ 0.91
TSR1-202ENST00000571806 USP16Q9Y5T5 823 aa20.71■□□□□ 0.91
TSR1-202ENST00000571806 NFKBIEO00221 500 aa20.7■□□□□ 0.9
TSR1-202ENST00000571806 KCNQ3O43525 872 aa20.7■□□□□ 0.9
TSR1-202ENST00000571806 SOGA3Q5TF21 947 aa20.7■□□□□ 0.9
TSR1-202ENST00000571806 STYK1Q6J9G0 422 aa20.7■□□□□ 0.9
TSR1-202ENST00000571806 ANKRD31Q8N7Z5 1873 aa20.7■□□□□ 0.9
TSR1-202ENST00000571806 NEFMP07197 916 aa20.69■□□□□ 0.9
TSR1-202ENST00000571806 BCORQ6W2J9 1755 aa20.69■□□□□ 0.9
TSR1-202ENST00000571806 C21orf2O43822 256 aa20.68■□□□□ 0.9
TSR1-202ENST00000571806 PRELPP51888 382 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms