RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 PALLDQ8WX93 1383 aa15.18■□□□□ 0.02
CDRT1-206ENST00000571263 DDX58O95786 925 aaKnown RBP15.17■□□□□ 0.02
CDRT1-206ENST00000571263 ZNF831Q5JPB2 1677 aa15.16■□□□□ 0.02
CDRT1-206ENST00000571263 LOC102724428A0A0B4J2F2 783 aa15.16■□□□□ 0.02
CDRT1-206ENST00000571263 PLIN1O60240 522 aa15.16■□□□□ 0.02
CDRT1-206ENST00000571263 ATP6V1AP38606 617 aa15.16■□□□□ 0.02
CDRT1-206ENST00000571263 SIK1P57059 783 aa15.16■□□□□ 0.02
CDRT1-206ENST00000571263 FLIIQ13045 1269 aa15.16■□□□□ 0.02
CDRT1-206ENST00000571263 CHPF2Q9P2E5 772 aa15.16■□□□□ 0.02
CDRT1-206ENST00000571263 RGS12O14924 1447 aa15.16■□□□□ 0.02
CDRT1-206ENST00000571263 LAMB4A4D0S4 1761 aa15.16■□□□□ 0.02
CDRT1-206ENST00000571263 BRWD3Q6RI45 1802 aa15.15■□□□□ 0.02
CDRT1-206ENST00000571263 TCERG1O14776 1098 aaKnown RBP15.15■□□□□ 0.02
CDRT1-206ENST00000571263 TRIM27P14373 513 aa15.15■□□□□ 0.02
CDRT1-206ENST00000571263 FKBP8Q14318 412 aa15.15■□□□□ 0.02
CDRT1-206ENST00000571263 NPM2Q86SE8 214 aaKnown RBP15.15■□□□□ 0.02
CDRT1-206ENST00000571263 NECTIN2Q92692 538 aa15.15■□□□□ 0.02
CDRT1-206ENST00000571263 PRAMEF22A3QJZ6 481 aa15.14■□□□□ 0.01
CDRT1-206ENST00000571263 FKBP5Q13451 457 aaPredicted RBP15.14■□□□□ 0.01
CDRT1-206ENST00000571263 FAM182BQ5T319 152 aa15.14■□□□□ 0.01
CDRT1-206ENST00000571263 DNAJC10Q8IXB1 793 aa15.14■□□□□ 0.01
CDRT1-206ENST00000571263 SBF2Q86WG5 1849 aa15.14■□□□□ 0.01
CDRT1-206ENST00000571263 CICQ96RK0 1608 aaPredicted RBP15.14■□□□□ 0.01
CDRT1-206ENST00000571263 KAT6BQ8WYB5 2073 aa15.13■□□□□ 0.01
CDRT1-206ENST00000571263 CYP19A1P11511 503 aaPredicted RBP15.13■□□□□ 0.01
CDRT1-206ENST00000571263 CCT4P50991 539 aaKnown RBP15.13■□□□□ 0.01
CDRT1-206ENST00000571263 PDIA6Q15084 440 aa15.13■□□□□ 0.01
CDRT1-206ENST00000571263 SLC27A3Q5K4L6 730 aa15.13■□□□□ 0.01
CDRT1-206ENST00000571263 DDX19BQ9UMR2 479 aa15.13■□□□□ 0.01
CDRT1-206ENST00000571263 GTF3C3Q9Y5Q9 886 aa15.13■□□□□ 0.01
CDRT1-206ENST00000571263 PLSCR1O15162 318 aa15.12■□□□□ 0.01
CDRT1-206ENST00000571263 RC3H1Q5TC82 1133 aaKnown RBP15.12■□□□□ 0.01
CDRT1-206ENST00000571263 KSR2Q6VAB6 950 aa15.12■□□□□ 0.01
CDRT1-206ENST00000571263 C5P01031 1676 aa15.12■□□□□ 0.01
CDRT1-206ENST00000571263 BTAF1O14981 1849 aa15.11■□□□□ 0.01
CDRT1-206ENST00000571263 TRIM37O94972 964 aa15.11■□□□□ 0.01
CDRT1-206ENST00000571263 IL6STP40189 918 aaPredicted RBP15.11■□□□□ 0.01
CDRT1-206ENST00000571263 MVPQ14764 893 aaKnown RBP15.11■□□□□ 0.01
CDRT1-206ENST00000571263 INTS3Q68E01 1043 aaKnown RBP15.11■□□□□ 0.01
CDRT1-206ENST00000571263 G2E3Q7L622 706 aa15.11■□□□□ 0.01
CDRT1-206ENST00000571263 SLC4A9Q96Q91 983 aa15.11■□□□□ 0.01
CDRT1-206ENST00000571263 PHAXQ9H814 394 aaKnown RBP15.11■□□□□ 0.01
CDRT1-206ENST00000571263 ABCC4O15439 1325 aa15.11■□□□□ 0.01
CDRT1-206ENST00000571263 A1BGP04217 495 aa15.1■□□□□ 0.01
CDRT1-206ENST00000571263 MYL6BP14649 208 aa15.1■□□□□ 0.01
CDRT1-206ENST00000571263 CLUAP1Q96AJ1 413 aa15.1■□□□□ 0.01
CDRT1-206ENST00000571263 CCNL1Q9UK58 526 aaPredicted RBP15.1■□□□□ 0.01
CDRT1-206ENST00000571263 A0A087WZG4 1122 aa15.09■□□□□ 0.01
CDRT1-206ENST00000571263 C20orf194Q5TEA3 1177 aa15.09■□□□□ 0.01
CDRT1-206ENST00000571263 ANKRD13DQ6ZTN6 518 aa15.09■□□□□ 0.01
CDRT1-206ENST00000571263 COPS6Q7L5N1 327 aa15.09■□□□□ 0.01
CDRT1-206ENST00000571263 PANK1Q8TE04 598 aa15.09■□□□□ 0.01
CDRT1-206ENST00000571263 CCDC87Q9NVE4 849 aa15.09■□□□□ 0.01
CDRT1-206ENST00000571263 HDAC5Q9UQL6 1122 aa15.09■□□□□ 0.01
CDRT1-206ENST00000571263 PXDNLA1KZ92 1463 aa15.08■□□□□ 0.01
CDRT1-206ENST00000571263 PI4KAP2A4QPH2 592 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 NBPF26B4DH59 902 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 IRX6P78412 446 aaPredicted RBP15.08■□□□□ 0
CDRT1-206ENST00000571263 NEXNQ0ZGT2 675 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 NBPF14Q5TI25 921 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 NBPF10Q6P3W6 841 aaKnown RBP15.08■□□□□ 0
CDRT1-206ENST00000571263 LRP10Q7Z4F1 713 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 RIC3Q7Z5B4 369 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 CCDC125Q86Z20 511 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 ITPRIPQ8IWB1 547 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 NBPF15Q8N660 670 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 PI4KAP1Q8N8J0 262 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 PLBD2Q8NHP8 589 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 XAGE3Q8WTP9 111 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 DNAAF4Q8WXU2 420 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 CRBNQ96SW2 442 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 COG6Q9Y2V7 657 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 CNTNAP4Q9C0A0 1308 aa15.08■□□□□ 0
CDRT1-206ENST00000571263 IBTKQ9P2D0 1353 aaPredicted RBP15.08■□□□□ 0
CDRT1-206ENST00000571263 LY75O60449 1722 aa15.07■□□□□ 0
CDRT1-206ENST00000571263 TJP1Q07157 1748 aa15.07■□□□□ 0
CDRT1-206ENST00000571263 RGL2O15211 777 aa15.07■□□□□ 0
CDRT1-206ENST00000571263 APBA3O96018 575 aa15.07■□□□□ 0
CDRT1-206ENST00000571263 AIMP1Q12904 312 aaKnown RBP15.07■□□□□ 0
CDRT1-206ENST00000571263 ITPK1Q13572 414 aa15.07■□□□□ 0
CDRT1-206ENST00000571263 PROSER3Q2NL68 480 aa15.07■□□□□ 0
CDRT1-206ENST00000571263 KIF6Q6ZMV9 814 aa15.07■□□□□ 0
CDRT1-206ENST00000571263 PTF1AQ7RTS3 328 aa15.07■□□□□ 0
CDRT1-206ENST00000571263 TMEM57Q8N5G2 664 aa15.07■□□□□ 0
CDRT1-206ENST00000571263 PPP4R2Q9NY27 417 aa15.07■□□□□ 0
CDRT1-206ENST00000571263 ALDH1L1O75891 902 aa15.06■□□□□ 0
CDRT1-206ENST00000571263 ANXA1P04083 346 aa15.06■□□□□ 0
CDRT1-206ENST00000571263 RLBP1P12271 317 aa15.06■□□□□ 0
CDRT1-206ENST00000571263 CRKLP46109 303 aaKnown RBP15.06■□□□□ 0
CDRT1-206ENST00000571263 SF3B2Q13435 895 aaKnown RBP15.06■□□□□ 0
CDRT1-206ENST00000571263 INTS5Q6P9B9 1019 aaKnown RBP15.06■□□□□ 0
CDRT1-206ENST00000571263 EXOC6Q8TAG9 804 aa15.06■□□□□ 0
CDRT1-206ENST00000571263 SRCIN1Q9C0H9 1055 aa15.06■□□□□ 0
CDRT1-206ENST00000571263 MAP3K2Q9Y2U5 619 aa15.06■□□□□ 0
CDRT1-206ENST00000571263 ATP10DQ9P241 1426 aa15.06■□□□□ 0
CDRT1-206ENST00000571263 ERVV-1B6SEH8 477 aa15.05■□□□□ -0
CDRT1-206ENST00000571263 EIF5P55010 431 aaKnown RBP15.05■□□□□ -0
CDRT1-206ENST00000571263 HSP90AB3PQ58FF7 597 aa15.05■□□□□ -0
CDRT1-206ENST00000571263 SLC4A10Q6U841 1118 aa15.05■□□□□ -0
CDRT1-206ENST00000571263 LINS1Q8NG48 757 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms