RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 PIGBQ92521 554 aa21.87■■□□□ 1.09
RPAIN-208ENST00000571043 ACSBG1Q96GR2 724 aa21.87■■□□□ 1.09
RPAIN-208ENST00000571043 RGS3P49796 1198 aa21.85■■□□□ 1.09
RPAIN-208ENST00000571043 INTS3Q68E01 1043 aaKnown RBP21.85■■□□□ 1.09
RPAIN-208ENST00000571043 KCNQ2O43526 872 aa21.85■■□□□ 1.09
RPAIN-208ENST00000571043 SYTL4Q96C24 671 aaPredicted RBP21.85■■□□□ 1.09
RPAIN-208ENST00000571043 SLC4A2P04920 1241 aa21.84■■□□□ 1.09
RPAIN-208ENST00000571043 FAM161AQ3B820 660 aa21.84■■□□□ 1.09
RPAIN-208ENST00000571043 PDZRN3Q9UPQ7 1066 aa21.84■■□□□ 1.09
RPAIN-208ENST00000571043 KDM3BQ7LBC6 1761 aa21.84■■□□□ 1.09
RPAIN-208ENST00000571043 CCDC30Q5VVM6 783 aa21.83■■□□□ 1.09
RPAIN-208ENST00000571043 ZNF790Q6PG37 636 aa21.83■■□□□ 1.09
RPAIN-208ENST00000571043 SMC5Q8IY18 1101 aa21.83■■□□□ 1.09
RPAIN-208ENST00000571043 SLC39A6Q13433 755 aa21.82■■□□□ 1.08
RPAIN-208ENST00000571043 STK31Q9BXU1 1019 aa21.82■■□□□ 1.08
RPAIN-208ENST00000571043 KCNQ3O43525 872 aa21.81■■□□□ 1.08
RPAIN-208ENST00000571043 CHMP4AQ9BY43 222 aa21.81■■□□□ 1.08
RPAIN-208ENST00000571043 NHSQ6T4R5 1651 aa21.81■■□□□ 1.08
RPAIN-208ENST00000571043 HOXB7P09629 217 aa21.8■■□□□ 1.08
RPAIN-208ENST00000571043 ATG3Q9NT62 314 aa21.8■■□□□ 1.08
RPAIN-208ENST00000571043 EIF4A1P60842 406 aaKnown RBP21.8■■□□□ 1.08
RPAIN-208ENST00000571043 PTF1AQ7RTS3 328 aa21.8■■□□□ 1.08
RPAIN-208ENST00000571043 BCL11BQ9C0K0 894 aaPredicted RBP21.8■■□□□ 1.08
RPAIN-208ENST00000571043 ASAP1Q9ULH1 1129 aa21.8■■□□□ 1.08
RPAIN-208ENST00000571043 ANP32AP39687 249 aaKnown RBP21.79■■□□□ 1.08
RPAIN-208ENST00000571043 C8orf34Q49A92 452 aa21.78■■□□□ 1.08
RPAIN-208ENST00000571043 TTC5Q8N0Z6 440 aa21.78■■□□□ 1.08
RPAIN-208ENST00000571043 PAPPAQ13219 1627 aa21.78■■□□□ 1.08
RPAIN-208ENST00000571043 BTAF1O14981 1849 aa21.77■■□□□ 1.08
RPAIN-208ENST00000571043 HEG1Q9ULI3 1381 aa21.77■■□□□ 1.08
RPAIN-208ENST00000571043 UBR2Q8IWV8 1755 aa21.76■■□□□ 1.07
RPAIN-208ENST00000571043 TRIM37O94972 964 aa21.75■■□□□ 1.07
RPAIN-208ENST00000571043 CCT4P50991 539 aaKnown RBP21.75■■□□□ 1.07
RPAIN-208ENST00000571043 ZNF496Q96IT1 587 aaPredicted RBP21.75■■□□□ 1.07
RPAIN-208ENST00000571043 G2E3Q7L622 706 aa21.75■■□□□ 1.07
RPAIN-208ENST00000571043 SMARCC1Q92922 1105 aaPredicted RBP21.75■■□□□ 1.07
RPAIN-208ENST00000571043 GCC1Q96CN9 775 aa21.75■■□□□ 1.07
RPAIN-208ENST00000571043 FMNL2Q96PY5 1086 aa21.74■■□□□ 1.07
RPAIN-208ENST00000571043 GIGYF1O75420 1035 aaPredicted RBP21.73■■□□□ 1.07
RPAIN-208ENST00000571043 FLIIQ13045 1269 aa21.73■■□□□ 1.07
RPAIN-208ENST00000571043 HDGFL1Q5TGJ6 251 aa21.73■■□□□ 1.07
RPAIN-208ENST00000571043 KCPQ6ZWJ8 1503 aa21.73■■□□□ 1.07
RPAIN-208ENST00000571043 PTCD1O75127 700 aaKnown RBP21.72■■□□□ 1.07
RPAIN-208ENST00000571043 NUCB1Q02818 461 aa21.72■■□□□ 1.07
RPAIN-208ENST00000571043 C1orf115Q9H7X2 142 aa21.71■■□□□ 1.07
RPAIN-208ENST00000571043 SIRT2Q8IXJ6 389 aa21.7■■□□□ 1.07
RPAIN-208ENST00000571043 VSIG10Q8N0Z9 540 aa21.7■■□□□ 1.07
RPAIN-208ENST00000571043 SNRPA1P09661 255 aaKnown RBP21.7■■□□□ 1.06
RPAIN-208ENST00000571043 RPAP2Q8IXW5 612 aaPredicted RBP21.7■■□□□ 1.06
RPAIN-208ENST00000571043 PALLDQ8WX93 1383 aa21.69■■□□□ 1.06
RPAIN-208ENST00000571043 MSH5O43196 834 aa21.69■■□□□ 1.06
RPAIN-208ENST00000571043 IPO9Q96P70 1041 aaKnown RBP21.69■■□□□ 1.06
RPAIN-208ENST00000571043 SLC4A9Q96Q91 983 aa21.69■■□□□ 1.06
RPAIN-208ENST00000571043 RBM42Q9BTD8 480 aaKnown RBP21.69■■□□□ 1.06
RPAIN-208ENST00000571043 FKBP5Q13451 457 aaPredicted RBP21.68■■□□□ 1.06
RPAIN-208ENST00000571043 ANKRD44Q8N8A2 993 aa21.68■■□□□ 1.06
RPAIN-208ENST00000571043 LOC102724428A0A0B4J2F2 783 aa21.67■■□□□ 1.06
RPAIN-208ENST00000571043 PRAMEF22A3QJZ6 481 aa21.67■■□□□ 1.06
RPAIN-208ENST00000571043 SIK1P57059 783 aa21.67■■□□□ 1.06
RPAIN-208ENST00000571043 CHD1LQ86WJ1 897 aa21.67■■□□□ 1.06
RPAIN-208ENST00000571043 CACNA1FO60840 1977 aa21.67■■□□□ 1.06
RPAIN-208ENST00000571043 F6X3S4 739 aa21.66■■□□□ 1.06
RPAIN-208ENST00000571043 PLSCR1O15162 318 aa21.66■■□□□ 1.06
RPAIN-208ENST00000571043 NECTIN2Q92692 538 aa21.66■■□□□ 1.06
RPAIN-208ENST00000571043 TEX13AQ9BXU3 409 aaPredicted RBP21.66■■□□□ 1.06
RPAIN-208ENST00000571043 LY75O60449 1722 aa21.66■■□□□ 1.06
RPAIN-208ENST00000571043 PXDNLA1KZ92 1463 aa21.66■■□□□ 1.06
RPAIN-208ENST00000571043 ZNF831Q5JPB2 1677 aa21.66■■□□□ 1.06
RPAIN-208ENST00000571043 SLC4A10Q6U841 1118 aa21.65■■□□□ 1.06
RPAIN-208ENST00000571043 MEIS3Q99687 375 aa21.65■■□□□ 1.06
RPAIN-208ENST00000571043 USP16Q9Y5T5 823 aa21.65■■□□□ 1.06
RPAIN-208ENST00000571043 ATP10DQ9P241 1426 aa21.65■■□□□ 1.06
RPAIN-208ENST00000571043 APBA3O96018 575 aa21.65■■□□□ 1.06
RPAIN-208ENST00000571043 CEP85Q6P2H3 762 aa21.65■■□□□ 1.06
RPAIN-208ENST00000571043 C5P01031 1676 aa21.64■■□□□ 1.06
RPAIN-208ENST00000571043 TNS1Q9HBL0 1735 aaKnown RBP21.64■■□□□ 1.05
RPAIN-208ENST00000571043 EIF2S2P20042 333 aaKnown RBP21.64■■□□□ 1.05
RPAIN-208ENST00000571043 ATP6V1AP38606 617 aa21.64■■□□□ 1.05
RPAIN-208ENST00000571043 NPM2Q86SE8 214 aaKnown RBP21.64■■□□□ 1.05
RPAIN-208ENST00000571043 DCTPP1Q9H773 170 aa21.64■■□□□ 1.05
RPAIN-208ENST00000571043 GNAI3P08754 354 aa21.62■■□□□ 1.05
RPAIN-208ENST00000571043 ANKRD45Q5TZF3 282 aa21.62■■□□□ 1.05
RPAIN-208ENST00000571043 DNAJC10Q8IXB1 793 aa21.62■■□□□ 1.05
RPAIN-208ENST00000571043 DBF4Q9UBU7 674 aaPredicted RBP21.62■■□□□ 1.05
RPAIN-208ENST00000571043 CICQ96RK0 1608 aaPredicted RBP21.61■■□□□ 1.05
RPAIN-208ENST00000571043 CCDC125Q86Z20 511 aa21.61■■□□□ 1.05
RPAIN-208ENST00000571043 LNPKQ9C0E8 428 aa21.61■■□□□ 1.05
RPAIN-208ENST00000571043 CHPF2Q9P2E5 772 aa21.61■■□□□ 1.05
RPAIN-208ENST00000571043 TJP1Q07157 1748 aa21.6■■□□□ 1.05
RPAIN-208ENST00000571043 ITPK1Q13572 414 aa21.6■■□□□ 1.05
RPAIN-208ENST00000571043 PHAXQ9H814 394 aaKnown RBP21.6■■□□□ 1.05
RPAIN-208ENST00000571043 LAMB4A4D0S4 1761 aa21.6■■□□□ 1.05
RPAIN-208ENST00000571043 HMMRO75330 724 aa21.6■■□□□ 1.05
RPAIN-208ENST00000571043 STARD3NLO95772 234 aa21.6■■□□□ 1.05
RPAIN-208ENST00000571043 GNAI2P04899 355 aa21.6■■□□□ 1.05
RPAIN-208ENST00000571043 CYP19A1P11511 503 aaPredicted RBP21.6■■□□□ 1.05
RPAIN-208ENST00000571043 SLC27A3Q5K4L6 730 aa21.6■■□□□ 1.05
RPAIN-208ENST00000571043 PROM2Q8N271 834 aa21.6■■□□□ 1.05
RPAIN-208ENST00000571043 CCNL1Q9UK58 526 aaPredicted RBP21.6■■□□□ 1.05
RPAIN-208ENST00000571043 DDRGK1Q96HY6 314 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms