RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 PSME1Q06323 249 aa18.39■□□□□ 0.53
USP43-202ENST00000570475 PRDM10Q9NQV6 1147 aa18.39■□□□□ 0.53
USP43-202ENST00000570475 TFIP11Q9UBB9 837 aaKnown RBP18.39■□□□□ 0.53
USP43-202ENST00000570475 BRD1O95696 1058 aa18.39■□□□□ 0.53
USP43-202ENST00000570475 LRRC59Q96AG4 307 aaKnown RBP18.39■□□□□ 0.53
USP43-202ENST00000570475 KIF1BPQ96EK5 621 aa18.39■□□□□ 0.53
USP43-202ENST00000570475 GPATCH3Q96I76 525 aa18.39■□□□□ 0.53
USP43-202ENST00000570475 BOLA2Q9H3K6 86 aa18.39■□□□□ 0.53
USP43-202ENST00000570475 PDRG1Q9NUG6 133 aa18.39■□□□□ 0.53
USP43-202ENST00000570475 ROBO2Q9HCK4 1378 aa18.39■□□□□ 0.53
USP43-202ENST00000570475 MYL6BP14649 208 aa18.39■□□□□ 0.53
USP43-202ENST00000570475 DNM1Q05193 864 aaKnown RBP18.39■□□□□ 0.53
USP43-202ENST00000570475 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.39■□□□□ 0.53
USP43-202ENST00000570475 STX6O43752 255 aa18.38■□□□□ 0.53
USP43-202ENST00000570475 RASEFQ8IZ41 740 aa18.38■□□□□ 0.53
USP43-202ENST00000570475 FSD1Q9BTV5 496 aa18.38■□□□□ 0.53
USP43-202ENST00000570475 CPS1P31327 1500 aa18.38■□□□□ 0.53
USP43-202ENST00000570475 ATP10DQ9P241 1426 aa18.38■□□□□ 0.53
USP43-202ENST00000570475 BTBD11A6QL63 1104 aa18.38■□□□□ 0.53
USP43-202ENST00000570475 ADCY5O95622 1261 aa18.38■□□□□ 0.53
USP43-202ENST00000570475 NOL7Q9UMY1 257 aaKnown RBP18.38■□□□□ 0.53
USP43-202ENST00000570475 G3BP1Q13283 466 aaKnown RBP eCLIP18.37■□□□□ 0.53
USP43-202ENST00000570475 CWF19L2Q2TBE0 894 aaKnown RBP18.37■□□□□ 0.53
USP43-202ENST00000570475 C1orf141Q5JVX7 400 aa18.37■□□□□ 0.53
USP43-202ENST00000570475 RUFY2Q8WXA3 655 aa18.37■□□□□ 0.53
USP43-202ENST00000570475 DNAAF4Q8WXU2 420 aa18.37■□□□□ 0.53
USP43-202ENST00000570475 GJB2P29033 226 aa18.37■□□□□ 0.53
USP43-202ENST00000570475 PIP4K2AP48426 406 aaPredicted RBP18.37■□□□□ 0.53
USP43-202ENST00000570475 CSPP1Q1MSJ5 1256 aa18.37■□□□□ 0.53
USP43-202ENST00000570475 ZNF330Q9Y3S2 320 aaPredicted RBP18.37■□□□□ 0.53
USP43-202ENST00000570475 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
USP43-202ENST00000570475 CYP2E1P05181 493 aaPredicted RBP18.37■□□□□ 0.53
USP43-202ENST00000570475 CKAP2LQ8IYA6 745 aa18.37■□□□□ 0.53
USP43-202ENST00000570475 LIMCH1Q9UPQ0 1083 aa18.37■□□□□ 0.53
USP43-202ENST00000570475 SYT1P21579 422 aa18.36■□□□□ 0.53
USP43-202ENST00000570475 ESCO1Q5FWF5 840 aa18.36■□□□□ 0.53
USP43-202ENST00000570475 LARP1BQ659C4 914 aaKnown RBP18.36■□□□□ 0.53
USP43-202ENST00000570475 PKNOX2Q96KN3 472 aa18.36■□□□□ 0.53
USP43-202ENST00000570475 ATP6V1DQ9Y5K8 247 aa18.36■□□□□ 0.53
USP43-202ENST00000570475 CYP46A1Q9Y6A2 500 aa18.36■□□□□ 0.53
USP43-202ENST00000570475 MAP2P11137 1827 aaKnown RBP18.36■□□□□ 0.53
USP43-202ENST00000570475 SOS1Q07889 1333 aaPredicted RBP18.36■□□□□ 0.53
USP43-202ENST00000570475 CFAP74Q9C0B2 1584 aa18.36■□□□□ 0.53
USP43-202ENST00000570475 AATKQ6ZMQ8 1374 aa18.35■□□□□ 0.53
USP43-202ENST00000570475 ATP7BP35670 1465 aa18.35■□□□□ 0.53
USP43-202ENST00000570475 KLHDC4Q8TBB5 520 aa18.35■□□□□ 0.53
USP43-202ENST00000570475 BICD2Q8TD16 824 aa18.35■□□□□ 0.53
USP43-202ENST00000570475 SNX14Q9Y5W7 946 aa18.35■□□□□ 0.53
USP43-202ENST00000570475 IFT172Q9UG01 1749 aa18.34■□□□□ 0.53
USP43-202ENST00000570475 RIC3Q7Z5B4 369 aa18.34■□□□□ 0.53
USP43-202ENST00000570475 CDK12Q9NYV4 1490 aaPredicted RBP18.34■□□□□ 0.53
USP43-202ENST00000570475 ZSCAN22P10073 491 aaPredicted RBP18.34■□□□□ 0.53
USP43-202ENST00000570475 DDX11Q96FC9 970 aa18.34■□□□□ 0.53
USP43-202ENST00000570475 MAP3K2Q9Y2U5 619 aa18.34■□□□□ 0.53
USP43-202ENST00000570475 KIAA0232Q92628 1395 aa18.34■□□□□ 0.53
USP43-202ENST00000570475 RAB11FIP3O75154 756 aa18.33■□□□□ 0.53
USP43-202ENST00000570475 DNAJC2Q99543 621 aaKnown RBP18.33■□□□□ 0.53
USP43-202ENST00000570475 NDUFB9Q9Y6M9 179 aa18.33■□□□□ 0.53
USP43-202ENST00000570475 ARHGAP31Q2M1Z3 1444 aa18.33■□□□□ 0.52
USP43-202ENST00000570475 CHAF1AQ13111 956 aaPredicted RBP18.33■□□□□ 0.52
USP43-202ENST00000570475 CCDC183Q5T5S1 534 aa18.33■□□□□ 0.52
USP43-202ENST00000570475 PDCL3Q9H2J4 239 aa18.33■□□□□ 0.52
USP43-202ENST00000570475 SIGLEC1Q9BZZ2 1709 aa18.33■□□□□ 0.52
USP43-202ENST00000570475 FLT4P35916 1363 aa18.33■□□□□ 0.52
USP43-202ENST00000570475 HOXC9P31274 260 aa18.32■□□□□ 0.52
USP43-202ENST00000570475 ZNF592Q92610 1267 aa18.32■□□□□ 0.52
USP43-202ENST00000570475 NEO1Q92859 1461 aa18.32■□□□□ 0.52
USP43-202ENST00000570475 PTH1RQ03431 593 aa18.32■□□□□ 0.52
USP43-202ENST00000570475 NEURL4Q96JN8 1562 aa18.32■□□□□ 0.52
USP43-202ENST00000570475 H3BQV1 296 aa18.31■□□□□ 0.52
USP43-202ENST00000570475 GLRX3O76003 335 aaKnown RBP18.31■□□□□ 0.52
USP43-202ENST00000570475 LARGE1O95461 756 aa18.31■□□□□ 0.52
USP43-202ENST00000570475 HSP90AB4PQ58FF6 505 aa18.31■□□□□ 0.52
USP43-202ENST00000570475 IFFO2Q5TF58 517 aa18.31■□□□□ 0.52
USP43-202ENST00000570475 OSBPL3Q9H4L5 887 aa18.31■□□□□ 0.52
USP43-202ENST00000570475 CSB-PGBD3P0DP91 1061 aa18.31■□□□□ 0.52
USP43-202ENST00000570475 ANAPC15P60006 121 aa18.31■□□□□ 0.52
USP43-202ENST00000570475 ADCK5Q3MIX3 580 aa18.31■□□□□ 0.52
USP43-202ENST00000570475 CPSF1Q10570 1443 aaKnown RBP18.31■□□□□ 0.52
USP43-202ENST00000570475 A2ML1A8K2U0 1454 aa18.31■□□□□ 0.52
USP43-202ENST00000570475 LRRC2Q9BYS8 371 aa18.31■□□□□ 0.52
USP43-202ENST00000570475 KIF24Q5T7B8 1368 aa18.3■□□□□ 0.52
USP43-202ENST00000570475 SGSM2O43147 1006 aa18.3■□□□□ 0.52
USP43-202ENST00000570475 CLEC17AQ6ZS10 378 aa18.3■□□□□ 0.52
USP43-202ENST00000570475 FAM227BQ96M60 508 aa18.3■□□□□ 0.52
USP43-202ENST00000570475 TNRQ92752 1358 aa18.3■□□□□ 0.52
USP43-202ENST00000570475 HSPA4P34932 840 aa18.3■□□□□ 0.52
USP43-202ENST00000570475 KDM4AO75164 1064 aa18.29■□□□□ 0.52
USP43-202ENST00000570475 RUFY3Q7L099 469 aa18.29■□□□□ 0.52
USP43-202ENST00000570475 EDC3Q96F86 508 aaKnown RBP18.29■□□□□ 0.52
USP43-202ENST00000570475 IBTKQ9P2D0 1353 aaPredicted RBP18.29■□□□□ 0.52
USP43-202ENST00000570475 DIP2CQ9Y2E4 1556 aa18.29■□□□□ 0.52
USP43-202ENST00000570475 F13A1P00488 732 aa18.29■□□□□ 0.52
USP43-202ENST00000570475 SLC39A6Q13433 755 aa18.29■□□□□ 0.52
USP43-202ENST00000570475 INTS4Q96HW7 963 aaKnown RBP18.29■□□□□ 0.52
USP43-202ENST00000570475 USP32Q8NFA0 1604 aa18.29■□□□□ 0.52
USP43-202ENST00000570475 PRAMEF22A3QJZ6 481 aa18.29■□□□□ 0.52
USP43-202ENST00000570475 ECHDC1Q9NTX5 307 aa18.29■□□□□ 0.52
USP43-202ENST00000570475 PLEKHG3A1L390 1219 aa18.28■□□□□ 0.52
USP43-202ENST00000570475 NEUROD6Q96NK8 337 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms