RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 IBTKQ9P2D0 1353 aaPredicted RBP13.96□□□□□ -0.18
NPLOC4-203ENST00000570300 KCPQ6ZWJ8 1503 aa13.95□□□□□ -0.18
NPLOC4-203ENST00000570300 THSD7AQ9UPZ6 1657 aa13.95□□□□□ -0.18
NPLOC4-203ENST00000570300 ITGB4P16144 1822 aa13.95□□□□□ -0.18
NPLOC4-203ENST00000570300 ONECUT3O60422 494 aaPredicted RBP13.95□□□□□ -0.18
NPLOC4-203ENST00000570300 VSIG10Q8N0Z9 540 aa13.95□□□□□ -0.18
NPLOC4-203ENST00000570300 LAMB4A4D0S4 1761 aa13.95□□□□□ -0.18
NPLOC4-203ENST00000570300 ATRNO75882 1429 aa13.95□□□□□ -0.18
NPLOC4-203ENST00000570300 TCERG1O14776 1098 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-203ENST00000570300 ZBTB7BO15156 539 aaPredicted RBP13.94□□□□□ -0.18
NPLOC4-203ENST00000570300 CCT4P50991 539 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-203ENST00000570300 SLC39A6Q13433 755 aa13.94□□□□□ -0.18
NPLOC4-203ENST00000570300 CENPQQ7L2Z9 268 aaPredicted RBP13.94□□□□□ -0.18
NPLOC4-203ENST00000570300 G2E3Q7L622 706 aa13.94□□□□□ -0.18
NPLOC4-203ENST00000570300 ITPRIPQ8IWB1 547 aa13.94□□□□□ -0.18
NPLOC4-203ENST00000570300 DDX21Q9NR30 783 aaKnown RBP eCLIP13.94□□□□□ -0.18
NPLOC4-203ENST00000570300 HYPKQ9NX55 129 aa13.94□□□□□ -0.18
NPLOC4-203ENST00000570300 TMOD3Q9NYL9 352 aa13.94□□□□□ -0.18
NPLOC4-203ENST00000570300 C5P01031 1676 aa13.94□□□□□ -0.18
NPLOC4-203ENST00000570300 PDIA6Q15084 440 aa13.93□□□□□ -0.18
NPLOC4-203ENST00000570300 PIGBQ92521 554 aa13.93□□□□□ -0.18
NPLOC4-203ENST00000570300 MARCH10Q8NA82 808 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-203ENST00000570300 FOXD4L1Q9NU39 408 aa13.92□□□□□ -0.18
NPLOC4-203ENST00000570300 CHPF2Q9P2E5 772 aa13.92□□□□□ -0.18
NPLOC4-203ENST00000570300 AFF2P51816 1311 aa13.91□□□□□ -0.18
NPLOC4-203ENST00000570300 EIF2S2P20042 333 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-203ENST00000570300 HDAC1Q13547 482 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-203ENST00000570300 MEX3CQ5U5Q3 659 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-203ENST00000570300 GJD4Q96KN9 370 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-203ENST00000570300 TEX13AQ9BXU3 409 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-203ENST00000570300 TRPC5Q9UL62 973 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-203ENST00000570300 CCDC9Q9Y3X0 531 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-203ENST00000570300 PCDHB15Q9Y5E8 787 aa13.91□□□□□ -0.18
NPLOC4-203ENST00000570300 ATP10DQ9P241 1426 aa13.9□□□□□ -0.18
NPLOC4-203ENST00000570300 CICQ96RK0 1608 aaPredicted RBP13.9□□□□□ -0.18
NPLOC4-203ENST00000570300 FKBP5Q13451 457 aaPredicted RBP13.9□□□□□ -0.18
NPLOC4-203ENST00000570300 LRP10Q7Z4F1 713 aa13.9□□□□□ -0.18
NPLOC4-203ENST00000570300 DOT1LQ8TEK3 1739 aa13.9□□□□□ -0.18
NPLOC4-203ENST00000570300 ZBTB22O15209 634 aa13.89□□□□□ -0.19
NPLOC4-203ENST00000570300 FAM98CQ17RN3 349 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-203ENST00000570300 RWDD1Q9H446 243 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-203ENST00000570300 PHAXQ9H814 394 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-203ENST00000570300 ATG3Q9NT62 314 aa13.89□□□□□ -0.19
NPLOC4-203ENST00000570300 PRAMEF22A3QJZ6 481 aa13.88□□□□□ -0.19
NPLOC4-203ENST00000570300 NECTIN2Q92692 538 aa13.88□□□□□ -0.19
NPLOC4-203ENST00000570300 USP16Q9Y5T5 823 aa13.88□□□□□ -0.19
NPLOC4-203ENST00000570300 ZNF831Q5JPB2 1677 aa13.88□□□□□ -0.19
NPLOC4-203ENST00000570300 DDX58O95786 925 aaKnown RBP13.87□□□□□ -0.19
NPLOC4-203ENST00000570300 KSR2Q6VAB6 950 aa13.87□□□□□ -0.19
NPLOC4-203ENST00000570300 ADCY9O60503 1353 aa13.86□□□□□ -0.19
NPLOC4-203ENST00000570300 PRIM1P49642 420 aaKnown RBP13.86□□□□□ -0.19
NPLOC4-203ENST00000570300 PROSER3Q2NL68 480 aa13.86□□□□□ -0.19
NPLOC4-203ENST00000570300 DNAAF4Q8WXU2 420 aa13.86□□□□□ -0.19
NPLOC4-203ENST00000570300 ASAP1Q9ULH1 1129 aa13.86□□□□□ -0.19
NPLOC4-203ENST00000570300 PI4KAP2A4QPH2 592 aa13.85□□□□□ -0.19
NPLOC4-203ENST00000570300 F6X3S4 739 aa13.85□□□□□ -0.19
NPLOC4-203ENST00000570300 ALDH1L1O75891 902 aa13.85□□□□□ -0.19
NPLOC4-203ENST00000570300 IGHDP01880 384 aa13.85□□□□□ -0.19
NPLOC4-203ENST00000570300 BEND3Q5T5X7 828 aa13.85□□□□□ -0.19
NPLOC4-203ENST00000570300 RPAP2Q8IXW5 612 aaPredicted RBP13.85□□□□□ -0.19
NPLOC4-203ENST00000570300 PI4KAP1Q8N8J0 262 aa13.85□□□□□ -0.19
NPLOC4-203ENST00000570300 STARD3NLO95772 234 aa13.84□□□□□ -0.19
NPLOC4-203ENST00000570300 GNAI3P08754 354 aa13.84□□□□□ -0.19
NPLOC4-203ENST00000570300 SMARCC1Q92922 1105 aaPredicted RBP13.84□□□□□ -0.19
NPLOC4-203ENST00000570300 SRCIN1Q9C0H9 1055 aa13.84□□□□□ -0.19
NPLOC4-203ENST00000570300 NBPF26B4DH59 902 aa13.83□□□□□ -0.2
NPLOC4-203ENST00000570300 PTCD1O75127 700 aaKnown RBP13.83□□□□□ -0.2
NPLOC4-203ENST00000570300 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
NPLOC4-203ENST00000570300 NBPF14Q5TI25 921 aa13.83□□□□□ -0.2
NPLOC4-203ENST00000570300 NBPF10Q6P3W6 841 aaKnown RBP13.83□□□□□ -0.2
NPLOC4-203ENST00000570300 SMC5Q8IY18 1101 aa13.83□□□□□ -0.2
NPLOC4-203ENST00000570300 NBPF15Q8N660 670 aa13.83□□□□□ -0.2
NPLOC4-203ENST00000570300 QTRT2Q9H974 415 aaKnown RBP13.83□□□□□ -0.2
NPLOC4-203ENST00000570300 NHSQ6T4R5 1651 aa13.82□□□□□ -0.2
NPLOC4-203ENST00000570300 ANXA1P04083 346 aa13.82□□□□□ -0.2
NPLOC4-203ENST00000570300 ZNF772Q68DY9 489 aaPredicted RBP13.82□□□□□ -0.2
NPLOC4-203ENST00000570300 SLC4A10Q6U841 1118 aa13.82□□□□□ -0.2
NPLOC4-203ENST00000570300 ANKRD44Q8N8A2 993 aa13.82□□□□□ -0.2
NPLOC4-203ENST00000570300 LINS1Q8NG48 757 aa13.82□□□□□ -0.2
NPLOC4-203ENST00000570300 MEIS3Q99687 375 aa13.82□□□□□ -0.2
NPLOC4-203ENST00000570300 USP44Q9H0E7 712 aa13.82□□□□□ -0.2
NPLOC4-203ENST00000570300 HDAC5Q9UQL6 1122 aa13.82□□□□□ -0.2
NPLOC4-203ENST00000570300 KAT6BQ8WYB5 2073 aa13.82□□□□□ -0.2
NPLOC4-203ENST00000570300 TJP1Q07157 1748 aa13.81□□□□□ -0.2
NPLOC4-203ENST00000570300 GNAI2P04899 355 aa13.81□□□□□ -0.2
NPLOC4-203ENST00000570300 CYP19A1P11511 503 aaPredicted RBP13.81□□□□□ -0.2
NPLOC4-203ENST00000570300 ANKRD13DQ6ZTN6 518 aa13.81□□□□□ -0.2
NPLOC4-203ENST00000570300 COPS6Q7L5N1 327 aa13.81□□□□□ -0.2
NPLOC4-203ENST00000570300 PLBD2Q8NHP8 589 aa13.81□□□□□ -0.2
NPLOC4-203ENST00000570300 XAGE3Q8WTP9 111 aa13.81□□□□□ -0.2
NPLOC4-203ENST00000570300 SLC4A9Q96Q91 983 aa13.81□□□□□ -0.2
NPLOC4-203ENST00000570300 RGS17Q9UGC6 210 aaPredicted RBP13.81□□□□□ -0.2
NPLOC4-203ENST00000570300 MAP3K2Q9Y2U5 619 aa13.81□□□□□ -0.2
NPLOC4-203ENST00000570300 UTYO14607 1347 aa13.81□□□□□ -0.2
NPLOC4-203ENST00000570300 RREB1Q92766 1687 aa13.81□□□□□ -0.2
NPLOC4-203ENST00000570300 DNAJC10Q8IXB1 793 aa13.8□□□□□ -0.2
NPLOC4-203ENST00000570300 SIRT2Q8IXJ6 389 aa13.8□□□□□ -0.2
NPLOC4-203ENST00000570300 SEPT12Q8IYM1 358 aa13.8□□□□□ -0.2
NPLOC4-203ENST00000570300 GCC1Q96CN9 775 aa13.8□□□□□ -0.2
NPLOC4-203ENST00000570300 METTL22Q9BUU2 404 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms