RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 CBX1P83916 185 aa17.27■□□□□ 0.35
GCOM1-213ENST00000569945 ATRNO75882 1429 aa17.27■□□□□ 0.35
GCOM1-213ENST00000569945 GOLGA6L22H0YM25 854 aa17.26■□□□□ 0.35
GCOM1-213ENST00000569945 BAG4O95429 457 aaKnown RBP17.26■□□□□ 0.35
GCOM1-213ENST00000569945 IL2RBP14784 551 aa17.26■□□□□ 0.35
GCOM1-213ENST00000569945 TATP17735 454 aaPredicted RBP17.26■□□□□ 0.35
GCOM1-213ENST00000569945 TMPOP42166 694 aaKnown RBP17.26■□□□□ 0.35
GCOM1-213ENST00000569945 ATP2B3Q16720 1220 aa17.26■□□□□ 0.35
GCOM1-213ENST00000569945 ZSCAN23Q3MJ62 389 aa17.26■□□□□ 0.35
GCOM1-213ENST00000569945 GLI3P10071 1580 aa17.26■□□□□ 0.35
GCOM1-213ENST00000569945 GTF2F1P35269 517 aaKnown RBP eCLIP17.26■□□□□ 0.35
GCOM1-213ENST00000569945 NGEFQ8N5V2 710 aa17.26■□□□□ 0.35
GCOM1-213ENST00000569945 GJD4Q96KN9 370 aaPredicted RBP17.26■□□□□ 0.35
GCOM1-213ENST00000569945 TNNQ9UQP3 1299 aa17.26■□□□□ 0.35
GCOM1-213ENST00000569945 KIF2CQ99661 725 aa17.25■□□□□ 0.35
GCOM1-213ENST00000569945 TRPC5Q9UL62 973 aaPredicted RBP17.25■□□□□ 0.35
GCOM1-213ENST00000569945 DISP2A7MBM2 1401 aa17.25■□□□□ 0.35
GCOM1-213ENST00000569945 CCDC39Q9UFE4 941 aa17.25■□□□□ 0.35
GCOM1-213ENST00000569945 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
GCOM1-213ENST00000569945 JARID2Q92833 1246 aaPredicted RBP17.24■□□□□ 0.35
GCOM1-213ENST00000569945 OVOS2A0A0G2JMS6 1433 aa17.24■□□□□ 0.35
GCOM1-213ENST00000569945 CD2BP2O95400 341 aaKnown RBP17.24■□□□□ 0.35
GCOM1-213ENST00000569945 DCTN1Q14203 1278 aa17.24■□□□□ 0.35
GCOM1-213ENST00000569945 NFE2L2Q16236 605 aa17.24■□□□□ 0.35
GCOM1-213ENST00000569945 TAF7LQ5H9L4 462 aa17.24■□□□□ 0.35
GCOM1-213ENST00000569945 PRIM1P49642 420 aaKnown RBP17.23■□□□□ 0.35
GCOM1-213ENST00000569945 TAF3Q5VWG9 929 aa17.23■□□□□ 0.35
GCOM1-213ENST00000569945 THUMPD2Q9BTF0 503 aaKnown RBP17.23■□□□□ 0.35
GCOM1-213ENST00000569945 TRIM35Q9UPQ4 493 aa17.23■□□□□ 0.35
GCOM1-213ENST00000569945 POTEAQ6S8J7 498 aa17.22■□□□□ 0.35
GCOM1-213ENST00000569945 DLG5Q8TDM6 1919 aa17.22■□□□□ 0.35
GCOM1-213ENST00000569945 CYP27B1O15528 508 aa17.22■□□□□ 0.35
GCOM1-213ENST00000569945 PLEKHO1Q53GL0 409 aaPredicted RBP17.22■□□□□ 0.35
GCOM1-213ENST00000569945 ZNF530Q6P9A1 599 aaPredicted RBP17.22■□□□□ 0.35
GCOM1-213ENST00000569945 BARGINQ6ZT62 677 aa17.21■□□□□ 0.35
GCOM1-213ENST00000569945 DDX54Q8TDD1 881 aaKnown RBP17.21■□□□□ 0.35
GCOM1-213ENST00000569945 PRIMPOLQ96LW4 560 aa17.21■□□□□ 0.35
GCOM1-213ENST00000569945 THRAP3Q9Y2W1 955 aaKnown RBP17.21■□□□□ 0.35
GCOM1-213ENST00000569945 WNK3Q9BYP7 1800 aa17.21■□□□□ 0.35
GCOM1-213ENST00000569945 ZNF772Q68DY9 489 aaPredicted RBP17.21■□□□□ 0.35
GCOM1-213ENST00000569945 CAVIN1Q6NZI2 390 aaKnown RBP17.21■□□□□ 0.35
GCOM1-213ENST00000569945 ZCRB1Q8TBF4 217 aaKnown RBP17.21■□□□□ 0.35
GCOM1-213ENST00000569945 ZNF830Q96NB3 372 aaPredicted RBP17.21■□□□□ 0.35
GCOM1-213ENST00000569945 K7ELQ4 463 aaPredicted RBP17.2■□□□□ 0.34
GCOM1-213ENST00000569945 MCM10Q7L590 875 aa17.2■□□□□ 0.34
GCOM1-213ENST00000569945 TSC1Q92574 1164 aa17.2■□□□□ 0.34
GCOM1-213ENST00000569945 LMBRD1Q9NUN5 540 aa17.2■□□□□ 0.34
GCOM1-213ENST00000569945 SHANK3Q9BYB0 1731 aa17.2■□□□□ 0.34
GCOM1-213ENST00000569945 PARP4Q9UKK3 1724 aaKnown RBP17.2■□□□□ 0.34
GCOM1-213ENST00000569945 A0A0G2JS52 829 aa17.2■□□□□ 0.34
GCOM1-213ENST00000569945 HMGN5P82970 282 aaKnown RBP17.2■□□□□ 0.34
GCOM1-213ENST00000569945 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
GCOM1-213ENST00000569945 WWC1Q8IX03 1113 aa17.19■□□□□ 0.34
GCOM1-213ENST00000569945 GAS2L2Q8NHY3 880 aa17.19■□□□□ 0.34
GCOM1-213ENST00000569945 LGR6Q9HBX8 967 aa17.19■□□□□ 0.34
GCOM1-213ENST00000569945 AMOTQ4VCS5 1084 aa17.19■□□□□ 0.34
GCOM1-213ENST00000569945 MPRIPQ6WCQ1 1025 aa17.19■□□□□ 0.34
GCOM1-213ENST00000569945 FOXD4L1Q9NU39 408 aa17.19■□□□□ 0.34
GCOM1-213ENST00000569945 SPG7Q9UQ90 795 aa17.19■□□□□ 0.34
GCOM1-213ENST00000569945 PKD1L3Q7Z443 1732 aa17.19■□□□□ 0.34
GCOM1-213ENST00000569945 EXOC5O00471 708 aa17.18■□□□□ 0.34
GCOM1-213ENST00000569945 PHKG2P15735 406 aa17.18■□□□□ 0.34
GCOM1-213ENST00000569945 KIAA2012Q0VF49 1180 aa17.18■□□□□ 0.34
GCOM1-213ENST00000569945 FAM182BQ5T319 152 aa17.18■□□□□ 0.34
GCOM1-213ENST00000569945 IL17REQ8NFR9 667 aa17.18■□□□□ 0.34
GCOM1-213ENST00000569945 DDB1Q16531 1140 aa17.17■□□□□ 0.34
GCOM1-213ENST00000569945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.17■□□□□ 0.34
GCOM1-213ENST00000569945 AK9Q5TCS8 1911 aa17.17■□□□□ 0.34
GCOM1-213ENST00000569945 LRRC37A3O60309 1634 aa17.17■□□□□ 0.34
GCOM1-213ENST00000569945 HDAC1Q13547 482 aaPredicted RBP17.16■□□□□ 0.34
GCOM1-213ENST00000569945 MVPQ14764 893 aaKnown RBP17.16■□□□□ 0.34
GCOM1-213ENST00000569945 SEPT12Q8IYM1 358 aa17.16■□□□□ 0.34
GCOM1-213ENST00000569945 GNAT3A8MTJ3 354 aa17.16■□□□□ 0.34
GCOM1-213ENST00000569945 CYP2E1P05181 493 aaPredicted RBP17.16■□□□□ 0.34
GCOM1-213ENST00000569945 AKAP4Q5JQC9 854 aa17.16■□□□□ 0.34
GCOM1-213ENST00000569945 MARCH10Q8NA82 808 aaPredicted RBP17.16■□□□□ 0.34
GCOM1-213ENST00000569945 MAP3K5Q99683 1374 aa17.16■□□□□ 0.34
GCOM1-213ENST00000569945 VGLL3A8MV65 326 aa17.15■□□□□ 0.34
GCOM1-213ENST00000569945 ONECUT3O60422 494 aaPredicted RBP17.15■□□□□ 0.34
GCOM1-213ENST00000569945 C1orf141Q5JVX7 400 aa17.15■□□□□ 0.34
GCOM1-213ENST00000569945 THSD7AQ9UPZ6 1657 aa17.15■□□□□ 0.34
GCOM1-213ENST00000569945 RBM6P78332 1123 aaKnown RBP17.15■□□□□ 0.34
GCOM1-213ENST00000569945 IFNL2Q8IZJ0 200 aa17.15■□□□□ 0.34
GCOM1-213ENST00000569945 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.15■□□□□ 0.34
GCOM1-213ENST00000569945 PCDH11XQ9BZA7 1347 aa17.14■□□□□ 0.34
GCOM1-213ENST00000569945 PCDH11YQ9BZA8 1340 aa17.14■□□□□ 0.34
GCOM1-213ENST00000569945 TNS2Q63HR2 1409 aa17.14■□□□□ 0.33
GCOM1-213ENST00000569945 MCTP1Q6DN14 999 aa17.14■□□□□ 0.33
GCOM1-213ENST00000569945 CDCA7Q9BWT1 371 aaPredicted RBP17.14■□□□□ 0.33
GCOM1-213ENST00000569945 KDM6AO15550 1401 aaPredicted RBP17.14■□□□□ 0.33
GCOM1-213ENST00000569945 LRSAM1Q6UWE0 723 aa17.14■□□□□ 0.33
GCOM1-213ENST00000569945 RXRBP28702 533 aa17.13■□□□□ 0.33
GCOM1-213ENST00000569945 CCDC27Q2M243 656 aa17.13■□□□□ 0.33
GCOM1-213ENST00000569945 GPT2Q8TD30 523 aa17.13■□□□□ 0.33
GCOM1-213ENST00000569945 ZBTB22O15209 634 aa17.12■□□□□ 0.33
GCOM1-213ENST00000569945 RNMTO43148 476 aaKnown RBP17.12■□□□□ 0.33
GCOM1-213ENST00000569945 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
GCOM1-213ENST00000569945 MIS18AQ9NYP9 233 aa17.12■□□□□ 0.33
GCOM1-213ENST00000569945 KIF3AQ9Y496 699 aa17.12■□□□□ 0.33
GCOM1-213ENST00000569945 EP400Q96L91 3159 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms