RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 ZBTB1Q9Y2K1 713 aa16.65■□□□□ 0.26
SCAMP2-212ENST00000569904 DPEP1P16444 411 aa16.64■□□□□ 0.25
SCAMP2-212ENST00000569904 ZNF790Q6PG37 636 aa16.64■□□□□ 0.25
SCAMP2-212ENST00000569904 HEG1Q9ULI3 1381 aa16.64■□□□□ 0.25
SCAMP2-212ENST00000569904 ZPR1O75312 459 aa16.63■□□□□ 0.25
SCAMP2-212ENST00000569904 PPP2R1AP30153 589 aa16.63■□□□□ 0.25
SCAMP2-212ENST00000569904 USPL1Q5W0Q7 1092 aa16.63■□□□□ 0.25
SCAMP2-212ENST00000569904 PHACTR3Q96KR7 559 aa16.63■□□□□ 0.25
SCAMP2-212ENST00000569904 WWC3Q9ULE0 1092 aa16.63■□□□□ 0.25
SCAMP2-212ENST00000569904 BCORQ6W2J9 1755 aa16.63■□□□□ 0.25
SCAMP2-212ENST00000569904 SBF1O95248 1867 aa16.63■□□□□ 0.25
SCAMP2-212ENST00000569904 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
SCAMP2-212ENST00000569904 TEFQ10587 303 aa16.62■□□□□ 0.25
SCAMP2-212ENST00000569904 TTC5Q8N0Z6 440 aa16.62■□□□□ 0.25
SCAMP2-212ENST00000569904 BCL2L12Q9HB09 334 aa16.62■□□□□ 0.25
SCAMP2-212ENST00000569904 BCS1LQ9Y276 419 aa16.62■□□□□ 0.25
SCAMP2-212ENST00000569904 DLG5Q8TDM6 1919 aa16.61■□□□□ 0.25
SCAMP2-212ENST00000569904 PRKAR2BP31323 418 aa16.61■□□□□ 0.25
SCAMP2-212ENST00000569904 CNGB1Q14028 1251 aaPredicted RBP16.61■□□□□ 0.25
SCAMP2-212ENST00000569904 ZNF496Q96IT1 587 aaPredicted RBP16.61■□□□□ 0.25
SCAMP2-212ENST00000569904 TEX13AQ9BXU3 409 aaPredicted RBP16.61■□□□□ 0.25
SCAMP2-212ENST00000569904 GPBP1L1Q9HC44 474 aaPredicted RBP16.61■□□□□ 0.25
SCAMP2-212ENST00000569904 NUDCQ9Y266 331 aa16.61■□□□□ 0.25
SCAMP2-212ENST00000569904 CEP350Q5VT06 3117 aa16.6■□□□□ 0.25
SCAMP2-212ENST00000569904 FCHSD2O94868 740 aa16.6■□□□□ 0.25
SCAMP2-212ENST00000569904 STARD3NLO95772 234 aa16.6■□□□□ 0.25
SCAMP2-212ENST00000569904 PIM2Q9P1W9 311 aa16.6■□□□□ 0.25
SCAMP2-212ENST00000569904 ANKRD31Q8N7Z5 1873 aa16.6■□□□□ 0.25
SCAMP2-212ENST00000569904 SENP3-EIF4A1A0A087X0R7 540 aa16.59■□□□□ 0.25
SCAMP2-212ENST00000569904 NFIXQ14938 502 aa16.59■□□□□ 0.25
SCAMP2-212ENST00000569904 FMNL2Q96PY5 1086 aa16.58■□□□□ 0.24
SCAMP2-212ENST00000569904 LAMB4A4D0S4 1761 aa16.57■□□□□ 0.24
SCAMP2-212ENST00000569904 A0A087WZG4 1122 aa16.57■□□□□ 0.24
SCAMP2-212ENST00000569904 HTATSF1O43719 755 aaKnown RBP16.57■□□□□ 0.24
SCAMP2-212ENST00000569904 IL6STP40189 918 aaPredicted RBP16.57■□□□□ 0.24
SCAMP2-212ENST00000569904 KDM3BQ7LBC6 1761 aa16.56■□□□□ 0.24
SCAMP2-212ENST00000569904 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
SCAMP2-212ENST00000569904 CANXP27824 592 aaKnown RBP16.56■□□□□ 0.24
SCAMP2-212ENST00000569904 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
SCAMP2-212ENST00000569904 DALRD3Q5D0E6 543 aaKnown RBP16.56■□□□□ 0.24
SCAMP2-212ENST00000569904 BTBD11A6QL63 1104 aa16.55■□□□□ 0.24
SCAMP2-212ENST00000569904 KIF3CO14782 793 aa16.55■□□□□ 0.24
SCAMP2-212ENST00000569904 SERPINB2P05120 415 aa16.55■□□□□ 0.24
SCAMP2-212ENST00000569904 ARHGAP27Q6ZUM4 889 aa16.55■□□□□ 0.24
SCAMP2-212ENST00000569904 COL11A2P13942 1736 aaPredicted RBP16.55■□□□□ 0.24
SCAMP2-212ENST00000569904 ARFGEF2Q9Y6D5 1785 aa16.54■□□□□ 0.24
SCAMP2-212ENST00000569904 CHRNA5P30532 468 aa16.54■□□□□ 0.24
SCAMP2-212ENST00000569904 KCNQ3O43525 872 aa16.53■□□□□ 0.24
SCAMP2-212ENST00000569904 ZNF526Q8TF50 670 aaPredicted RBP16.53■□□□□ 0.24
SCAMP2-212ENST00000569904 TNRC6CQ9HCJ0 1690 aaKnown RBP16.53■□□□□ 0.24
SCAMP2-212ENST00000569904 CCDC88AQ3V6T2 1871 aa16.52■□□□□ 0.24
SCAMP2-212ENST00000569904 CARMIL3Q8ND23 1372 aa16.52■□□□□ 0.24
SCAMP2-212ENST00000569904 RTF1Q92541 710 aaKnown RBP16.52■□□□□ 0.24
SCAMP2-212ENST00000569904 FER1L6Q2WGJ9 1857 aa16.51■□□□□ 0.23
SCAMP2-212ENST00000569904 A1BGP04217 495 aa16.51■□□□□ 0.23
SCAMP2-212ENST00000569904 TBC1D9BQ66K14 1250 aa16.51■□□□□ 0.23
SCAMP2-212ENST00000569904 MCM10Q7L590 875 aa16.51■□□□□ 0.23
SCAMP2-212ENST00000569904 PLEKHF1Q96S99 279 aa16.51■□□□□ 0.23
SCAMP2-212ENST00000569904 RGL2O15211 777 aa16.5■□□□□ 0.23
SCAMP2-212ENST00000569904 CAMTA2O94983 1202 aa16.5■□□□□ 0.23
SCAMP2-212ENST00000569904 C9orf131Q5VYM1 1079 aa16.5■□□□□ 0.23
SCAMP2-212ENST00000569904 PDZRN3Q9UPQ7 1066 aa16.5■□□□□ 0.23
SCAMP2-212ENST00000569904 USP16Q9Y5T5 823 aa16.5■□□□□ 0.23
SCAMP2-212ENST00000569904 DICER1Q9UPY3 1922 aaKnown RBP16.5■□□□□ 0.23
SCAMP2-212ENST00000569904 TIAM2Q8IVF5 1701 aa16.5■□□□□ 0.23
SCAMP2-212ENST00000569904 ZC3H4Q9UPT8 1303 aaKnown RBP16.49■□□□□ 0.23
SCAMP2-212ENST00000569904 SNRPA1P09661 255 aaKnown RBP16.49■□□□□ 0.23
SCAMP2-212ENST00000569904 HSPA6P17066 643 aa16.49■□□□□ 0.23
SCAMP2-212ENST00000569904 TBC1D2BQ9UPU7 963 aa16.49■□□□□ 0.23
SCAMP2-212ENST00000569904 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
SCAMP2-212ENST00000569904 DCTN1Q14203 1278 aa16.48■□□□□ 0.23
SCAMP2-212ENST00000569904 BRIP1Q9BX63 1249 aa16.48■□□□□ 0.23
SCAMP2-212ENST00000569904 PRAMEF22A3QJZ6 481 aa16.47■□□□□ 0.23
SCAMP2-212ENST00000569904 TAF7Q15545 349 aaPredicted RBP16.47■□□□□ 0.23
SCAMP2-212ENST00000569904 PRR5LQ6MZQ0 368 aa16.47■□□□□ 0.23
SCAMP2-212ENST00000569904 CLEC4GQ6UXB4 293 aa16.47■□□□□ 0.23
SCAMP2-212ENST00000569904 TTLL6Q8N841 843 aa16.47■□□□□ 0.23
SCAMP2-212ENST00000569904 H0YIN7 160 aa16.46■□□□□ 0.23
SCAMP2-212ENST00000569904 TOMM70O94826 608 aa16.46■□□□□ 0.23
SCAMP2-212ENST00000569904 BICDL1Q6ZP65 573 aa16.46■□□□□ 0.23
SCAMP2-212ENST00000569904 DZIP3Q86Y13 1208 aaKnown RBP16.46■□□□□ 0.23
SCAMP2-212ENST00000569904 C2CD5Q86YS7 1000 aa16.46■□□□□ 0.23
SCAMP2-212ENST00000569904 NUP98P52948 1817 aa16.45■□□□□ 0.22
SCAMP2-212ENST00000569904 PDE6BP35913 854 aa16.45■□□□□ 0.22
SCAMP2-212ENST00000569904 NPM2Q86SE8 214 aaKnown RBP16.45■□□□□ 0.22
SCAMP2-212ENST00000569904 SETDB2Q96T68 719 aa16.45■□□□□ 0.22
SCAMP2-212ENST00000569904 RNF181Q9P0P0 153 aa16.45■□□□□ 0.22
SCAMP2-212ENST00000569904 SLX4Q8IY92 1834 aa16.45■□□□□ 0.22
SCAMP2-212ENST00000569904 NBPF26B4DH59 902 aa16.44■□□□□ 0.22
SCAMP2-212ENST00000569904 NBPF10Q6P3W6 841 aaKnown RBP16.44■□□□□ 0.22
SCAMP2-212ENST00000569904 NBPF15Q8N660 670 aa16.44■□□□□ 0.22
SCAMP2-212ENST00000569904 PNISRQ8TF01 805 aaKnown RBP16.44■□□□□ 0.22
SCAMP2-212ENST00000569904 PNNQ9H307 717 aaKnown RBP16.44■□□□□ 0.22
SCAMP2-212ENST00000569904 NMRK2Q9NPI5 230 aa16.44■□□□□ 0.22
SCAMP2-212ENST00000569904 ZNF330Q9Y3S2 320 aaPredicted RBP16.44■□□□□ 0.22
SCAMP2-212ENST00000569904 KDM2BQ8NHM5 1336 aa16.44■□□□□ 0.22
SCAMP2-212ENST00000569904 NEFMP07197 916 aa16.43■□□□□ 0.22
SCAMP2-212ENST00000569904 PRELPP51888 382 aa16.43■□□□□ 0.22
SCAMP2-212ENST00000569904 NFE2L2Q16236 605 aa16.43■□□□□ 0.22
SCAMP2-212ENST00000569904 NFKBIEO00221 500 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms