RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 CSB-PGBD3P0DP91 1061 aa13.06□□□□□ -0.32
GDE1-205ENST00000569899 SLFN5Q08AF3 891 aa13.06□□□□□ -0.32
GDE1-205ENST00000569899 DUSP27Q5VZP5 1158 aa13.06□□□□□ -0.32
GDE1-205ENST00000569899 FAM83GA6ND36 823 aa13.06□□□□□ -0.32
GDE1-205ENST00000569899 MTHFSDQ2M296 383 aaKnown RBP13.06□□□□□ -0.32
GDE1-205ENST00000569899 EPAS1Q99814 870 aa13.06□□□□□ -0.32
GDE1-205ENST00000569899 NLRP2Q9NX02 1062 aa13.06□□□□□ -0.32
GDE1-205ENST00000569899 WDR17Q8IZU2 1322 aa13.05□□□□□ -0.32
GDE1-205ENST00000569899 JCADQ9P266 1359 aa13.05□□□□□ -0.32
GDE1-205ENST00000569899 E9PSI1 815 aa13.05□□□□□ -0.32
GDE1-205ENST00000569899 WDR63Q8IWG1 891 aa13.05□□□□□ -0.32
GDE1-205ENST00000569899 ZNF454Q8N9F8 522 aa13.05□□□□□ -0.32
GDE1-205ENST00000569899 THUMPD2Q9BTF0 503 aaKnown RBP13.05□□□□□ -0.32
GDE1-205ENST00000569899 TRMT2AQ8IZ69 625 aaKnown RBP13.04□□□□□ -0.32
GDE1-205ENST00000569899 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
GDE1-205ENST00000569899 LRP6O75581 1613 aa13.04□□□□□ -0.32
GDE1-205ENST00000569899 NUTM2BA6NNL0 878 aaPredicted RBP13.03□□□□□ -0.32
GDE1-205ENST00000569899 NUTM2EB1AL46 878 aaPredicted RBP13.03□□□□□ -0.32
GDE1-205ENST00000569899 ADAMTS2O95450 1211 aa13.03□□□□□ -0.32
GDE1-205ENST00000569899 LMOD3Q0VAK6 560 aa13.03□□□□□ -0.32
GDE1-205ENST00000569899 DCTN1Q14203 1278 aa13.03□□□□□ -0.32
GDE1-205ENST00000569899 TYW1BQ6NUM6 668 aa13.03□□□□□ -0.32
GDE1-205ENST00000569899 NUTM2AQ8IVF1 878 aaPredicted RBP13.03□□□□□ -0.32
GDE1-205ENST00000569899 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
GDE1-205ENST00000569899 ADAMTS7Q9UKP4 1686 aa13.03□□□□□ -0.32
GDE1-205ENST00000569899 MAP3K5Q99683 1374 aa13.03□□□□□ -0.32
GDE1-205ENST00000569899 SCN11AQ9UI33 1791 aa13.03□□□□□ -0.32
GDE1-205ENST00000569899 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.32
GDE1-205ENST00000569899 STRN4Q9NRL3 753 aa13.02□□□□□ -0.32
GDE1-205ENST00000569899 BTG4Q9NY30 223 aa13.02□□□□□ -0.32
GDE1-205ENST00000569899 HSPA1LP34931 641 aa13.02□□□□□ -0.33
GDE1-205ENST00000569899 EN1Q05925 392 aaPredicted RBP13.02□□□□□ -0.33
GDE1-205ENST00000569899 LARP1Q6PKG0 1096 aaKnown RBP13.02□□□□□ -0.33
GDE1-205ENST00000569899 TOM1L2Q6ZVM7 507 aa13.02□□□□□ -0.33
GDE1-205ENST00000569899 GPIHBP1Q8IV16 184 aa13.02□□□□□ -0.33
GDE1-205ENST00000569899 IL16Q14005 1332 aa13.02□□□□□ -0.33
GDE1-205ENST00000569899 FANCIQ9NVI1 1328 aa13.02□□□□□ -0.33
GDE1-205ENST00000569899 CRB1P82279 1406 aa13.02□□□□□ -0.33
GDE1-205ENST00000569899 MCM10Q7L590 875 aa13.01□□□□□ -0.33
GDE1-205ENST00000569899 ZC3H15Q8WU90 426 aaKnown RBP13.01□□□□□ -0.33
GDE1-205ENST00000569899 TSR2Q969E8 191 aaKnown RBP13.01□□□□□ -0.33
GDE1-205ENST00000569899 SUPT16HQ9Y5B9 1047 aaKnown RBP13.01□□□□□ -0.33
GDE1-205ENST00000569899 OVOS2A0A0G2JMS6 1433 aa13.01□□□□□ -0.33
GDE1-205ENST00000569899 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.01□□□□□ -0.33
GDE1-205ENST00000569899 KDM3BQ7LBC6 1761 aa13□□□□□ -0.33
GDE1-205ENST00000569899 SLIT2O94813 1529 aa13□□□□□ -0.33
GDE1-205ENST00000569899 RAPGEF4Q8WZA2 1011 aa13□□□□□ -0.33
GDE1-205ENST00000569899 FBXW7Q969H0 707 aa13□□□□□ -0.33
GDE1-205ENST00000569899 ZDHHC16Q969W1 377 aa13□□□□□ -0.33
GDE1-205ENST00000569899 ZNF530Q6P9A1 599 aaPredicted RBP12.99□□□□□ -0.33
GDE1-205ENST00000569899 MYH16Q9H6N6 1097 aa12.99□□□□□ -0.33
GDE1-205ENST00000569899 PLEKHG2Q9H7P9 1386 aa12.99□□□□□ -0.33
GDE1-205ENST00000569899 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
GDE1-205ENST00000569899 EVA1CP58658 441 aa12.99□□□□□ -0.33
GDE1-205ENST00000569899 PLEKHO1Q53GL0 409 aaPredicted RBP12.99□□□□□ -0.33
GDE1-205ENST00000569899 LCE2DQ5TA82 110 aaPredicted RBP12.99□□□□□ -0.33
GDE1-205ENST00000569899 MARVELD3Q96A59 401 aa12.99□□□□□ -0.33
GDE1-205ENST00000569899 CARD10Q9BWT7 1032 aa12.99□□□□□ -0.33
GDE1-205ENST00000569899 RCAN3Q9UKA8 241 aa12.99□□□□□ -0.33
GDE1-205ENST00000569899 GTF3C3Q9Y5Q9 886 aa12.99□□□□□ -0.33
GDE1-205ENST00000569899 GNAT3A8MTJ3 354 aa12.98□□□□□ -0.33
GDE1-205ENST00000569899 MAP3K7O43318 606 aa12.98□□□□□ -0.33
GDE1-205ENST00000569899 CALD1Q05682 793 aaKnown RBP12.98□□□□□ -0.33
GDE1-205ENST00000569899 AMOTQ4VCS5 1084 aa12.98□□□□□ -0.33
GDE1-205ENST00000569899 RTF1Q92541 710 aaKnown RBP12.98□□□□□ -0.33
GDE1-205ENST00000569899 LAS1LQ9Y4W2 734 aaKnown RBP12.98□□□□□ -0.33
GDE1-205ENST00000569899 SPATA31A6Q5VVP1 1343 aa12.97□□□□□ -0.33
GDE1-205ENST00000569899 PSDA5PKW4 1024 aaPredicted RBP12.97□□□□□ -0.33
GDE1-205ENST00000569899 PPP4R3BQ5MIZ7 849 aa12.97□□□□□ -0.33
GDE1-205ENST00000569899 ADAM33Q9BZ11 813 aa12.97□□□□□ -0.33
GDE1-205ENST00000569899 IFT57Q9NWB7 429 aa12.97□□□□□ -0.33
GDE1-205ENST00000569899 TOGARAM1Q9Y4F4 1720 aa12.97□□□□□ -0.33
GDE1-205ENST00000569899 DISP2A7MBM2 1401 aa12.97□□□□□ -0.33
GDE1-205ENST00000569899 GPR37O15354 613 aa12.96□□□□□ -0.33
GDE1-205ENST00000569899 ZNF853P0CG23 659 aa12.96□□□□□ -0.33
GDE1-205ENST00000569899 EMP3P54852 163 aa12.96□□□□□ -0.33
GDE1-205ENST00000569899 USP35Q9P2H5 1018 aa12.96□□□□□ -0.33
GDE1-205ENST00000569899 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.33
GDE1-205ENST00000569899 CEMIPQ8WUJ3 1361 aa12.96□□□□□ -0.34
GDE1-205ENST00000569899 HTATSF1O43719 755 aaKnown RBP12.95□□□□□ -0.34
GDE1-205ENST00000569899 GNAI1P63096 354 aa12.95□□□□□ -0.34
GDE1-205ENST00000569899 TSR1Q2NL82 804 aaKnown RBP12.95□□□□□ -0.34
GDE1-205ENST00000569899 AKAP4Q5JQC9 854 aa12.95□□□□□ -0.34
GDE1-205ENST00000569899 C1orf141Q5JVX7 400 aa12.95□□□□□ -0.34
GDE1-205ENST00000569899 CDHR5Q9HBB8 845 aa12.95□□□□□ -0.34
GDE1-205ENST00000569899 MBIPQ9NS73 344 aa12.95□□□□□ -0.34
GDE1-205ENST00000569899 RNF123Q5XPI4 1314 aa12.95□□□□□ -0.34
GDE1-205ENST00000569899 EXOSC9Q06265 439 aaKnown RBP12.95□□□□□ -0.34
GDE1-205ENST00000569899 IL17REQ8NFR9 667 aa12.95□□□□□ -0.34
GDE1-205ENST00000569899 MRC1P22897 1456 aa12.94□□□□□ -0.34
GDE1-205ENST00000569899 IL2RBP14784 551 aa12.94□□□□□ -0.34
GDE1-205ENST00000569899 IRX6P78412 446 aaPredicted RBP12.94□□□□□ -0.34
GDE1-205ENST00000569899 C8orf37Q96NL8 207 aa12.94□□□□□ -0.34
GDE1-205ENST00000569899 SPG7Q9UQ90 795 aa12.94□□□□□ -0.34
GDE1-205ENST00000569899 BCL9LQ86UU0 1499 aa12.93□□□□□ -0.34
GDE1-205ENST00000569899 RRP1P56182 461 aaKnown RBP12.93□□□□□ -0.34
GDE1-205ENST00000569899 MPRIPQ6WCQ1 1025 aa12.93□□□□□ -0.34
GDE1-205ENST00000569899 LGR6Q9HBX8 967 aa12.93□□□□□ -0.34
GDE1-205ENST00000569899 NEFLP07196 543 aa12.92□□□□□ -0.34
GDE1-205ENST00000569899 PHKG2P15735 406 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms