RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 TIAM2Q8IVF5 1701 aa11.83□□□□□ -0.52
SNX29-208ENST00000569801 SLIT3O75094 1523 aa11.82□□□□□ -0.52
SNX29-208ENST00000569801 TRAF5O00463 557 aa11.82□□□□□ -0.52
SNX29-208ENST00000569801 SRPK2P78362 688 aaKnown RBP11.82□□□□□ -0.52
SNX29-208ENST00000569801 HHIPL1Q96JK4 782 aa11.82□□□□□ -0.52
SNX29-208ENST00000569801 PRO3102Q9H379 93 aa11.82□□□□□ -0.52
SNX29-208ENST00000569801 ROCK2O75116 1388 aaKnown RBP11.81□□□□□ -0.52
SNX29-208ENST00000569801 SYNE4Q8N205 404 aa11.79□□□□□ -0.52
SNX29-208ENST00000569801 NLRP2Q9NX02 1062 aa11.79□□□□□ -0.52
SNX29-208ENST00000569801 MTMR10Q9NXD2 777 aa11.79□□□□□ -0.52
SNX29-208ENST00000569801 TNFRSF10AO00220 468 aa11.78□□□□□ -0.52
SNX29-208ENST00000569801 GNPATO15228 680 aa11.78□□□□□ -0.52
SNX29-208ENST00000569801 CABP1Q9NZU7 370 aa11.78□□□□□ -0.52
SNX29-208ENST00000569801 C5P01031 1676 aa11.78□□□□□ -0.52
SNX29-208ENST00000569801 TOGARAM1Q9Y4F4 1720 aa11.77□□□□□ -0.52
SNX29-208ENST00000569801 BRCA2P51587 3418 aa11.77□□□□□ -0.53
SNX29-208ENST00000569801 INTS3Q68E01 1043 aaKnown RBP11.77□□□□□ -0.53
SNX29-208ENST00000569801 P2RX7Q99572 595 aaKnown RBP11.77□□□□□ -0.53
SNX29-208ENST00000569801 EVC2Q86UK5 1308 aa11.77□□□□□ -0.53
SNX29-208ENST00000569801 ARHGEF25Q86VW2 580 aa11.76□□□□□ -0.53
SNX29-208ENST00000569801 SYMPKQ92797 1274 aaKnown RBP11.76□□□□□ -0.53
SNX29-208ENST00000569801 PALLDQ8WX93 1383 aa11.76□□□□□ -0.53
SNX29-208ENST00000569801 C4BP0C0L5 1744 aa11.75□□□□□ -0.53
SNX29-208ENST00000569801 ADAMTSL1Q8N6G6 1762 aa11.75□□□□□ -0.53
SNX29-208ENST00000569801 CELF2O95319 508 aaKnown RBP11.75□□□□□ -0.53
SNX29-208ENST00000569801 NLRP6P59044 892 aa11.75□□□□□ -0.53
SNX29-208ENST00000569801 GPR153Q6NV75 609 aa11.75□□□□□ -0.53
SNX29-208ENST00000569801 ARIH1Q9Y4X5 557 aaPredicted RBP11.75□□□□□ -0.53
SNX29-208ENST00000569801 KIF23Q02241 960 aaPredicted RBP11.74□□□□□ -0.53
SNX29-208ENST00000569801 TTLL6Q8N841 843 aa11.74□□□□□ -0.53
SNX29-208ENST00000569801 TONSLQ96HA7 1378 aa11.74□□□□□ -0.53
SNX29-208ENST00000569801 SBNO2Q9Y2G9 1366 aa11.74□□□□□ -0.53
SNX29-208ENST00000569801 CPSF1Q10570 1443 aaKnown RBP11.74□□□□□ -0.53
SNX29-208ENST00000569801 MON2Q7Z3U7 1717 aa11.74□□□□□ -0.53
SNX29-208ENST00000569801 A0A1W2PPC1 479 aa11.73□□□□□ -0.53
SNX29-208ENST00000569801 GYS1P13807 737 aa11.73□□□□□ -0.53
SNX29-208ENST00000569801 LINC00116Q8NCU8 138 aa11.73□□□□□ -0.53
SNX29-208ENST00000569801 ZNF296Q8WUU4 475 aaPredicted RBP11.73□□□□□ -0.53
SNX29-208ENST00000569801 RNF123Q5XPI4 1314 aa11.72□□□□□ -0.53
SNX29-208ENST00000569801 TRIM26Q12899 539 aaPredicted RBP11.72□□□□□ -0.53
SNX29-208ENST00000569801 C4AP0C0L4 1744 aa11.72□□□□□ -0.53
SNX29-208ENST00000569801 TRAPPC3LQ5T215 181 aa11.71□□□□□ -0.53
SNX29-208ENST00000569801 BICDL1Q6ZP65 573 aa11.71□□□□□ -0.53
SNX29-208ENST00000569801 CARD11Q9BXL7 1154 aa11.71□□□□□ -0.53
SNX29-208ENST00000569801 LAMB4A4D0S4 1761 aa11.7□□□□□ -0.54
SNX29-208ENST00000569801 TTC21BQ7Z4L5 1316 aa11.7□□□□□ -0.54
SNX29-208ENST00000569801 CD163L1Q9NR16 1453 aa11.7□□□□□ -0.54
SNX29-208ENST00000569801 ZNF692Q9BU19 519 aaPredicted RBP11.69□□□□□ -0.54
SNX29-208ENST00000569801 UBR3Q6ZT12 1888 aa11.69□□□□□ -0.54
SNX29-208ENST00000569801 LAMA3Q16787 3333 aa11.69□□□□□ -0.54
SNX29-208ENST00000569801 RGPD5Q99666 1765 aa11.69□□□□□ -0.54
SNX29-208ENST00000569801 INSRP06213 1382 aa11.68□□□□□ -0.54
SNX29-208ENST00000569801 RPTORQ8N122 1335 aa11.68□□□□□ -0.54
SNX29-208ENST00000569801 ZNF541Q9H0D2 1346 aa11.68□□□□□ -0.54
SNX29-208ENST00000569801 SCN4AP35499 1836 aa11.68□□□□□ -0.54
SNX29-208ENST00000569801 FAM155AB1AL88 458 aaPredicted RBP11.68□□□□□ -0.54
SNX29-208ENST00000569801 SOX12O15370 315 aa11.68□□□□□ -0.54
SNX29-208ENST00000569801 DPF3Q92784 378 aa11.68□□□□□ -0.54
SNX29-208ENST00000569801 NFAT5O94916 1531 aa11.68□□□□□ -0.54
SNX29-208ENST00000569801 KTN1Q86UP2 1357 aaKnown RBP11.67□□□□□ -0.54
SNX29-208ENST00000569801 TTC21AQ8NDW8 1320 aa11.67□□□□□ -0.54
SNX29-208ENST00000569801 DDR1Q08345 913 aa11.67□□□□□ -0.54
SNX29-208ENST00000569801 ARHGEF1Q92888 912 aaKnown RBP11.67□□□□□ -0.54
SNX29-208ENST00000569801 TAOK3Q9H2K8 898 aa11.67□□□□□ -0.54
SNX29-208ENST00000569801 C21orf2O43822 256 aa11.66□□□□□ -0.54
SNX29-208ENST00000569801 CSRNP1Q96S65 589 aa11.66□□□□□ -0.54
SNX29-208ENST00000569801 ZNF408Q9H9D4 720 aa11.66□□□□□ -0.54
SNX29-208ENST00000569801 IGSF5Q9NSI5 407 aa11.66□□□□□ -0.54
SNX29-208ENST00000569801 HCN4Q9Y3Q4 1203 aa11.66□□□□□ -0.54
SNX29-208ENST00000569801 KIAA0100Q14667 2235 aaKnown RBP11.66□□□□□ -0.54
SNX29-208ENST00000569801 LTBP3Q9NS15 1303 aa11.65□□□□□ -0.54
SNX29-208ENST00000569801 HUNKP57058 714 aa11.65□□□□□ -0.54
SNX29-208ENST00000569801 MUC3AQ02505 3323 aa11.65□□□□□ -0.54
SNX29-208ENST00000569801 UNC79Q9P2D8 2635 aa11.65□□□□□ -0.54
SNX29-208ENST00000569801 USP31Q70CQ4 1352 aa11.65□□□□□ -0.55
SNX29-208ENST00000569801 LTN1O94822 1766 aa11.64□□□□□ -0.55
SNX29-208ENST00000569801 KCNH5Q8NCM2 988 aa11.64□□□□□ -0.55
SNX29-208ENST00000569801 TMC1Q8TDI8 760 aa11.64□□□□□ -0.55
SNX29-208ENST00000569801 SMARCC1Q92922 1105 aaPredicted RBP11.64□□□□□ -0.55
SNX29-208ENST00000569801 TESK2Q96S53 571 aa11.64□□□□□ -0.55
SNX29-208ENST00000569801 SLC12A5Q9H2X9 1139 aa11.64□□□□□ -0.55
SNX29-208ENST00000569801 RTCBQ9Y3I0 505 aaKnown RBP11.64□□□□□ -0.55
SNX29-208ENST00000569801 CCDC88AQ3V6T2 1871 aa11.63□□□□□ -0.55
SNX29-208ENST00000569801 DOT1LQ8TEK3 1739 aa11.63□□□□□ -0.55
SNX29-208ENST00000569801 TBC1D8O95759 1140 aa11.63□□□□□ -0.55
SNX29-208ENST00000569801 RFC4P35249 363 aa11.63□□□□□ -0.55
SNX29-208ENST00000569801 MPRIPQ6WCQ1 1025 aa11.63□□□□□ -0.55
SNX29-208ENST00000569801 NME9Q86XW9 330 aa11.63□□□□□ -0.55
SNX29-208ENST00000569801 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.63□□□□□ -0.55
SNX29-208ENST00000569801 A0A1W2PP64 1363 aa11.63□□□□□ -0.55
SNX29-208ENST00000569801 TAF1LQ8IZX4 1826 aa11.63□□□□□ -0.55
SNX29-208ENST00000569801 EDC4Q6P2E9 1401 aaKnown RBP11.62□□□□□ -0.55
SNX29-208ENST00000569801 ST20-MTHFSA0A0A6YYL1 179 aa11.62□□□□□ -0.55
SNX29-208ENST00000569801 KCNA4P22459 653 aa11.62□□□□□ -0.55
SNX29-208ENST00000569801 MRE11P49959 708 aa11.62□□□□□ -0.55
SNX29-208ENST00000569801 ITPK1Q13572 414 aa11.62□□□□□ -0.55
SNX29-208ENST00000569801 RGMBQ6NW40 437 aa11.62□□□□□ -0.55
SNX29-208ENST00000569801 CCDC102AQ96A19 550 aa11.62□□□□□ -0.55
SNX29-208ENST00000569801 PUS7Q96PZ0 661 aaKnown RBP11.62□□□□□ -0.55
SNX29-208ENST00000569801 TMEM106CQ9BVX2 250 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms