RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 ANKRD44Q8N8A2 993 aa28.32■■■□□ 2.12
VCPKMT-205ENST00000569518 BACH2Q9BYV9 841 aa28.32■■■□□ 2.12
VCPKMT-205ENST00000569518 THRAP3Q9Y2W1 955 aaKnown RBP28.32■■■□□ 2.12
VCPKMT-205ENST00000569518 ITGB4P16144 1822 aa28.3■■■□□ 2.12
VCPKMT-205ENST00000569518 CEP85Q6P2H3 762 aa28.3■■■□□ 2.12
VCPKMT-205ENST00000569518 RPAP2Q8IXW5 612 aaPredicted RBP28.3■■■□□ 2.12
VCPKMT-205ENST00000569518 GCC1Q96CN9 775 aa28.3■■■□□ 2.12
VCPKMT-205ENST00000569518 CDCA7Q9BWT1 371 aaPredicted RBP28.3■■■□□ 2.12
VCPKMT-205ENST00000569518 SPATA31A5Q5VU36 1347 aa28.3■■■□□ 2.12
VCPKMT-205ENST00000569518 SPATA31A7Q8IWB4 1347 aa28.3■■■□□ 2.12
VCPKMT-205ENST00000569518 PI4KAP2A4QPH2 592 aa28.29■■■□□ 2.12
VCPKMT-205ENST00000569518 PI4KAP1Q8N8J0 262 aa28.29■■■□□ 2.12
VCPKMT-205ENST00000569518 DNAAF4Q8WXU2 420 aa28.29■■■□□ 2.12
VCPKMT-205ENST00000569518 NUCB1Q02818 461 aa28.29■■■□□ 2.12
VCPKMT-205ENST00000569518 USP16Q9Y5T5 823 aa28.28■■■□□ 2.12
VCPKMT-205ENST00000569518 GNAI3P08754 354 aa28.27■■■□□ 2.12
VCPKMT-205ENST00000569518 BEND3Q5T5X7 828 aa28.27■■■□□ 2.12
VCPKMT-205ENST00000569518 EXOC5O00471 708 aa28.26■■■□□ 2.11
VCPKMT-205ENST00000569518 LRP10Q7Z4F1 713 aa28.26■■■□□ 2.11
VCPKMT-205ENST00000569518 SRCIN1Q9C0H9 1055 aa28.26■■■□□ 2.11
VCPKMT-205ENST00000569518 USP44Q9H0E7 712 aa28.26■■■□□ 2.11
VCPKMT-205ENST00000569518 KSR2Q6VAB6 950 aa28.25■■■□□ 2.11
VCPKMT-205ENST00000569518 TMOD3Q9NYL9 352 aa28.25■■■□□ 2.11
VCPKMT-205ENST00000569518 GNAI2P04899 355 aa28.25■■■□□ 2.11
VCPKMT-205ENST00000569518 DCTPP1Q9H773 170 aa28.23■■■□□ 2.11
VCPKMT-205ENST00000569518 BCL9LQ86UU0 1499 aa28.23■■■□□ 2.11
VCPKMT-205ENST00000569518 FAM161AQ3B820 660 aa28.22■■■□□ 2.11
VCPKMT-205ENST00000569518 C8orf34Q49A92 452 aa28.22■■■□□ 2.11
VCPKMT-205ENST00000569518 BARGINQ6ZT62 677 aa28.22■■■□□ 2.11
VCPKMT-205ENST00000569518 MAP3K2Q9Y2U5 619 aa28.22■■■□□ 2.11
VCPKMT-205ENST00000569518 SPATA31A6Q5VVP1 1343 aa28.22■■■□□ 2.11
VCPKMT-205ENST00000569518 CHD1LQ86WJ1 897 aa28.22■■■□□ 2.11
VCPKMT-205ENST00000569518 PIGBQ92521 554 aa28.22■■■□□ 2.11
VCPKMT-205ENST00000569518 ERBB4Q15303 1308 aa28.22■■■□□ 2.11
VCPKMT-205ENST00000569518 UNC5CLQ8IV45 518 aa28.21■■■□□ 2.11
VCPKMT-205ENST00000569518 BCL9O00512 1426 aa28.21■■■□□ 2.11
VCPKMT-205ENST00000569518 DOT1LQ8TEK3 1739 aa28.2■■■□□ 2.11
VCPKMT-205ENST00000569518 DDX58O95786 925 aaKnown RBP28.2■■■□□ 2.11
VCPKMT-205ENST00000569518 MYL6BP14649 208 aa28.19■■■□□ 2.1
VCPKMT-205ENST00000569518 ALDH1L1O75891 902 aa28.18■■■□□ 2.1
VCPKMT-205ENST00000569518 XAGE3Q8WTP9 111 aa28.18■■■□□ 2.1
VCPKMT-205ENST00000569518 IBTKQ9P2D0 1353 aaPredicted RBP28.18■■■□□ 2.1
VCPKMT-205ENST00000569518 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.18■■■□□ 2.1
VCPKMT-205ENST00000569518 UBTFL1P0CB47 393 aaPredicted RBP28.18■■■□□ 2.1
VCPKMT-205ENST00000569518 DDB1Q16531 1140 aa28.18■■■□□ 2.1
VCPKMT-205ENST00000569518 HMMRO75330 724 aa28.17■■■□□ 2.1
VCPKMT-205ENST00000569518 FNBP4Q8N3X1 1017 aaPredicted RBP28.17■■■□□ 2.1
VCPKMT-205ENST00000569518 C8orf37Q96NL8 207 aa28.17■■■□□ 2.1
VCPKMT-205ENST00000569518 LNPKQ9C0E8 428 aa28.17■■■□□ 2.1
VCPKMT-205ENST00000569518 LRRFIP2Q9Y608 721 aaKnown RBP28.17■■■□□ 2.1
VCPKMT-205ENST00000569518 PTCD1O75127 700 aaKnown RBP28.16■■■□□ 2.1
VCPKMT-205ENST00000569518 AIMP1Q12904 312 aaKnown RBP28.16■■■□□ 2.1
VCPKMT-205ENST00000569518 ANKRD45Q5TZF3 282 aa28.16■■■□□ 2.1
VCPKMT-205ENST00000569518 COPS6Q7L5N1 327 aa28.16■■■□□ 2.1
VCPKMT-205ENST00000569518 VPS72Q15906 364 aa28.15■■■□□ 2.1
VCPKMT-205ENST00000569518 NGLY1Q96IV0 654 aa28.15■■■□□ 2.1
VCPKMT-205ENST00000569518 ATG3Q9NT62 314 aa28.15■■■□□ 2.1
VCPKMT-205ENST00000569518 ASAP1Q9ULH1 1129 aa28.15■■■□□ 2.1
VCPKMT-205ENST00000569518 NBPF26B4DH59 902 aa28.15■■■□□ 2.1
VCPKMT-205ENST00000569518 NBPF14Q5TI25 921 aa28.15■■■□□ 2.1
VCPKMT-205ENST00000569518 NBPF10Q6P3W6 841 aaKnown RBP28.15■■■□□ 2.1
VCPKMT-205ENST00000569518 NBPF15Q8N660 670 aa28.15■■■□□ 2.1
VCPKMT-205ENST00000569518 LINS1Q8NG48 757 aa28.15■■■□□ 2.1
VCPKMT-205ENST00000569518 ARFGEF2Q9Y6D5 1785 aa28.15■■■□□ 2.1
VCPKMT-205ENST00000569518 NBPF7P0C2Y1 421 aaPredicted RBP28.13■■■□□ 2.09
VCPKMT-205ENST00000569518 PIP4K2AP48426 406 aaPredicted RBP28.13■■■□□ 2.09
VCPKMT-205ENST00000569518 ATP8B2P98198 1209 aa28.13■■■□□ 2.09
VCPKMT-205ENST00000569518 VSIG10Q8N0Z9 540 aa28.13■■■□□ 2.09
VCPKMT-205ENST00000569518 CCDC9Q9Y3X0 531 aaKnown RBP28.13■■■□□ 2.09
VCPKMT-205ENST00000569518 RIC3Q7Z5B4 369 aa28.11■■■□□ 2.09
VCPKMT-205ENST00000569518 MARCH10Q8NA82 808 aaPredicted RBP28.11■■■□□ 2.09
VCPKMT-205ENST00000569518 PNMA6EA0A0J9YXQ4 647 aa28.11■■■□□ 2.09
VCPKMT-205ENST00000569518 HSPA1LP34931 641 aa28.11■■■□□ 2.09
VCPKMT-205ENST00000569518 CWF19L2Q2TBE0 894 aaKnown RBP28.11■■■□□ 2.09
VCPKMT-205ENST00000569518 NUP188Q5SRE5 1749 aa28.1■■■□□ 2.09
VCPKMT-205ENST00000569518 ANKRD13DQ6ZTN6 518 aa28.1■■■□□ 2.09
VCPKMT-205ENST00000569518 METTL22Q9BUU2 404 aaPredicted RBP28.1■■■□□ 2.09
VCPKMT-205ENST00000569518 UTYO14607 1347 aa28.09■■■□□ 2.09
VCPKMT-205ENST00000569518 IGKV5-2P06315 115 aa28.09■■■□□ 2.09
VCPKMT-205ENST00000569518 A1BGP04217 495 aa28.08■■■□□ 2.09
VCPKMT-205ENST00000569518 KAT6BQ8WYB5 2073 aa28.07■■■□□ 2.08
VCPKMT-205ENST00000569518 PRIM1P49642 420 aaKnown RBP28.07■■■□□ 2.08
VCPKMT-205ENST00000569518 SSH3Q8TE77 659 aa28.07■■■□□ 2.08
VCPKMT-205ENST00000569518 TEX13AQ9BXU3 409 aaPredicted RBP28.07■■■□□ 2.08
VCPKMT-205ENST00000569518 POLA2Q14181 598 aa28.06■■■□□ 2.08
VCPKMT-205ENST00000569518 PLBD2Q8NHP8 589 aa28.06■■■□□ 2.08
VCPKMT-205ENST00000569518 NEURL1BA8MQ27 555 aa28.05■■■□□ 2.08
VCPKMT-205ENST00000569518 NEXNQ0ZGT2 675 aa28.05■■■□□ 2.08
VCPKMT-205ENST00000569518 C9orf78Q9NZ63 289 aaPredicted RBP28.05■■■□□ 2.08
VCPKMT-205ENST00000569518 TJP1Q07157 1748 aa28.05■■■□□ 2.08
VCPKMT-205ENST00000569518 THSD7AQ9UPZ6 1657 aa28.05■■■□□ 2.08
VCPKMT-205ENST00000569518 AFDNP55196 1824 aaKnown RBP28.05■■■□□ 2.08
VCPKMT-205ENST00000569518 GRM8O00222 908 aa28.04■■■□□ 2.08
VCPKMT-205ENST00000569518 FAM98CQ17RN3 349 aaKnown RBP28.04■■■□□ 2.08
VCPKMT-205ENST00000569518 DNAJC10Q8IXB1 793 aa28.04■■■□□ 2.08
VCPKMT-205ENST00000569518 MTX1Q13505 466 aa28.04■■■□□ 2.08
VCPKMT-205ENST00000569518 SYTL4Q96C24 671 aaPredicted RBP28.04■■■□□ 2.08
VCPKMT-205ENST00000569518 SLC4A9Q96Q91 983 aa28.04■■■□□ 2.08
VCPKMT-205ENST00000569518 USP21Q9UK80 565 aa28.04■■■□□ 2.08
VCPKMT-205ENST00000569518 PPP1R42Q7Z4L9 355 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms