RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 PDIA4P13667 645 aaKnown RBP9.65□□□□□ -0.86
LINC00559-201ENST00000569476 MX1P20591 662 aa9.65□□□□□ -0.86
LINC00559-201ENST00000569476 FRAT2O75474 233 aaPredicted RBP9.65□□□□□ -0.86
LINC00559-201ENST00000569476 ATF3P18847 181 aa9.65□□□□□ -0.86
LINC00559-201ENST00000569476 NHSL1Q5SYE7 1610 aa9.65□□□□□ -0.86
LINC00559-201ENST00000569476 C5P01031 1676 aa9.65□□□□□ -0.86
LINC00559-201ENST00000569476 AK9Q5TCS8 1911 aa9.65□□□□□ -0.86
LINC00559-201ENST00000569476 KSR2Q6VAB6 950 aa9.65□□□□□ -0.87
LINC00559-201ENST00000569476 USP44Q9H0E7 712 aa9.65□□□□□ -0.87
LINC00559-201ENST00000569476 TMEM94Q12767 1356 aa9.64□□□□□ -0.87
LINC00559-201ENST00000569476 LRP6O75581 1613 aa9.64□□□□□ -0.87
LINC00559-201ENST00000569476 GLI3P10071 1580 aa9.64□□□□□ -0.87
LINC00559-201ENST00000569476 ADCY9O60503 1353 aa9.64□□□□□ -0.87
LINC00559-201ENST00000569476 TATP17735 454 aaPredicted RBP9.64□□□□□ -0.87
LINC00559-201ENST00000569476 GOLGA6L22H0YM25 854 aa9.64□□□□□ -0.87
LINC00559-201ENST00000569476 HIP1O00291 1037 aa9.64□□□□□ -0.87
LINC00559-201ENST00000569476 GPATCH3Q96I76 525 aa9.64□□□□□ -0.87
LINC00559-201ENST00000569476 DDX21Q9NR30 783 aaKnown RBP eCLIP9.64□□□□□ -0.87
LINC00559-201ENST00000569476 C14orf37Q86TY3 774 aa9.63□□□□□ -0.87
LINC00559-201ENST00000569476 PLCH1Q4KWH8 1693 aa9.63□□□□□ -0.87
LINC00559-201ENST00000569476 GIGYF1O75420 1035 aaPredicted RBP9.63□□□□□ -0.87
LINC00559-201ENST00000569476 INTS4Q96HW7 963 aaKnown RBP9.63□□□□□ -0.87
LINC00559-201ENST00000569476 ESYT1Q9BSJ8 1104 aa9.63□□□□□ -0.87
LINC00559-201ENST00000569476 SPATA31A3Q5VYP0 1347 aa9.63□□□□□ -0.87
LINC00559-201ENST00000569476 RAD50Q92878 1312 aa9.63□□□□□ -0.87
LINC00559-201ENST00000569476 SLC4A10Q6U841 1118 aa9.62□□□□□ -0.87
LINC00559-201ENST00000569476 LINS1Q8NG48 757 aa9.62□□□□□ -0.87
LINC00559-201ENST00000569476 SOX12O15370 315 aa9.62□□□□□ -0.87
LINC00559-201ENST00000569476 KDM6AO15550 1401 aaPredicted RBP9.62□□□□□ -0.87
LINC00559-201ENST00000569476 IFNL2Q8IZJ0 200 aa9.62□□□□□ -0.87
LINC00559-201ENST00000569476 DCAF5Q96JK2 942 aa9.62□□□□□ -0.87
LINC00559-201ENST00000569476 LRRFIP2Q9Y608 721 aaKnown RBP9.62□□□□□ -0.87
LINC00559-201ENST00000569476 RAPGEF4Q8WZA2 1011 aa9.62□□□□□ -0.87
LINC00559-201ENST00000569476 SLC52A2Q9HAB3 445 aa9.62□□□□□ -0.87
LINC00559-201ENST00000569476 MIS18AQ9NYP9 233 aa9.62□□□□□ -0.87
LINC00559-201ENST00000569476 LARP1Q6PKG0 1096 aaKnown RBP9.61□□□□□ -0.87
LINC00559-201ENST00000569476 SNRKQ9NRH2 765 aa9.61□□□□□ -0.87
LINC00559-201ENST00000569476 NUP188Q5SRE5 1749 aa9.61□□□□□ -0.87
LINC00559-201ENST00000569476 ARFGEF2Q9Y6D5 1785 aa9.61□□□□□ -0.87
LINC00559-201ENST00000569476 RUFY2Q8WXA3 655 aa9.61□□□□□ -0.87
LINC00559-201ENST00000569476 SPEF2Q9C093 1822 aa9.61□□□□□ -0.87
LINC00559-201ENST00000569476 FSD2A1L4K1 749 aa9.61□□□□□ -0.87
LINC00559-201ENST00000569476 F6X3S4 739 aa9.61□□□□□ -0.87
LINC00559-201ENST00000569476 CNTROBQ8N137 903 aa9.61□□□□□ -0.87
LINC00559-201ENST00000569476 ORAI2Q96SN7 254 aa9.61□□□□□ -0.87
LINC00559-201ENST00000569476 GLRX3O76003 335 aaKnown RBP9.6□□□□□ -0.87
LINC00559-201ENST00000569476 CYP2E1P05181 493 aaPredicted RBP9.6□□□□□ -0.87
LINC00559-201ENST00000569476 PHKG2P15735 406 aa9.6□□□□□ -0.87
LINC00559-201ENST00000569476 CHMLP26374 656 aa9.6□□□□□ -0.87
LINC00559-201ENST00000569476 SLKQ9H2G2 1235 aaPredicted RBP9.6□□□□□ -0.87
LINC00559-201ENST00000569476 NUTM2GQ5VZR2 741 aa9.6□□□□□ -0.87
LINC00559-201ENST00000569476 RHPN1Q8TCX5 695 aa9.6□□□□□ -0.87
LINC00559-201ENST00000569476 LTV1Q96GA3 475 aaPredicted RBP9.6□□□□□ -0.87
LINC00559-201ENST00000569476 COL22A1Q8NFW1 1626 aaPredicted RBP9.6□□□□□ -0.87
LINC00559-201ENST00000569476 CICQ96RK0 1608 aaPredicted RBP9.6□□□□□ -0.87
LINC00559-201ENST00000569476 CUL4AQ13619 759 aa9.6□□□□□ -0.87
LINC00559-201ENST00000569476 KCNB2Q92953 911 aa9.6□□□□□ -0.87
LINC00559-201ENST00000569476 LGR6Q9HBX8 967 aa9.6□□□□□ -0.87
LINC00559-201ENST00000569476 CHPF2Q9P2E5 772 aa9.6□□□□□ -0.87
LINC00559-201ENST00000569476 MEGF6O75095 1541 aa9.6□□□□□ -0.87
LINC00559-201ENST00000569476 TNS2Q63HR2 1409 aa9.59□□□□□ -0.87
LINC00559-201ENST00000569476 PLEKHG5O94827 1062 aa9.59□□□□□ -0.87
LINC00559-201ENST00000569476 NKX1-1Q15270 411 aaPredicted RBP9.59□□□□□ -0.87
LINC00559-201ENST00000569476 PPP1R42Q7Z4L9 355 aa9.59□□□□□ -0.87
LINC00559-201ENST00000569476 SHANK3Q9BYB0 1731 aa9.59□□□□□ -0.87
LINC00559-201ENST00000569476 STRCQ7RTU9 1775 aa9.59□□□□□ -0.87
LINC00559-201ENST00000569476 PNMA6EA0A0J9YXQ4 647 aa9.58□□□□□ -0.88
LINC00559-201ENST00000569476 ERVV-2B6SEH9 535 aa9.58□□□□□ -0.88
LINC00559-201ENST00000569476 USHBP1Q8N6Y0 703 aa9.58□□□□□ -0.88
LINC00559-201ENST00000569476 SOS2Q07890 1332 aaPredicted RBP9.58□□□□□ -0.88
LINC00559-201ENST00000569476 PCDH11XQ9BZA7 1347 aa9.58□□□□□ -0.88
LINC00559-201ENST00000569476 PCDH11YQ9BZA8 1340 aa9.58□□□□□ -0.88
LINC00559-201ENST00000569476 AFDNP55196 1824 aaKnown RBP9.58□□□□□ -0.88
LINC00559-201ENST00000569476 TRAK2O60296 914 aa9.58□□□□□ -0.88
LINC00559-201ENST00000569476 HSP90AA1P07900 732 aaKnown RBP9.58□□□□□ -0.88
LINC00559-201ENST00000569476 SNRPA1P09661 255 aaKnown RBP9.58□□□□□ -0.88
LINC00559-201ENST00000569476 MRE11P49959 708 aa9.58□□□□□ -0.88
LINC00559-201ENST00000569476 NEXNQ0ZGT2 675 aa9.58□□□□□ -0.88
LINC00559-201ENST00000569476 C16orf71Q8IYS4 520 aaPredicted RBP9.58□□□□□ -0.88
LINC00559-201ENST00000569476 TNPO1Q92973 898 aaKnown RBP9.58□□□□□ -0.88
LINC00559-201ENST00000569476 TM6SF1Q9BZW5 370 aa9.58□□□□□ -0.88
LINC00559-201ENST00000569476 BCL11AQ9H165 835 aa9.58□□□□□ -0.88
LINC00559-201ENST00000569476 ALDH8A1Q9H2A2 487 aaPredicted RBP9.58□□□□□ -0.88
LINC00559-201ENST00000569476 WNK3Q9BYP7 1800 aa9.58□□□□□ -0.88
LINC00559-201ENST00000569476 ZNF790Q6PG37 636 aa9.57□□□□□ -0.88
LINC00559-201ENST00000569476 PI4K2BQ8TCG2 481 aa9.57□□□□□ -0.88
LINC00559-201ENST00000569476 COL14A1Q05707 1796 aaKnown RBP9.57□□□□□ -0.88
LINC00559-201ENST00000569476 PI4KAP2A4QPH2 592 aa9.57□□□□□ -0.88
LINC00559-201ENST00000569476 HSPA4P34932 840 aa9.57□□□□□ -0.88
LINC00559-201ENST00000569476 PI4KAP1Q8N8J0 262 aa9.57□□□□□ -0.88
LINC00559-201ENST00000569476 FMNL2Q96PY5 1086 aa9.57□□□□□ -0.88
LINC00559-201ENST00000569476 METTL22Q9BUU2 404 aaPredicted RBP9.57□□□□□ -0.88
LINC00559-201ENST00000569476 PHAXQ9H814 394 aaKnown RBP9.57□□□□□ -0.88
LINC00559-201ENST00000569476 JCADQ9P266 1359 aa9.57□□□□□ -0.88
LINC00559-201ENST00000569476 SMARCA5O60264 1052 aaPredicted RBP9.57□□□□□ -0.88
LINC00559-201ENST00000569476 GOLGA6L3A6NEY3 463 aa9.56□□□□□ -0.88
LINC00559-201ENST00000569476 GRM8O00222 908 aa9.56□□□□□ -0.88
LINC00559-201ENST00000569476 CLASRPQ8N2M8 674 aaKnown RBP9.56□□□□□ -0.88
LINC00559-201ENST00000569476 LRRC59Q96AG4 307 aaKnown RBP9.56□□□□□ -0.88
LINC00559-201ENST00000569476 EVI5LQ96CN4 794 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms