RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 LNPKQ9C0E8 428 aa7.12□□□□□ -1.27
CDH13-213ENST00000569454 WWC3Q9ULE0 1092 aa7.12□□□□□ -1.27
CDH13-213ENST00000569454 HDAC5Q9UQL6 1122 aa7.12□□□□□ -1.27
CDH13-213ENST00000569454 KDM3BQ7LBC6 1761 aa7.12□□□□□ -1.27
CDH13-213ENST00000569454 IBTKQ9P2D0 1353 aaPredicted RBP7.11□□□□□ -1.27
CDH13-213ENST00000569454 NPHP3Q7Z494 1330 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 FOXO3O43524 673 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 CDC45O75419 566 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 GNAI2P04899 355 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 ATF3P18847 181 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 RBM25P49756 843 aaKnown RBP7.11□□□□□ -1.27
CDH13-213ENST00000569454 TEFQ10587 303 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 FLIIQ13045 1269 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 NBR1Q14596 966 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 C1orf141Q5JVX7 400 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 CEP85Q6P2H3 762 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 CASC1Q6TDU7 716 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 CADPS2Q86UW7 1296 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 IL27Q8NEV9 243 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 C22orf23Q9BZE7 217 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 ADAMTS7Q9UKP4 1686 aa7.11□□□□□ -1.27
CDH13-213ENST00000569454 TNS3Q68CZ2 1445 aa7.1□□□□□ -1.27
CDH13-213ENST00000569454 ATN1P54259 1190 aaPredicted RBP7.1□□□□□ -1.27
CDH13-213ENST00000569454 FKBP5Q13451 457 aaPredicted RBP7.1□□□□□ -1.27
CDH13-213ENST00000569454 HDGFL1Q5TGJ6 251 aa7.1□□□□□ -1.27
CDH13-213ENST00000569454 NUTM2GQ5VZR2 741 aa7.1□□□□□ -1.27
CDH13-213ENST00000569454 KRT28Q7Z3Y7 464 aa7.1□□□□□ -1.27
CDH13-213ENST00000569454 SIRT2Q8IXJ6 389 aa7.1□□□□□ -1.27
CDH13-213ENST00000569454 IL17REQ8NFR9 667 aa7.1□□□□□ -1.27
CDH13-213ENST00000569454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.1□□□□□ -1.27
CDH13-213ENST00000569454 FBXO3Q9UK99 471 aa7.1□□□□□ -1.27
CDH13-213ENST00000569454 TMEM94Q12767 1356 aa7.09□□□□□ -1.27
CDH13-213ENST00000569454 ERBB3P21860 1342 aa7.09□□□□□ -1.27
CDH13-213ENST00000569454 SEC24BO95487 1268 aa7.09□□□□□ -1.27
CDH13-213ENST00000569454 MFAP1P55081 439 aaKnown RBP7.09□□□□□ -1.27
CDH13-213ENST00000569454 PLCB2Q00722 1185 aa7.09□□□□□ -1.27
CDH13-213ENST00000569454 KRT24Q2M2I5 525 aa7.09□□□□□ -1.27
CDH13-213ENST00000569454 ZNF530Q6P9A1 599 aaPredicted RBP7.09□□□□□ -1.27
CDH13-213ENST00000569454 HSCBQ8IWL3 235 aa7.09□□□□□ -1.27
CDH13-213ENST00000569454 ANKRD24Q8TF21 1146 aa7.09□□□□□ -1.27
CDH13-213ENST00000569454 LTV1Q96GA3 475 aaPredicted RBP7.09□□□□□ -1.27
CDH13-213ENST00000569454 C1orf115Q9H7X2 142 aa7.09□□□□□ -1.27
CDH13-213ENST00000569454 CACNA1AO00555 2505 aa7.08□□□□□ -1.28
CDH13-213ENST00000569454 CPDO75976 1380 aa7.08□□□□□ -1.28
CDH13-213ENST00000569454 AOX1Q06278 1338 aa7.08□□□□□ -1.28
CDH13-213ENST00000569454 POTEFA5A3E0 1075 aa7.08□□□□□ -1.28
CDH13-213ENST00000569454 NBPF6Q5VWK0 638 aa7.08□□□□□ -1.28
CDH13-213ENST00000569454 SNX21Q969T3 373 aa7.08□□□□□ -1.28
CDH13-213ENST00000569454 NBPF4Q96M43 638 aa7.08□□□□□ -1.28
CDH13-213ENST00000569454 ORAI2Q96SN7 254 aa7.08□□□□□ -1.28
CDH13-213ENST00000569454 MEIS3Q99687 375 aa7.08□□□□□ -1.28
CDH13-213ENST00000569454 SRCIN1Q9C0H9 1055 aa7.08□□□□□ -1.28
CDH13-213ENST00000569454 OSBPL3Q9H4L5 887 aa7.08□□□□□ -1.28
CDH13-213ENST00000569454 MRC1P22897 1456 aa7.08□□□□□ -1.28
CDH13-213ENST00000569454 PARP4Q9UKK3 1724 aaKnown RBP7.07□□□□□ -1.28
CDH13-213ENST00000569454 PSDA5PKW4 1024 aaPredicted RBP7.07□□□□□ -1.28
CDH13-213ENST00000569454 EPB41L2O43491 1005 aaKnown RBP7.07□□□□□ -1.28
CDH13-213ENST00000569454 REC8O95072 547 aa7.07□□□□□ -1.28
CDH13-213ENST00000569454 HSP90AB1P08238 724 aaKnown RBP7.07□□□□□ -1.28
CDH13-213ENST00000569454 UBTFL1P0CB47 393 aaPredicted RBP7.07□□□□□ -1.28
CDH13-213ENST00000569454 HSPA6P17066 643 aa7.07□□□□□ -1.28
CDH13-213ENST00000569454 EIF4A1P60842 406 aaKnown RBP7.07□□□□□ -1.28
CDH13-213ENST00000569454 NFKBIBQ15653 356 aa7.07□□□□□ -1.28
CDH13-213ENST00000569454 HSP90AB4PQ58FF6 505 aa7.07□□□□□ -1.28
CDH13-213ENST00000569454 TTC22Q5TAA0 569 aa7.07□□□□□ -1.28
CDH13-213ENST00000569454 SLC4A10Q6U841 1118 aa7.07□□□□□ -1.28
CDH13-213ENST00000569454 PLEKHM2Q8IWE5 1019 aa7.07□□□□□ -1.28
CDH13-213ENST00000569454 RAPGEF4Q8WZA2 1011 aa7.07□□□□□ -1.28
CDH13-213ENST00000569454 TBC1D2Q9BYX2 928 aa7.07□□□□□ -1.28
CDH13-213ENST00000569454 DBF4Q9UBU7 674 aaPredicted RBP7.07□□□□□ -1.28
CDH13-213ENST00000569454 CIZ1Q9ULV3 898 aaPredicted RBP7.07□□□□□ -1.28
CDH13-213ENST00000569454 HEG1Q9ULI3 1381 aa7.07□□□□□ -1.28
CDH13-213ENST00000569454 PXDNQ92626 1479 aa7.06□□□□□ -1.28
CDH13-213ENST00000569454 SIPA1L3O60292 1781 aaPredicted RBP7.06□□□□□ -1.28
CDH13-213ENST00000569454 BTBD11A6QL63 1104 aa7.06□□□□□ -1.28
CDH13-213ENST00000569454 RNMTO43148 476 aaKnown RBP7.06□□□□□ -1.28
CDH13-213ENST00000569454 RAB11FIP3O75154 756 aa7.06□□□□□ -1.28
CDH13-213ENST00000569454 PTMSP20962 102 aa7.06□□□□□ -1.28
CDH13-213ENST00000569454 TBC1D9Q6ZT07 1266 aa7.06□□□□□ -1.28
CDH13-213ENST00000569454 G2E3Q7L622 706 aa7.06□□□□□ -1.28
CDH13-213ENST00000569454 USHBP1Q8N6Y0 703 aa7.06□□□□□ -1.28
CDH13-213ENST00000569454 LRRCC1Q9C099 1032 aa7.06□□□□□ -1.28
CDH13-213ENST00000569454 MIS18AQ9NYP9 233 aa7.06□□□□□ -1.28
CDH13-213ENST00000569454 SPG7Q9UQ90 795 aa7.06□□□□□ -1.28
CDH13-213ENST00000569454 EP400Q96L91 3159 aa7.06□□□□□ -1.28
CDH13-213ENST00000569454 CRYBG1Q9Y4K1 1723 aa7.06□□□□□ -1.28
CDH13-213ENST00000569454 PKD1L3Q7Z443 1732 aa7.05□□□□□ -1.28
CDH13-213ENST00000569454 ALDH1L1O75891 902 aa7.05□□□□□ -1.28
CDH13-213ENST00000569454 DDX58O95786 925 aaKnown RBP7.05□□□□□ -1.28
CDH13-213ENST00000569454 TATP17735 454 aaPredicted RBP7.05□□□□□ -1.28
CDH13-213ENST00000569454 DEKP35659 375 aaKnown RBP7.05□□□□□ -1.28
CDH13-213ENST00000569454 ATP8B2P98198 1209 aa7.05□□□□□ -1.28
CDH13-213ENST00000569454 RABEP1Q15276 862 aa7.05□□□□□ -1.28
CDH13-213ENST00000569454 LMOD2Q6P5Q4 547 aa7.05□□□□□ -1.28
CDH13-213ENST00000569454 DNAAF4Q8WXU2 420 aa7.05□□□□□ -1.28
CDH13-213ENST00000569454 HYPKQ9NX55 129 aa7.05□□□□□ -1.28
CDH13-213ENST00000569454 CHMP5Q9NZZ3 219 aa7.05□□□□□ -1.28
CDH13-213ENST00000569454 SPATA31A3Q5VYP0 1347 aa7.04□□□□□ -1.28
CDH13-213ENST00000569454 ZBTB7CA1YPR0 619 aa7.04□□□□□ -1.28
CDH13-213ENST00000569454 F6X3S4 739 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms