RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 PGPEP1Q9NXJ5 209 aa10.35□□□□□ -0.75
HERPUD1-214ENST00000568651 DCTN4Q9UJW0 460 aa10.35□□□□□ -0.75
HERPUD1-214ENST00000568651 PTPRGP23470 1445 aa10.34□□□□□ -0.75
HERPUD1-214ENST00000568651 FOXK2Q01167 660 aa10.34□□□□□ -0.75
HERPUD1-214ENST00000568651 ECM1Q16610 540 aa10.34□□□□□ -0.75
HERPUD1-214ENST00000568651 PPP1R26Q5T8A7 1209 aaPredicted RBP10.34□□□□□ -0.75
HERPUD1-214ENST00000568651 IFFO2Q5TF58 517 aa10.34□□□□□ -0.75
HERPUD1-214ENST00000568651 NPAS4Q8IUM7 802 aa10.34□□□□□ -0.75
HERPUD1-214ENST00000568651 MKNK1Q9BUB5 465 aa10.34□□□□□ -0.75
HERPUD1-214ENST00000568651 EMILIN1Q9Y6C2 1016 aa10.34□□□□□ -0.75
HERPUD1-214ENST00000568651 TLL2Q9Y6L7 1015 aa10.34□□□□□ -0.75
HERPUD1-214ENST00000568651 HECW2Q9P2P5 1572 aa10.34□□□□□ -0.75
HERPUD1-214ENST00000568651 ANKRD33BA6NCL7 494 aa10.33□□□□□ -0.76
HERPUD1-214ENST00000568651 ARHGAP4P98171 946 aa10.33□□□□□ -0.76
HERPUD1-214ENST00000568651 MTFR1Q15390 333 aa10.33□□□□□ -0.76
HERPUD1-214ENST00000568651 SCG3Q8WXD2 468 aaKnown RBP10.33□□□□□ -0.76
HERPUD1-214ENST00000568651 ASB16Q96NS5 453 aa10.33□□□□□ -0.76
HERPUD1-214ENST00000568651 ATAD2Q6PL18 1390 aa10.33□□□□□ -0.76
HERPUD1-214ENST00000568651 COL17A1Q9UMD9 1497 aaPredicted RBP10.33□□□□□ -0.76
HERPUD1-214ENST00000568651 TOP2BQ02880 1626 aa10.33□□□□□ -0.76
HERPUD1-214ENST00000568651 FAM13AO94988 1023 aa10.32□□□□□ -0.76
HERPUD1-214ENST00000568651 LIAT1Q6ZQX7 453 aa10.32□□□□□ -0.76
HERPUD1-214ENST00000568651 ZSCAN29Q8IWY8 852 aaPredicted RBP10.32□□□□□ -0.76
HERPUD1-214ENST00000568651 TNS4Q8IZW8 715 aa10.32□□□□□ -0.76
HERPUD1-214ENST00000568651 PURBQ96QR8 312 aaKnown RBP10.32□□□□□ -0.76
HERPUD1-214ENST00000568651 BCL2L13Q9BXK5 485 aa10.32□□□□□ -0.76
HERPUD1-214ENST00000568651 SCHIP1Q9P0W5 487 aaPredicted RBP10.32□□□□□ -0.76
HERPUD1-214ENST00000568651 ASXL2Q76L83 1435 aa10.32□□□□□ -0.76
HERPUD1-214ENST00000568651 UNCXA6NJT0 531 aa10.31□□□□□ -0.76
HERPUD1-214ENST00000568651 VTI1AQ96AJ9 217 aa10.31□□□□□ -0.76
HERPUD1-214ENST00000568651 TSPAN10Q9H1Z9 355 aaPredicted RBP10.31□□□□□ -0.76
HERPUD1-214ENST00000568651 KIAA0586Q9BVV6 1533 aa10.3□□□□□ -0.76
HERPUD1-214ENST00000568651 LGR5O75473 907 aa10.3□□□□□ -0.76
HERPUD1-214ENST00000568651 ZNF16P17020 682 aaPredicted RBP10.3□□□□□ -0.76
HERPUD1-214ENST00000568651 POTEAQ6S8J7 498 aa10.3□□□□□ -0.76
HERPUD1-214ENST00000568651 XAGE2Q96GT9 111 aa10.3□□□□□ -0.76
HERPUD1-214ENST00000568651 ANO2Q9NQ90 1003 aa10.3□□□□□ -0.76
HERPUD1-214ENST00000568651 A6NJY4 79 aa10.29□□□□□ -0.76
HERPUD1-214ENST00000568651 MAPK1P28482 360 aa10.29□□□□□ -0.76
HERPUD1-214ENST00000568651 SMTNP53814 917 aa10.29□□□□□ -0.76
HERPUD1-214ENST00000568651 CAPN12Q6ZSI9 719 aa10.29□□□□□ -0.76
HERPUD1-214ENST00000568651 RGL4Q8IZJ4 473 aa10.29□□□□□ -0.76
HERPUD1-214ENST00000568651 FBXO41Q8TF61 875 aa10.29□□□□□ -0.76
HERPUD1-214ENST00000568651 EMID1Q96A84 441 aaPredicted RBP10.29□□□□□ -0.76
HERPUD1-214ENST00000568651 BIVM-ERCC5R4GMW8 1640 aa10.29□□□□□ -0.76
HERPUD1-214ENST00000568651 PPP1R12BO60237 982 aaPredicted RBP10.28□□□□□ -0.76
HERPUD1-214ENST00000568651 PSMA6P60900 246 aaKnown RBP10.28□□□□□ -0.76
HERPUD1-214ENST00000568651 ZNF326Q5BKZ1 582 aaKnown RBP10.28□□□□□ -0.76
HERPUD1-214ENST00000568651 C16orf46Q6P387 395 aa10.28□□□□□ -0.76
HERPUD1-214ENST00000568651 NBPF15Q8N660 670 aa10.28□□□□□ -0.76
HERPUD1-214ENST00000568651 MRGPRX2Q96LB1 330 aa10.28□□□□□ -0.76
HERPUD1-214ENST00000568651 C2orf49Q9BVC5 232 aaPredicted RBP10.28□□□□□ -0.76
HERPUD1-214ENST00000568651 SERTAD1Q9UHV2 236 aa10.28□□□□□ -0.76
HERPUD1-214ENST00000568651 IGF1RP08069 1367 aa10.27□□□□□ -0.76
HERPUD1-214ENST00000568651 CDK2AP1O14519 115 aa10.27□□□□□ -0.77
HERPUD1-214ENST00000568651 NR3C2P08235 984 aa10.27□□□□□ -0.77
HERPUD1-214ENST00000568651 SLC19A1P41440 591 aa10.27□□□□□ -0.77
HERPUD1-214ENST00000568651 SLC9A9Q8IVB4 645 aa10.27□□□□□ -0.77
HERPUD1-214ENST00000568651 CITED4Q96RK1 184 aa10.27□□□□□ -0.77
HERPUD1-214ENST00000568651 RBCK1Q9BYM8 510 aa10.27□□□□□ -0.77
HERPUD1-214ENST00000568651 PLB1Q6P1J6 1458 aa10.27□□□□□ -0.77
HERPUD1-214ENST00000568651 ABCC2Q92887 1545 aa10.27□□□□□ -0.77
HERPUD1-214ENST00000568651 TNIKQ9UKE5 1360 aa10.26□□□□□ -0.77
HERPUD1-214ENST00000568651 STAU1O95793 577 aaKnown RBP10.26□□□□□ -0.77
HERPUD1-214ENST00000568651 ADH1AP07327 375 aa10.26□□□□□ -0.77
HERPUD1-214ENST00000568651 VAMP1P23763 118 aa10.26□□□□□ -0.77
HERPUD1-214ENST00000568651 ADD1P35611 737 aaKnown RBP10.26□□□□□ -0.77
HERPUD1-214ENST00000568651 HIRAP54198 1017 aaPredicted RBP10.26□□□□□ -0.77
HERPUD1-214ENST00000568651 FBXO33Q7Z6M2 555 aa10.26□□□□□ -0.77
HERPUD1-214ENST00000568651 GIPC2Q8TF65 315 aa10.26□□□□□ -0.77
HERPUD1-214ENST00000568651 MYO19Q96H55 970 aa10.26□□□□□ -0.77
HERPUD1-214ENST00000568651 IGSF5Q9NSI5 407 aa10.26□□□□□ -0.77
HERPUD1-214ENST00000568651 CHMP3Q9Y3E7 222 aa10.26□□□□□ -0.77
HERPUD1-214ENST00000568651 HRH3Q9Y5N1 445 aa10.26□□□□□ -0.77
HERPUD1-214ENST00000568651 A0A1W2PRU2 124 aa10.25□□□□□ -0.77
HERPUD1-214ENST00000568651 MTMR3Q13615 1198 aa10.25□□□□□ -0.77
HERPUD1-214ENST00000568651 NAA30Q147X3 362 aaPredicted RBP10.25□□□□□ -0.77
HERPUD1-214ENST00000568651 ALKBH2Q6NS38 261 aa10.25□□□□□ -0.77
HERPUD1-214ENST00000568651 MRRFQ96E11 262 aaKnown RBP10.25□□□□□ -0.77
HERPUD1-214ENST00000568651 ESYT1Q9BSJ8 1104 aa10.25□□□□□ -0.77
HERPUD1-214ENST00000568651 ARHGEF10LQ9HCE6 1279 aa10.25□□□□□ -0.77
HERPUD1-214ENST00000568651 IL2RAP01589 272 aa10.24□□□□□ -0.77
HERPUD1-214ENST00000568651 CLN3Q13286 438 aa10.24□□□□□ -0.77
HERPUD1-214ENST00000568651 BCL11AQ9H165 835 aa10.24□□□□□ -0.77
HERPUD1-214ENST00000568651 KIAA1522Q9P206 1035 aaPredicted RBP10.24□□□□□ -0.77
HERPUD1-214ENST00000568651 IQSEC3Q9UPP2 1182 aaPredicted RBP10.24□□□□□ -0.77
HERPUD1-214ENST00000568651 PPRC1Q5VV67 1664 aaKnown RBP10.23□□□□□ -0.77
HERPUD1-214ENST00000568651 NDUFB5O43674 189 aa10.23□□□□□ -0.77
HERPUD1-214ENST00000568651 SPRYD7Q5W111 196 aa10.23□□□□□ -0.77
HERPUD1-214ENST00000568651 Q6ZVU0 165 aa10.23□□□□□ -0.77
HERPUD1-214ENST00000568651 SPNS2Q8IVW8 549 aa10.23□□□□□ -0.77
HERPUD1-214ENST00000568651 CARMIL2Q6F5E8 1435 aa10.23□□□□□ -0.77
HERPUD1-214ENST00000568651 UACAQ9BZF9 1416 aa10.23□□□□□ -0.77
HERPUD1-214ENST00000568651 EPRSP07814 1512 aaKnown RBP10.23□□□□□ -0.77
HERPUD1-214ENST00000568651 NNTQ13423 1086 aa10.22□□□□□ -0.77
HERPUD1-214ENST00000568651 TLR1Q15399 786 aa10.22□□□□□ -0.77
HERPUD1-214ENST00000568651 CNKSR1Q969H4 720 aa10.22□□□□□ -0.77
HERPUD1-214ENST00000568651 STIM2Q9P246 746 aa10.22□□□□□ -0.77
HERPUD1-214ENST00000568651 GLI2P10070 1586 aa10.22□□□□□ -0.77
HERPUD1-214ENST00000568651 MPSTP25325 297 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms