RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 PI4K2BQ8TCG2 481 aa22.23■■□□□ 1.15
PKD1-235ENST00000568591 MAP3K5Q99683 1374 aa22.23■■□□□ 1.15
PKD1-235ENST00000568591 NWD1Q149M9 1564 aa22.22■■□□□ 1.15
PKD1-235ENST00000568591 CPA1P15085 419 aa22.22■■□□□ 1.15
PKD1-235ENST00000568591 LRRC37A3O60309 1634 aa22.21■■□□□ 1.15
PKD1-235ENST00000568591 KCNQ3O43525 872 aa22.21■■□□□ 1.15
PKD1-235ENST00000568591 HSPA4P34932 840 aa22.21■■□□□ 1.15
PKD1-235ENST00000568591 RASEFQ8IZ41 740 aa22.21■■□□□ 1.15
PKD1-235ENST00000568591 MPNDQ8N594 471 aa22.21■■□□□ 1.15
PKD1-235ENST00000568591 INTS4Q96HW7 963 aaKnown RBP22.21■■□□□ 1.15
PKD1-235ENST00000568591 SRGAP3O43295 1099 aa22.21■■□□□ 1.15
PKD1-235ENST00000568591 HTATSF1O43719 755 aaKnown RBP22.21■■□□□ 1.15
PKD1-235ENST00000568591 RHPN1Q8TCX5 695 aa22.21■■□□□ 1.15
PKD1-235ENST00000568591 MBD3O95983 291 aa22.2■■□□□ 1.14
PKD1-235ENST00000568591 C14orf37Q86TY3 774 aa22.2■■□□□ 1.14
PKD1-235ENST00000568591 SRCIN1Q9C0H9 1055 aa22.2■■□□□ 1.14
PKD1-235ENST00000568591 RRP9O43818 475 aaKnown RBP22.2■■□□□ 1.14
PKD1-235ENST00000568591 USP48Q86UV5 1035 aa22.2■■□□□ 1.14
PKD1-235ENST00000568591 LGR6Q9HBX8 967 aa22.2■■□□□ 1.14
PKD1-235ENST00000568591 R3HCC1Q9Y3T6 440 aaKnown RBP22.2■■□□□ 1.14
PKD1-235ENST00000568591 SPG7Q9UQ90 795 aa22.19■■□□□ 1.14
PKD1-235ENST00000568591 KIF13AQ9H1H9 1805 aa22.19■■□□□ 1.14
PKD1-235ENST00000568591 DIP2AQ14689 1571 aa22.19■■□□□ 1.14
PKD1-235ENST00000568591 ABTB2Q8N961 1025 aa22.19■■□□□ 1.14
PKD1-235ENST00000568591 CHPF2Q9P2E5 772 aa22.19■■□□□ 1.14
PKD1-235ENST00000568591 RPAP1Q9BWH6 1393 aaPredicted RBP22.18■■□□□ 1.14
PKD1-235ENST00000568591 SNX14Q9Y5W7 946 aa22.18■■□□□ 1.14
PKD1-235ENST00000568591 TPM2P07951 284 aa22.18■■□□□ 1.14
PKD1-235ENST00000568591 CWC27Q6UX04 472 aaKnown RBP22.18■■□□□ 1.14
PKD1-235ENST00000568591 ZBTB7CA1YPR0 619 aa22.17■■□□□ 1.14
PKD1-235ENST00000568591 POLA2Q14181 598 aa22.17■■□□□ 1.14
PKD1-235ENST00000568591 EID1Q9Y6B2 187 aa22.17■■□□□ 1.14
PKD1-235ENST00000568591 PI4KAP2A4QPH2 592 aa22.17■■□□□ 1.14
PKD1-235ENST00000568591 SGSM2O43147 1006 aa22.17■■□□□ 1.14
PKD1-235ENST00000568591 HS1BP3Q53T59 392 aa22.17■■□□□ 1.14
PKD1-235ENST00000568591 PI4KAP1Q8N8J0 262 aa22.17■■□□□ 1.14
PKD1-235ENST00000568591 ZKSCAN5Q9Y2L8 839 aa22.17■■□□□ 1.14
PKD1-235ENST00000568591 CNPY2Q9Y2B0 182 aa22.16■■□□□ 1.14
PKD1-235ENST00000568591 AK2P54819 239 aa22.16■■□□□ 1.14
PKD1-235ENST00000568591 RBM10P98175 930 aaKnown RBP22.16■■□□□ 1.14
PKD1-235ENST00000568591 RBM33Q96EV2 1170 aaKnown RBP22.16■■□□□ 1.14
PKD1-235ENST00000568591 IL17RAQ96F46 866 aa22.16■■□□□ 1.14
PKD1-235ENST00000568591 LSG1Q9H089 658 aaKnown RBP22.16■■□□□ 1.14
PKD1-235ENST00000568591 RAD50Q92878 1312 aa22.16■■□□□ 1.14
PKD1-235ENST00000568591 DDX54Q8TDD1 881 aaKnown RBP22.15■■□□□ 1.14
PKD1-235ENST00000568591 TSPY26PQ9H489 355 aa22.15■■□□□ 1.14
PKD1-235ENST00000568591 TCHHQ07283 1943 aa22.15■■□□□ 1.14
PKD1-235ENST00000568591 ZNF500O60304 480 aaPredicted RBP22.15■■□□□ 1.14
PKD1-235ENST00000568591 LARGE1O95461 756 aa22.15■■□□□ 1.14
PKD1-235ENST00000568591 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.15■■□□□ 1.14
PKD1-235ENST00000568591 RUFY3Q7L099 469 aa22.15■■□□□ 1.14
PKD1-235ENST00000568591 AOX1Q06278 1338 aa22.14■■□□□ 1.13
PKD1-235ENST00000568591 KCNA6P17658 529 aa22.14■■□□□ 1.13
PKD1-235ENST00000568591 TTC14Q96N46 770 aa22.14■■□□□ 1.13
PKD1-235ENST00000568591 BEND3Q5T5X7 828 aa22.13■■□□□ 1.13
PKD1-235ENST00000568591 WDR33Q9C0J8 1336 aaKnown RBP22.13■■□□□ 1.13
PKD1-235ENST00000568591 EIF4A1P60842 406 aaKnown RBP22.13■■□□□ 1.13
PKD1-235ENST00000568591 NBPF6Q5VWK0 638 aa22.12■■□□□ 1.13
PKD1-235ENST00000568591 KIF1BPQ96EK5 621 aa22.12■■□□□ 1.13
PKD1-235ENST00000568591 NBPF4Q96M43 638 aa22.12■■□□□ 1.13
PKD1-235ENST00000568591 PXDNLA1KZ92 1463 aa22.12■■□□□ 1.13
PKD1-235ENST00000568591 RAB11FIP3O75154 756 aa22.12■■□□□ 1.13
PKD1-235ENST00000568591 TBX22Q9Y458 520 aa22.12■■□□□ 1.13
PKD1-235ENST00000568591 PTH1RQ03431 593 aa22.11■■□□□ 1.13
PKD1-235ENST00000568591 COL9A3Q14050 684 aaPredicted RBP22.11■■□□□ 1.13
PKD1-235ENST00000568591 DNAAF4Q8WXU2 420 aa22.11■■□□□ 1.13
PKD1-235ENST00000568591 PA2G4Q9UQ80 394 aaKnown RBP22.11■■□□□ 1.13
PKD1-235ENST00000568591 MARF1Q9Y4F3 1742 aaKnown RBP22.11■■□□□ 1.13
PKD1-235ENST00000568591 ADCK5Q3MIX3 580 aa22.1■■□□□ 1.13
PKD1-235ENST00000568591 SYT1P21579 422 aa22.1■■□□□ 1.13
PKD1-235ENST00000568591 ZNF830Q96NB3 372 aaPredicted RBP22.1■■□□□ 1.13
PKD1-235ENST00000568591 SETD1BQ9UPS6 1966 aaKnown RBP22.1■■□□□ 1.13
PKD1-235ENST00000568591 CASTP20810 708 aaKnown RBP22.09■■□□□ 1.13
PKD1-235ENST00000568591 CNTROBQ8N137 903 aa22.09■■□□□ 1.13
PKD1-235ENST00000568591 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.09■■□□□ 1.13
PKD1-235ENST00000568591 OS9Q13438 667 aaPredicted RBP22.09■■□□□ 1.13
PKD1-235ENST00000568591 LRRC59Q96AG4 307 aaKnown RBP22.09■■□□□ 1.13
PKD1-235ENST00000568591 CCDC39Q9UFE4 941 aa22.09■■□□□ 1.13
PKD1-235ENST00000568591 ADCY9O60503 1353 aa22.09■■□□□ 1.13
PKD1-235ENST00000568591 CEMIPQ8WUJ3 1361 aa22.08■■□□□ 1.13
PKD1-235ENST00000568591 FIBPO43427 364 aa22.08■■□□□ 1.13
PKD1-235ENST00000568591 PROSER3Q2NL68 480 aa22.08■■□□□ 1.13
PKD1-235ENST00000568591 MPRIPQ6WCQ1 1025 aa22.08■■□□□ 1.13
PKD1-235ENST00000568591 USP25Q9UHP3 1055 aa22.08■■□□□ 1.13
PKD1-235ENST00000568591 PRAMEF22A3QJZ6 481 aa22.08■■□□□ 1.12
PKD1-235ENST00000568591 ZSCAN22P10073 491 aaPredicted RBP22.08■■□□□ 1.12
PKD1-235ENST00000568591 VSIG10Q8N0Z9 540 aa22.08■■□□□ 1.12
PKD1-235ENST00000568591 PTMAP06454 111 aaKnown RBP22.07■■□□□ 1.12
PKD1-235ENST00000568591 SYAP1Q96A49 352 aaPredicted RBP22.07■■□□□ 1.12
PKD1-235ENST00000568591 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.07■■□□□ 1.12
PKD1-235ENST00000568591 STX6O43752 255 aa22.07■■□□□ 1.12
PKD1-235ENST00000568591 CCDC83Q8IWF9 413 aa22.07■■□□□ 1.12
PKD1-235ENST00000568591 LIMCH1Q9UPQ0 1083 aa22.07■■□□□ 1.12
PKD1-235ENST00000568591 N4BP2Q86UW6 1770 aaPredicted RBP22.06■■□□□ 1.12
PKD1-235ENST00000568591 HCLS1P14317 486 aaPredicted RBP22.06■■□□□ 1.12
PKD1-235ENST00000568591 PRPF40BQ6NWY9 871 aaKnown RBP22.06■■□□□ 1.12
PKD1-235ENST00000568591 CACNA1FO60840 1977 aa22.06■■□□□ 1.12
PKD1-235ENST00000568591 BABAM1Q9NWV8 329 aa22.06■■□□□ 1.12
PKD1-235ENST00000568591 UQCRHLA0A096LP55 91 aa22.05■■□□□ 1.12
PKD1-235ENST00000568591 UQCRHP07919 91 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms