RNA–Protein interactions for RNA: ENST00000568562.1

ATP6V0C-204, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

TSL 3 BASIC

Gene ATP6V0C, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-204ENST00000568562 TM4SF1P30408 202 aa25.42■■□□□ 1.66
ATP6V0C-204ENST00000568562 AKAP4Q5JQC9 854 aa25.42■■□□□ 1.66
ATP6V0C-204ENST00000568562 SLC52A2Q9HAB3 445 aa25.41■■□□□ 1.66
ATP6V0C-204ENST00000568562 TIAM2Q8IVF5 1701 aa25.4■■□□□ 1.66
ATP6V0C-204ENST00000568562 SLC39A6Q13433 755 aa25.4■■□□□ 1.66
ATP6V0C-204ENST00000568562 RRAGCQ9HB90 399 aa25.4■■□□□ 1.66
ATP6V0C-204ENST00000568562 LGR6Q9HBX8 967 aa25.4■■□□□ 1.66
ATP6V0C-204ENST00000568562 UBR2Q8IWV8 1755 aa25.39■■□□□ 1.66
ATP6V0C-204ENST00000568562 RASSF7Q02833 373 aa25.39■■□□□ 1.66
ATP6V0C-204ENST00000568562 KNSTRNQ9Y448 316 aa25.39■■□□□ 1.66
ATP6V0C-204ENST00000568562 COL15A1P39059 1388 aa25.39■■□□□ 1.65
ATP6V0C-204ENST00000568562 FSTL1Q12841 308 aa25.38■■□□□ 1.65
ATP6V0C-204ENST00000568562 CYP19A1P11511 503 aaPredicted RBP25.37■■□□□ 1.65
ATP6V0C-204ENST00000568562 NFIXQ14938 502 aa25.37■■□□□ 1.65
ATP6V0C-204ENST00000568562 ZBTB1Q9Y2K1 713 aa25.37■■□□□ 1.65
ATP6V0C-204ENST00000568562 RNMTO43148 476 aaKnown RBP25.36■■□□□ 1.65
ATP6V0C-204ENST00000568562 HMOX1P09601 288 aa25.36■■□□□ 1.65
ATP6V0C-204ENST00000568562 KLRG1Q96E93 195 aa25.36■■□□□ 1.65
ATP6V0C-204ENST00000568562 NARFQ9UHQ1 456 aa25.35■■□□□ 1.65
ATP6V0C-204ENST00000568562 AMER1Q5JTC6 1135 aaPredicted RBP25.33■■□□□ 1.65
ATP6V0C-204ENST00000568562 ANKRD31Q8N7Z5 1873 aa25.33■■□□□ 1.65
ATP6V0C-204ENST00000568562 BCL2L12Q9HB09 334 aa25.33■■□□□ 1.65
ATP6V0C-204ENST00000568562 CARMIL3Q8ND23 1372 aa25.32■■□□□ 1.64
ATP6V0C-204ENST00000568562 SERPINB2P05120 415 aa25.31■■□□□ 1.64
ATP6V0C-204ENST00000568562 SCN7AQ01118 1682 aa25.31■■□□□ 1.64
ATP6V0C-204ENST00000568562 PRELPP51888 382 aa25.3■■□□□ 1.64
ATP6V0C-204ENST00000568562 MTHFSDQ2M296 383 aaKnown RBP25.3■■□□□ 1.64
ATP6V0C-204ENST00000568562 ZC3H4Q9UPT8 1303 aaKnown RBP25.3■■□□□ 1.64
ATP6V0C-204ENST00000568562 CACNA1SQ13698 1873 aa25.3■■□□□ 1.64
ATP6V0C-204ENST00000568562 COL11A2P13942 1736 aaPredicted RBP25.29■■□□□ 1.64
ATP6V0C-204ENST00000568562 CANXP27824 592 aaKnown RBP25.29■■□□□ 1.64
ATP6V0C-204ENST00000568562 JMYQ8N9B5 988 aa25.29■■□□□ 1.64
ATP6V0C-204ENST00000568562 SMC1BQ8NDV3 1235 aa25.29■■□□□ 1.64
ATP6V0C-204ENST00000568562 LMNB1P20700 586 aa25.28■■□□□ 1.64
ATP6V0C-204ENST00000568562 C2CD5Q86YS7 1000 aa25.28■■□□□ 1.64
ATP6V0C-204ENST00000568562 SIPA1L3O60292 1781 aaPredicted RBP25.28■■□□□ 1.64
ATP6V0C-204ENST00000568562 DICER1Q9UPY3 1922 aaKnown RBP25.27■■□□□ 1.64
ATP6V0C-204ENST00000568562 BICDL1Q6ZP65 573 aa25.27■■□□□ 1.64
ATP6V0C-204ENST00000568562 TTLL6Q8N841 843 aa25.27■■□□□ 1.64
ATP6V0C-204ENST00000568562 VSIG10Q8N0Z9 540 aa25.26■■□□□ 1.63
ATP6V0C-204ENST00000568562 FER1L6Q2WGJ9 1857 aa25.25■■□□□ 1.63
ATP6V0C-204ENST00000568562 GLTPD2A6NH11 291 aa25.24■■□□□ 1.63
ATP6V0C-204ENST00000568562 COL13A1Q5TAT6 717 aaPredicted RBP25.24■■□□□ 1.63
ATP6V0C-204ENST00000568562 H0YIN7 160 aa25.23■■□□□ 1.63
ATP6V0C-204ENST00000568562 NFKBIEO00221 500 aa25.23■■□□□ 1.63
ATP6V0C-204ENST00000568562 DIAPH1O60610 1272 aaKnown RBP25.23■■□□□ 1.63
ATP6V0C-204ENST00000568562 TTC5Q8N0Z6 440 aa25.23■■□□□ 1.63
ATP6V0C-204ENST00000568562 KIF7Q2M1P5 1343 aa25.22■■□□□ 1.63
ATP6V0C-204ENST00000568562 VEGFAP15692 232 aaPredicted RBP25.22■■□□□ 1.63
ATP6V0C-204ENST00000568562 STARD3NLO95772 234 aa25.21■■□□□ 1.63
ATP6V0C-204ENST00000568562 EIF5P55010 431 aaKnown RBP25.21■■□□□ 1.63
ATP6V0C-204ENST00000568562 CC2D1BQ5T0F9 858 aaKnown RBP25.21■■□□□ 1.63
ATP6V0C-204ENST00000568562 TBC1D9BQ66K14 1250 aa25.21■■□□□ 1.63
ATP6V0C-204ENST00000568562 ZNF330Q9Y3S2 320 aaPredicted RBP25.21■■□□□ 1.63
ATP6V0C-204ENST00000568562 BCORQ6W2J9 1755 aa25.21■■□□□ 1.63
ATP6V0C-204ENST00000568562 PCNTO95613 3336 aa25.2■■□□□ 1.63
ATP6V0C-204ENST00000568562 COL3A1P02461 1466 aaPredicted RBP25.2■■□□□ 1.62
ATP6V0C-204ENST00000568562 A0A087WZG4 1122 aa25.19■■□□□ 1.62
ATP6V0C-204ENST00000568562 CCDC24Q8N4L8 307 aa25.19■■□□□ 1.62
ATP6V0C-204ENST00000568562 ZNF622Q969S3 477 aaKnown RBP eCLIP25.19■■□□□ 1.62
ATP6V0C-204ENST00000568562 ZNF496Q96IT1 587 aaPredicted RBP25.19■■□□□ 1.62
ATP6V0C-204ENST00000568562 ZNF219Q9P2Y4 722 aaPredicted RBP25.19■■□□□ 1.62
ATP6V0C-204ENST00000568562 HEG1Q9ULI3 1381 aa25.18■■□□□ 1.62
ATP6V0C-204ENST00000568562 ARFGEF2Q9Y6D5 1785 aa25.18■■□□□ 1.62
ATP6V0C-204ENST00000568562 SLX4Q8IY92 1834 aa25.16■■□□□ 1.62
ATP6V0C-204ENST00000568562 TEFQ10587 303 aa25.16■■□□□ 1.62
ATP6V0C-204ENST00000568562 PRR5LQ6MZQ0 368 aa25.16■■□□□ 1.62
ATP6V0C-204ENST00000568562 TBC1D2BQ9UPU7 963 aa25.16■■□□□ 1.62
ATP6V0C-204ENST00000568562 U2SURPO15042 1029 aaKnown RBP25.15■■□□□ 1.62
ATP6V0C-204ENST00000568562 C21orf2O43822 256 aa25.15■■□□□ 1.62
ATP6V0C-204ENST00000568562 CAPN15O75808 1086 aa25.15■■□□□ 1.62
ATP6V0C-204ENST00000568562 ZNF790Q6PG37 636 aa25.15■■□□□ 1.62
ATP6V0C-204ENST00000568562 CCER1Q8TC90 406 aaPredicted RBP25.15■■□□□ 1.62
ATP6V0C-204ENST00000568562 POTECB2RU33 542 aa25.14■■□□□ 1.62
ATP6V0C-204ENST00000568562 PER1O15534 1290 aaPredicted RBP25.14■■□□□ 1.62
ATP6V0C-204ENST00000568562 PDE6BP35913 854 aa25.14■■□□□ 1.62
ATP6V0C-204ENST00000568562 CNGB1Q14028 1251 aaPredicted RBP25.14■■□□□ 1.62
ATP6V0C-204ENST00000568562 IL17REQ8NFR9 667 aa25.14■■□□□ 1.62
ATP6V0C-204ENST00000568562 GNAT3A8MTJ3 354 aa25.13■■□□□ 1.61
ATP6V0C-204ENST00000568562 BRIP1Q9BX63 1249 aa25.13■■□□□ 1.61
ATP6V0C-204ENST00000568562 HSPA1AP0DMV8 641 aaKnown RBP25.12■■□□□ 1.61
ATP6V0C-204ENST00000568562 HSPA1BP0DMV9 641 aaKnown RBP25.12■■□□□ 1.61
ATP6V0C-204ENST00000568562 ERFEQ4G0M1 354 aa25.12■■□□□ 1.61
ATP6V0C-204ENST00000568562 DPY19L2Q6NUT2 758 aa25.12■■□□□ 1.61
ATP6V0C-204ENST00000568562 TNS4Q8IZW8 715 aa25.12■■□□□ 1.61
ATP6V0C-204ENST00000568562 GAS2L2Q8NHY3 880 aa25.12■■□□□ 1.61
ATP6V0C-204ENST00000568562 IL6STP40189 918 aaPredicted RBP25.11■■□□□ 1.61
ATP6V0C-204ENST00000568562 TEX13AQ9BXU3 409 aaPredicted RBP25.11■■□□□ 1.61
ATP6V0C-204ENST00000568562 PDZRN3Q9UPQ7 1066 aa25.11■■□□□ 1.61
ATP6V0C-204ENST00000568562 A1BGP04217 495 aa25.1■■□□□ 1.61
ATP6V0C-204ENST00000568562 NPHP1O15259 732 aa25.09■■□□□ 1.61
ATP6V0C-204ENST00000568562 CNBD1Q8NA66 436 aa25.09■■□□□ 1.61
ATP6V0C-204ENST00000568562 FMNL2Q96PY5 1086 aa25.09■■□□□ 1.61
ATP6V0C-204ENST00000568562 TAOK3Q9H2K8 898 aa25.09■■□□□ 1.61
ATP6V0C-204ENST00000568562 CAMTA2O94983 1202 aa25.08■■□□□ 1.61
ATP6V0C-204ENST00000568562 NPM2Q86SE8 214 aaKnown RBP25.08■■□□□ 1.61
ATP6V0C-204ENST00000568562 SETDB2Q96T68 719 aa25.08■■□□□ 1.61
ATP6V0C-204ENST00000568562 KCNQ3O43525 872 aa25.07■■□□□ 1.6
ATP6V0C-204ENST00000568562 LTBP3Q9NS15 1303 aa25.07■■□□□ 1.6
ATP6V0C-204ENST00000568562 ST5P78524 1137 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms