RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 HTATSF1O43719 755 aaKnown RBP19.18■□□□□ 0.66
CMTM3-215ENST00000568477 MCM10Q7L590 875 aa19.18■□□□□ 0.66
CMTM3-215ENST00000568477 TEX13AQ9BXU3 409 aaPredicted RBP19.18■□□□□ 0.66
CMTM3-215ENST00000568477 GOLGB1Q14789 3259 aaKnown RBP19.18■□□□□ 0.66
CMTM3-215ENST00000568477 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
CMTM3-215ENST00000568477 USPL1Q5W0Q7 1092 aa19.16■□□□□ 0.66
CMTM3-215ENST00000568477 ZNF784Q8NCA9 323 aaPredicted RBP19.16■□□□□ 0.66
CMTM3-215ENST00000568477 NARFQ9UHQ1 456 aa19.16■□□□□ 0.66
CMTM3-215ENST00000568477 KIF13BQ9NQT8 1826 aa19.16■□□□□ 0.66
CMTM3-215ENST00000568477 PXDNLA1KZ92 1463 aa19.16■□□□□ 0.66
CMTM3-215ENST00000568477 KCNQ3O43525 872 aa19.15■□□□□ 0.66
CMTM3-215ENST00000568477 TGFB2P61812 414 aa19.15■□□□□ 0.66
CMTM3-215ENST00000568477 DCTN1Q14203 1278 aa19.15■□□□□ 0.66
CMTM3-215ENST00000568477 PNNQ9H307 717 aaKnown RBP19.15■□□□□ 0.66
CMTM3-215ENST00000568477 WWC3Q9ULE0 1092 aa19.15■□□□□ 0.66
CMTM3-215ENST00000568477 DDR1Q08345 913 aa19.14■□□□□ 0.65
CMTM3-215ENST00000568477 A0A087WZG4 1122 aa19.13■□□□□ 0.65
CMTM3-215ENST00000568477 EIF5P55010 431 aaKnown RBP19.13■□□□□ 0.65
CMTM3-215ENST00000568477 PLEKHF1Q96S99 279 aa19.13■□□□□ 0.65
CMTM3-215ENST00000568477 MYBBP1AQ9BQG0 1328 aaKnown RBP19.13■□□□□ 0.65
CMTM3-215ENST00000568477 MAPK8IP3Q9UPT6 1336 aa19.13■□□□□ 0.65
CMTM3-215ENST00000568477 POLRMTO00411 1230 aaKnown RBP19.12■□□□□ 0.65
CMTM3-215ENST00000568477 TM4SF1P30408 202 aa19.12■□□□□ 0.65
CMTM3-215ENST00000568477 NFE2L2Q16236 605 aa19.12■□□□□ 0.65
CMTM3-215ENST00000568477 KIAA1551Q9HCM1 1747 aa19.11■□□□□ 0.65
CMTM3-215ENST00000568477 A0A0G2JLW4 131 aa19.11■□□□□ 0.65
CMTM3-215ENST00000568477 TAF7Q15545 349 aaPredicted RBP19.11■□□□□ 0.65
CMTM3-215ENST00000568477 ZNF330Q9Y3S2 320 aaPredicted RBP19.11■□□□□ 0.65
CMTM3-215ENST00000568477 A1BGP04217 495 aa19.1■□□□□ 0.65
CMTM3-215ENST00000568477 DPEP1P16444 411 aa19.1■□□□□ 0.65
CMTM3-215ENST00000568477 IL6STP40189 918 aaPredicted RBP19.1■□□□□ 0.65
CMTM3-215ENST00000568477 NFIXQ14938 502 aa19.1■□□□□ 0.65
CMTM3-215ENST00000568477 NPM2Q86SE8 214 aaKnown RBP19.1■□□□□ 0.65
CMTM3-215ENST00000568477 BCL2L12Q9HB09 334 aa19.1■□□□□ 0.65
CMTM3-215ENST00000568477 N4BP2Q86UW6 1770 aaPredicted RBP19.09■□□□□ 0.65
CMTM3-215ENST00000568477 SNRPA1P09661 255 aaKnown RBP19.09■□□□□ 0.65
CMTM3-215ENST00000568477 DLG5Q8TDM6 1919 aa19.08■□□□□ 0.65
CMTM3-215ENST00000568477 PNISRQ8TF01 805 aaKnown RBP19.08■□□□□ 0.64
CMTM3-215ENST00000568477 BCS1LQ9Y276 419 aa19.08■□□□□ 0.64
CMTM3-215ENST00000568477 USP16Q9Y5T5 823 aa19.08■□□□□ 0.64
CMTM3-215ENST00000568477 PRAMEF22A3QJZ6 481 aa19.06■□□□□ 0.64
CMTM3-215ENST00000568477 MIS18AQ9NYP9 233 aa19.06■□□□□ 0.64
CMTM3-215ENST00000568477 TBC1D2BQ9UPU7 963 aa19.06■□□□□ 0.64
CMTM3-215ENST00000568477 SCN7AQ01118 1682 aa19.05■□□□□ 0.64
CMTM3-215ENST00000568477 SERPINB2P05120 415 aa19.05■□□□□ 0.64
CMTM3-215ENST00000568477 PIM2Q9P1W9 311 aa19.05■□□□□ 0.64
CMTM3-215ENST00000568477 KCNA3P22001 575 aa19.04■□□□□ 0.64
CMTM3-215ENST00000568477 BICDL1Q6ZP65 573 aa19.04■□□□□ 0.64
CMTM3-215ENST00000568477 THUMPD2Q9BTF0 503 aaKnown RBP19.04■□□□□ 0.64
CMTM3-215ENST00000568477 CHRNA5P30532 468 aa19.03■□□□□ 0.64
CMTM3-215ENST00000568477 PIP4K2AP48426 406 aaPredicted RBP19.03■□□□□ 0.64
CMTM3-215ENST00000568477 WDR43Q15061 677 aaKnown RBP eCLIP19.03■□□□□ 0.64
CMTM3-215ENST00000568477 TBC1D9BQ66K14 1250 aa19.03■□□□□ 0.64
CMTM3-215ENST00000568477 DZIP3Q86Y13 1208 aaKnown RBP19.03■□□□□ 0.64
CMTM3-215ENST00000568477 BRCA1P38398 1863 aaKnown RBP19.03■□□□□ 0.64
CMTM3-215ENST00000568477 NRXN2Q9P2S2 1712 aa19.03■□□□□ 0.64
CMTM3-215ENST00000568477 AFDNP55196 1824 aaKnown RBP19.02■□□□□ 0.64
CMTM3-215ENST00000568477 ATP10DQ9P241 1426 aa19.02■□□□□ 0.64
CMTM3-215ENST00000568477 CAMTA2O94983 1202 aa19.02■□□□□ 0.64
CMTM3-215ENST00000568477 DALRD3Q5D0E6 543 aaKnown RBP19.02■□□□□ 0.64
CMTM3-215ENST00000568477 PRKRIP1Q9H875 184 aaPredicted RBP19.02■□□□□ 0.64
CMTM3-215ENST00000568477 KDM3BQ7LBC6 1761 aa19.01■□□□□ 0.63
CMTM3-215ENST00000568477 RIPK4P57078 832 aa19.01■□□□□ 0.63
CMTM3-215ENST00000568477 LMOD3Q0VAK6 560 aa19.01■□□□□ 0.63
CMTM3-215ENST00000568477 ADCY9O60503 1353 aa19.01■□□□□ 0.63
CMTM3-215ENST00000568477 TMPOP42166 694 aaKnown RBP19■□□□□ 0.63
CMTM3-215ENST00000568477 ARHGAP27Q6ZUM4 889 aa19■□□□□ 0.63
CMTM3-215ENST00000568477 CARMIL3Q8ND23 1372 aa19■□□□□ 0.63
CMTM3-215ENST00000568477 NBPF26B4DH59 902 aa18.99■□□□□ 0.63
CMTM3-215ENST00000568477 EIF4A1P60842 406 aaKnown RBP18.99■□□□□ 0.63
CMTM3-215ENST00000568477 NBPF10Q6P3W6 841 aaKnown RBP18.99■□□□□ 0.63
CMTM3-215ENST00000568477 CCDC146Q8IYE0 955 aa18.99■□□□□ 0.63
CMTM3-215ENST00000568477 NBPF15Q8N660 670 aa18.99■□□□□ 0.63
CMTM3-215ENST00000568477 SETDB2Q96T68 719 aa18.99■□□□□ 0.63
CMTM3-215ENST00000568477 LAMB4A4D0S4 1761 aa18.98■□□□□ 0.63
CMTM3-215ENST00000568477 BCORQ6W2J9 1755 aa18.98■□□□□ 0.63
CMTM3-215ENST00000568477 ARFGEF1Q9Y6D6 1849 aa18.98■□□□□ 0.63
CMTM3-215ENST00000568477 GIGYF1O75420 1035 aaPredicted RBP18.98■□□□□ 0.63
CMTM3-215ENST00000568477 TSPYL4Q9UJ04 414 aa18.98■□□□□ 0.63
CMTM3-215ENST00000568477 ZNF652Q9Y2D9 606 aa18.98■□□□□ 0.63
CMTM3-215ENST00000568477 CLEC4GQ6UXB4 293 aa18.97■□□□□ 0.63
CMTM3-215ENST00000568477 C2CD5Q86YS7 1000 aa18.97■□□□□ 0.63
CMTM3-215ENST00000568477 RUNDC1Q96C34 613 aa18.97■□□□□ 0.63
CMTM3-215ENST00000568477 RRP7AQ9Y3A4 280 aaKnown RBP18.97■□□□□ 0.63
CMTM3-215ENST00000568477 H0YIN7 160 aa18.96■□□□□ 0.63
CMTM3-215ENST00000568477 RGL2O15211 777 aa18.96■□□□□ 0.63
CMTM3-215ENST00000568477 NPHP1O15259 732 aa18.96■□□□□ 0.63
CMTM3-215ENST00000568477 PRR5LQ6MZQ0 368 aa18.96■□□□□ 0.63
CMTM3-215ENST00000568477 NEUROD2Q15784 382 aa18.95■□□□□ 0.62
CMTM3-215ENST00000568477 CNBD1Q8NA66 436 aa18.95■□□□□ 0.62
CMTM3-215ENST00000568477 GPBP1L1Q9HC44 474 aaPredicted RBP18.95■□□□□ 0.62
CMTM3-215ENST00000568477 BABAM1Q9NWV8 329 aa18.95■□□□□ 0.62
CMTM3-215ENST00000568477 ADAMTS8Q9UP79 889 aa18.95■□□□□ 0.62
CMTM3-215ENST00000568477 PDZRN3Q9UPQ7 1066 aa18.95■□□□□ 0.62
CMTM3-215ENST00000568477 PDE6BP35913 854 aa18.94■□□□□ 0.62
CMTM3-215ENST00000568477 ZNF526Q8TF50 670 aaPredicted RBP18.94■□□□□ 0.62
CMTM3-215ENST00000568477 BRIP1Q9BX63 1249 aa18.94■□□□□ 0.62
CMTM3-215ENST00000568477 DLEC1Q9Y238 1755 aa18.93■□□□□ 0.62
CMTM3-215ENST00000568477 C1QTNF8P60827 252 aa18.93■□□□□ 0.62
CMTM3-215ENST00000568477 ST5P78524 1137 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms