RNA–Protein interactions for RNA: ENST00000568339.5

COX4I1-215, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 2

Gene COX4I1, Length 2,271 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-215ENST00000568339 HYPKQ9NX55 129 aa20.81■□□□□ 0.92
COX4I1-215ENST00000568339 ADCY9O60503 1353 aa20.81■□□□□ 0.92
COX4I1-215ENST00000568339 GLI3P10071 1580 aa20.81■□□□□ 0.92
COX4I1-215ENST00000568339 SRCIN1Q9C0H9 1055 aa20.81■□□□□ 0.92
COX4I1-215ENST00000568339 LAMB4A4D0S4 1761 aa20.8■□□□□ 0.92
COX4I1-215ENST00000568339 IL2RBP14784 551 aa20.8■□□□□ 0.92
COX4I1-215ENST00000568339 PAPPAQ13219 1627 aa20.8■□□□□ 0.92
COX4I1-215ENST00000568339 BEND3Q5T5X7 828 aa20.8■□□□□ 0.92
COX4I1-215ENST00000568339 DDX21Q9NR30 783 aaKnown RBP eCLIP20.8■□□□□ 0.92
COX4I1-215ENST00000568339 IBTKQ9P2D0 1353 aaPredicted RBP20.8■□□□□ 0.92
COX4I1-215ENST00000568339 UBR2Q8IWV8 1755 aa20.8■□□□□ 0.92
COX4I1-215ENST00000568339 PI4KAP2A4QPH2 592 aa20.79■□□□□ 0.92
COX4I1-215ENST00000568339 ATP8B2P98198 1209 aa20.79■□□□□ 0.92
COX4I1-215ENST00000568339 PI4KAP1Q8N8J0 262 aa20.79■□□□□ 0.92
COX4I1-215ENST00000568339 COL16A1Q07092 1604 aaPredicted RBP20.78■□□□□ 0.92
COX4I1-215ENST00000568339 PRAMEF22A3QJZ6 481 aa20.78■□□□□ 0.92
COX4I1-215ENST00000568339 SLC39A6Q13433 755 aa20.78■□□□□ 0.92
COX4I1-215ENST00000568339 LARP1Q6PKG0 1096 aaKnown RBP20.78■□□□□ 0.92
COX4I1-215ENST00000568339 ERVV-2B6SEH9 535 aa20.78■□□□□ 0.92
COX4I1-215ENST00000568339 PDIA6Q15084 440 aa20.78■□□□□ 0.92
COX4I1-215ENST00000568339 PLCH1Q4KWH8 1693 aa20.77■□□□□ 0.92
COX4I1-215ENST00000568339 CABP4P57796 275 aa20.77■□□□□ 0.92
COX4I1-215ENST00000568339 EVA1CP58658 441 aa20.77■□□□□ 0.92
COX4I1-215ENST00000568339 KSR2Q6VAB6 950 aa20.77■□□□□ 0.92
COX4I1-215ENST00000568339 PROSER3Q2NL68 480 aa20.76■□□□□ 0.91
COX4I1-215ENST00000568339 UPF2Q9HAU5 1272 aaKnown RBP20.76■□□□□ 0.91
COX4I1-215ENST00000568339 UBTFL1P0CB47 393 aaPredicted RBP20.76■□□□□ 0.91
COX4I1-215ENST00000568339 ZNF496Q96IT1 587 aaPredicted RBP20.76■□□□□ 0.91
COX4I1-215ENST00000568339 ALDH1L1O75891 902 aa20.75■□□□□ 0.91
COX4I1-215ENST00000568339 ANXA1P04083 346 aa20.75■□□□□ 0.91
COX4I1-215ENST00000568339 SNRPA1P09661 255 aaKnown RBP20.75■□□□□ 0.91
COX4I1-215ENST00000568339 PLEKHM2Q8IWE5 1019 aa20.75■□□□□ 0.91
COX4I1-215ENST00000568339 TTC5Q8N0Z6 440 aa20.75■□□□□ 0.91
COX4I1-215ENST00000568339 FMNL2Q96PY5 1086 aa20.75■□□□□ 0.91
COX4I1-215ENST00000568339 RRAGDQ9NQL2 400 aaPredicted RBP20.75■□□□□ 0.91
COX4I1-215ENST00000568339 LRRFIP2Q9Y608 721 aaKnown RBP20.75■□□□□ 0.91
COX4I1-215ENST00000568339 TBC1D32Q96NH3 1257 aa20.74■□□□□ 0.91
COX4I1-215ENST00000568339 STRN4Q9NRL3 753 aa20.74■□□□□ 0.91
COX4I1-215ENST00000568339 DDX58O95786 925 aaKnown RBP20.73■□□□□ 0.91
COX4I1-215ENST00000568339 SSH3Q8TE77 659 aa20.73■□□□□ 0.91
COX4I1-215ENST00000568339 MAP3K2Q9Y2U5 619 aa20.73■□□□□ 0.91
COX4I1-215ENST00000568339 DISP2A7MBM2 1401 aa20.72■□□□□ 0.91
COX4I1-215ENST00000568339 PHLPP1O60346 1717 aa20.72■□□□□ 0.91
COX4I1-215ENST00000568339 WNK3Q9BYP7 1800 aa20.72■□□□□ 0.91
COX4I1-215ENST00000568339 TOGARAM1Q9Y4F4 1720 aa20.72■□□□□ 0.91
COX4I1-215ENST00000568339 BTG4Q9NY30 223 aa20.72■□□□□ 0.91
COX4I1-215ENST00000568339 PNMA6EA0A0J9YXQ4 647 aa20.71■□□□□ 0.91
COX4I1-215ENST00000568339 KCPQ6ZWJ8 1503 aa20.71■□□□□ 0.91
COX4I1-215ENST00000568339 POLA2Q14181 598 aa20.71■□□□□ 0.91
COX4I1-215ENST00000568339 LRP10Q7Z4F1 713 aa20.71■□□□□ 0.91
COX4I1-215ENST00000568339 TNS2Q63HR2 1409 aa20.7■□□□□ 0.91
COX4I1-215ENST00000568339 ERBB4Q15303 1308 aa20.7■□□□□ 0.9
COX4I1-215ENST00000568339 TTC22Q5TAA0 569 aa20.7■□□□□ 0.9
COX4I1-215ENST00000568339 LINS1Q8NG48 757 aa20.7■□□□□ 0.9
COX4I1-215ENST00000568339 OSBPL3Q9H4L5 887 aa20.7■□□□□ 0.9
COX4I1-215ENST00000568339 HDAC5Q9UQL6 1122 aa20.7■□□□□ 0.9
COX4I1-215ENST00000568339 UTYO14607 1347 aa20.69■□□□□ 0.9
COX4I1-215ENST00000568339 NBPF7P0C2Y1 421 aaPredicted RBP20.69■□□□□ 0.9
COX4I1-215ENST00000568339 USP16Q9Y5T5 823 aa20.69■□□□□ 0.9
COX4I1-215ENST00000568339 LRP6O75581 1613 aa20.68■□□□□ 0.9
COX4I1-215ENST00000568339 MTX1Q13505 466 aa20.68■□□□□ 0.9
COX4I1-215ENST00000568339 GSPT1P15170 499 aaKnown RBP20.67■□□□□ 0.9
COX4I1-215ENST00000568339 C16orf71Q8IYS4 520 aaPredicted RBP20.67■□□□□ 0.9
COX4I1-215ENST00000568339 NRAPQ86VF7 1730 aa20.67■□□□□ 0.9
COX4I1-215ENST00000568339 TUBGCP6Q96RT7 1819 aa20.67■□□□□ 0.9
COX4I1-215ENST00000568339 SMARCA5O60264 1052 aaPredicted RBP20.66■□□□□ 0.9
COX4I1-215ENST00000568339 LRRCC1Q9C099 1032 aa20.66■□□□□ 0.9
COX4I1-215ENST00000568339 ANTXR1Q9H6X2 564 aa20.66■□□□□ 0.9
COX4I1-215ENST00000568339 SALL3Q9BXA9 1300 aa20.66■□□□□ 0.9
COX4I1-215ENST00000568339 L1TD1Q5T7N2 865 aaKnown RBP20.66■□□□□ 0.9
COX4I1-215ENST00000568339 PPP1R42Q7Z4L9 355 aa20.66■□□□□ 0.9
COX4I1-215ENST00000568339 EXOC6BQ9Y2D4 811 aa20.66■□□□□ 0.9
COX4I1-215ENST00000568339 ARFGEF2Q9Y6D5 1785 aa20.65■□□□□ 0.9
COX4I1-215ENST00000568339 RAB11FIP3O75154 756 aa20.65■□□□□ 0.9
COX4I1-215ENST00000568339 DDX54Q8TDD1 881 aaKnown RBP20.65■□□□□ 0.9
COX4I1-215ENST00000568339 OTUD7AQ8TE49 926 aaPredicted RBP20.65■□□□□ 0.9
COX4I1-215ENST00000568339 XAGE3Q8WTP9 111 aa20.65■□□□□ 0.9
COX4I1-215ENST00000568339 C22orf23Q9BZE7 217 aa20.65■□□□□ 0.9
COX4I1-215ENST00000568339 CDC45O75419 566 aa20.64■□□□□ 0.89
COX4I1-215ENST00000568339 COPS6Q7L5N1 327 aa20.64■□□□□ 0.89
COX4I1-215ENST00000568339 ITGB4P16144 1822 aa20.63■□□□□ 0.89
COX4I1-215ENST00000568339 MFAP1P55081 439 aaKnown RBP20.63■□□□□ 0.89
COX4I1-215ENST00000568339 TBC1D9Q6ZT07 1266 aa20.63■□□□□ 0.89
COX4I1-215ENST00000568339 RIC3Q7Z5B4 369 aa20.63■□□□□ 0.89
COX4I1-215ENST00000568339 METTL22Q9BUU2 404 aaPredicted RBP20.63■□□□□ 0.89
COX4I1-215ENST00000568339 MYL6BP14649 208 aa20.62■□□□□ 0.89
COX4I1-215ENST00000568339 RBM25P49756 843 aaKnown RBP20.62■□□□□ 0.89
COX4I1-215ENST00000568339 AIMP1Q12904 312 aaKnown RBP20.62■□□□□ 0.89
COX4I1-215ENST00000568339 C9orf78Q9NZ63 289 aaPredicted RBP20.62■□□□□ 0.89
COX4I1-215ENST00000568339 GRM8O00222 908 aa20.62■□□□□ 0.89
COX4I1-215ENST00000568339 PDE1AP54750 535 aa20.62■□□□□ 0.89
COX4I1-215ENST00000568339 CWF19L2Q2TBE0 894 aaKnown RBP20.62■□□□□ 0.89
COX4I1-215ENST00000568339 NWD2Q9ULI1 1742 aa20.62■□□□□ 0.89
COX4I1-215ENST00000568339 APBB1O00213 710 aa20.61■□□□□ 0.89
COX4I1-215ENST00000568339 SRGAP3O43295 1099 aa20.61■□□□□ 0.89
COX4I1-215ENST00000568339 IGKV5-2P06315 115 aa20.61■□□□□ 0.89
COX4I1-215ENST00000568339 NEXNQ0ZGT2 675 aa20.61■□□□□ 0.89
COX4I1-215ENST00000568339 BECN1Q14457 450 aa20.61■□□□□ 0.89
COX4I1-215ENST00000568339 ANKRD13DQ6ZTN6 518 aa20.61■□□□□ 0.89
COX4I1-215ENST00000568339 NUP188Q5SRE5 1749 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms