RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 PLEKHF1Q96S99 279 aa14.61□□□□□ -0.07
LINC01228-201ENST00000567966 ADAMTS8Q9UP79 889 aa14.61□□□□□ -0.07
LINC01228-201ENST00000567966 RNMTO43148 476 aaKnown RBP14.6□□□□□ -0.07
LINC01228-201ENST00000567966 HTATSF1O43719 755 aaKnown RBP14.6□□□□□ -0.07
LINC01228-201ENST00000567966 PHACTR3Q96KR7 559 aa14.6□□□□□ -0.07
LINC01228-201ENST00000567966 SLC52A2Q9HAB3 445 aa14.6□□□□□ -0.07
LINC01228-201ENST00000567966 ADAMTS7Q9UKP4 1686 aa14.59□□□□□ -0.07
LINC01228-201ENST00000567966 KIAA1551Q9HCM1 1747 aa14.59□□□□□ -0.07
LINC01228-201ENST00000567966 GRIN3BO60391 1043 aa14.59□□□□□ -0.07
LINC01228-201ENST00000567966 CRKLP46109 303 aaKnown RBP14.59□□□□□ -0.07
LINC01228-201ENST00000567966 SLC39A6Q13433 755 aa14.59□□□□□ -0.07
LINC01228-201ENST00000567966 CICQ96RK0 1608 aaPredicted RBP14.59□□□□□ -0.07
LINC01228-201ENST00000567966 MRC1P22897 1456 aa14.58□□□□□ -0.08
LINC01228-201ENST00000567966 N4BP2Q86UW6 1770 aaPredicted RBP14.58□□□□□ -0.08
LINC01228-201ENST00000567966 GNAT3A8MTJ3 354 aa14.58□□□□□ -0.08
LINC01228-201ENST00000567966 GYS1P13807 737 aa14.58□□□□□ -0.08
LINC01228-201ENST00000567966 RUNDC1Q96C34 613 aa14.58□□□□□ -0.08
LINC01228-201ENST00000567966 KIF13BQ9NQT8 1826 aa14.57□□□□□ -0.08
LINC01228-201ENST00000567966 RFC4P35249 363 aa14.57□□□□□ -0.08
LINC01228-201ENST00000567966 CCDC184Q52MB2 194 aa14.57□□□□□ -0.08
LINC01228-201ENST00000567966 INTS5Q6P9B9 1019 aaKnown RBP14.57□□□□□ -0.08
LINC01228-201ENST00000567966 DNAJC10Q8IXB1 793 aa14.57□□□□□ -0.08
LINC01228-201ENST00000567966 SRP68Q9UHB9 627 aaKnown RBP14.57□□□□□ -0.08
LINC01228-201ENST00000567966 MAPK8IP3Q9UPT6 1336 aa14.57□□□□□ -0.08
LINC01228-201ENST00000567966 KCPQ6ZWJ8 1503 aa14.56□□□□□ -0.08
LINC01228-201ENST00000567966 NLGN1Q8N2Q7 840 aa14.56□□□□□ -0.08
LINC01228-201ENST00000567966 NFE2L2Q16236 605 aa14.55□□□□□ -0.08
LINC01228-201ENST00000567966 PXDNLA1KZ92 1463 aa14.55□□□□□ -0.08
LINC01228-201ENST00000567966 CYP19A1P11511 503 aaPredicted RBP14.54□□□□□ -0.08
LINC01228-201ENST00000567966 FKBP8Q14318 412 aa14.54□□□□□ -0.08
LINC01228-201ENST00000567966 RTF1Q92541 710 aaKnown RBP14.54□□□□□ -0.08
LINC01228-201ENST00000567966 UBR2Q8IWV8 1755 aa14.53□□□□□ -0.08
LINC01228-201ENST00000567966 C10orf71Q711Q0 1435 aa14.53□□□□□ -0.08
LINC01228-201ENST00000567966 USP42Q9H9J4 1324 aaKnown RBP14.53□□□□□ -0.08
LINC01228-201ENST00000567966 A0A0G2JLW4 131 aa14.53□□□□□ -0.08
LINC01228-201ENST00000567966 LMOD3Q0VAK6 560 aa14.53□□□□□ -0.08
LINC01228-201ENST00000567966 NGEFQ8N5V2 710 aa14.53□□□□□ -0.08
LINC01228-201ENST00000567966 IL17REQ8NFR9 667 aa14.53□□□□□ -0.08
LINC01228-201ENST00000567966 CCDC87Q9NVE4 849 aa14.53□□□□□ -0.08
LINC01228-201ENST00000567966 TMPOP42166 694 aaKnown RBP14.52□□□□□ -0.09
LINC01228-201ENST00000567966 C1QTNF8P60827 252 aa14.52□□□□□ -0.09
LINC01228-201ENST00000567966 DDR1Q08345 913 aa14.52□□□□□ -0.09
LINC01228-201ENST00000567966 SIPA1L3O60292 1781 aaPredicted RBP14.52□□□□□ -0.09
LINC01228-201ENST00000567966 ATP10DQ9P241 1426 aa14.51□□□□□ -0.09
LINC01228-201ENST00000567966 SOS1Q07889 1333 aaPredicted RBP14.51□□□□□ -0.09
LINC01228-201ENST00000567966 RIPK4P57078 832 aa14.51□□□□□ -0.09
LINC01228-201ENST00000567966 PARP3Q9Y6F1 533 aa14.51□□□□□ -0.09
LINC01228-201ENST00000567966 BRCA1P38398 1863 aaKnown RBP14.5□□□□□ -0.09
LINC01228-201ENST00000567966 DPEP1P16444 411 aa14.5□□□□□ -0.09
LINC01228-201ENST00000567966 KCNA3P22001 575 aa14.5□□□□□ -0.09
LINC01228-201ENST00000567966 TGFB2P61812 414 aa14.5□□□□□ -0.09
LINC01228-201ENST00000567966 USPL1Q5W0Q7 1092 aa14.5□□□□□ -0.09
LINC01228-201ENST00000567966 ZBTB1Q9Y2K1 713 aa14.5□□□□□ -0.09
LINC01228-201ENST00000567966 CEMIPQ8WUJ3 1361 aa14.49□□□□□ -0.09
LINC01228-201ENST00000567966 GIGYF1O75420 1035 aaPredicted RBP14.49□□□□□ -0.09
LINC01228-201ENST00000567966 TM4SF1P30408 202 aa14.49□□□□□ -0.09
LINC01228-201ENST00000567966 TEFQ10587 303 aa14.49□□□□□ -0.09
LINC01228-201ENST00000567966 BCS1LQ9Y276 419 aa14.49□□□□□ -0.09
LINC01228-201ENST00000567966 ADCY9O60503 1353 aa14.48□□□□□ -0.09
LINC01228-201ENST00000567966 APAF1O14727 1248 aa14.48□□□□□ -0.09
LINC01228-201ENST00000567966 CCDC27Q2M243 656 aa14.48□□□□□ -0.09
LINC01228-201ENST00000567966 CCDC146Q8IYE0 955 aa14.48□□□□□ -0.09
LINC01228-201ENST00000567966 FAM9BQ8IZU0 186 aa14.48□□□□□ -0.09
LINC01228-201ENST00000567966 ZNF526Q8TF50 670 aaPredicted RBP14.48□□□□□ -0.09
LINC01228-201ENST00000567966 ZNF496Q96IT1 587 aaPredicted RBP14.48□□□□□ -0.09
LINC01228-201ENST00000567966 BABAM1Q9NWV8 329 aa14.48□□□□□ -0.09
LINC01228-201ENST00000567966 COL15A1P39059 1388 aa14.47□□□□□ -0.09
LINC01228-201ENST00000567966 POLRMTO00411 1230 aaKnown RBP14.47□□□□□ -0.09
LINC01228-201ENST00000567966 KCNQ3O43525 872 aa14.47□□□□□ -0.09
LINC01228-201ENST00000567966 CANXP27824 592 aaKnown RBP14.47□□□□□ -0.09
LINC01228-201ENST00000567966 CALD1Q05682 793 aaKnown RBP14.47□□□□□ -0.09
LINC01228-201ENST00000567966 TAF7Q15545 349 aaPredicted RBP14.47□□□□□ -0.09
LINC01228-201ENST00000567966 VSIG10Q8N0Z9 540 aa14.47□□□□□ -0.09
LINC01228-201ENST00000567966 BCL2L12Q9HB09 334 aa14.47□□□□□ -0.09
LINC01228-201ENST00000567966 AFDNP55196 1824 aaKnown RBP14.47□□□□□ -0.09
LINC01228-201ENST00000567966 ZPR1O75312 459 aa14.46□□□□□ -0.09
LINC01228-201ENST00000567966 ZNF790Q6PG37 636 aa14.46□□□□□ -0.09
LINC01228-201ENST00000567966 TTC5Q8N0Z6 440 aa14.46□□□□□ -0.09
LINC01228-201ENST00000567966 HEG1Q9ULI3 1381 aa14.46□□□□□ -0.1
LINC01228-201ENST00000567966 SENP3-EIF4A1A0A087X0R7 540 aa14.45□□□□□ -0.1
LINC01228-201ENST00000567966 CHRNA5P30532 468 aa14.45□□□□□ -0.1
LINC01228-201ENST00000567966 NFIXQ14938 502 aa14.45□□□□□ -0.1
LINC01228-201ENST00000567966 MCM10Q7L590 875 aa14.45□□□□□ -0.1
LINC01228-201ENST00000567966 NARFQ9UHQ1 456 aa14.45□□□□□ -0.1
LINC01228-201ENST00000567966 NEUROD2Q15784 382 aa14.44□□□□□ -0.1
LINC01228-201ENST00000567966 ARHGAP27Q6ZUM4 889 aa14.44□□□□□ -0.1
LINC01228-201ENST00000567966 TRIM35Q9UPQ4 493 aa14.44□□□□□ -0.1
LINC01228-201ENST00000567966 NRXN2Q9P2S2 1712 aa14.44□□□□□ -0.1
LINC01228-201ENST00000567966 ARFGEF1Q9Y6D6 1849 aa14.43□□□□□ -0.1
LINC01228-201ENST00000567966 STARD3NLO95772 234 aa14.43□□□□□ -0.1
LINC01228-201ENST00000567966 A1BGP04217 495 aa14.43□□□□□ -0.1
LINC01228-201ENST00000567966 EIF5P55010 431 aaKnown RBP14.43□□□□□ -0.1
LINC01228-201ENST00000567966 DCTN1Q14203 1278 aa14.43□□□□□ -0.1
LINC01228-201ENST00000567966 YTHDC1Q96MU7 727 aaKnown RBP14.43□□□□□ -0.1
LINC01228-201ENST00000567966 GPBP1L1Q9HC44 474 aaPredicted RBP14.43□□□□□ -0.1
LINC01228-201ENST00000567966 PRAMEF22A3QJZ6 481 aa14.42□□□□□ -0.1
LINC01228-201ENST00000567966 BTBD11A6QL63 1104 aa14.42□□□□□ -0.1
LINC01228-201ENST00000567966 PIM2Q9P1W9 311 aa14.42□□□□□ -0.1
LINC01228-201ENST00000567966 RRP7AQ9Y3A4 280 aaKnown RBP14.42□□□□□ -0.1
LINC01228-201ENST00000567966 SERPINB2P05120 415 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms