RNA–Protein interactions for RNA: ENST00000567890.1

NR4A1-222, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 612 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-222ENST00000567890 COL15A1P39059 1388 aa16.22■□□□□ 0.19
NR4A1-222ENST00000567890 CEMIPQ8WUJ3 1361 aa16.22■□□□□ 0.19
NR4A1-222ENST00000567890 A0A087WZG4 1122 aa16.21■□□□□ 0.19
NR4A1-222ENST00000567890 USPL1Q5W0Q7 1092 aa16.21■□□□□ 0.19
NR4A1-222ENST00000567890 PNNQ9H307 717 aaKnown RBP16.21■□□□□ 0.19
NR4A1-222ENST00000567890 VIRMAQ69YN4 1812 aaKnown RBP16.21■□□□□ 0.19
NR4A1-222ENST00000567890 A0A0G2JLW4 131 aa16.2■□□□□ 0.18
NR4A1-222ENST00000567890 ZNF496Q96IT1 587 aaPredicted RBP16.2■□□□□ 0.18
NR4A1-222ENST00000567890 FMNL2Q96PY5 1086 aa16.2■□□□□ 0.18
NR4A1-222ENST00000567890 NARFQ9UHQ1 456 aa16.2■□□□□ 0.18
NR4A1-222ENST00000567890 HEG1Q9ULI3 1381 aa16.19■□□□□ 0.18
NR4A1-222ENST00000567890 BTBD11A6QL63 1104 aa16.19■□□□□ 0.18
NR4A1-222ENST00000567890 DPEP1P16444 411 aa16.19■□□□□ 0.18
NR4A1-222ENST00000567890 CANXP27824 592 aaKnown RBP16.19■□□□□ 0.18
NR4A1-222ENST00000567890 DDR1Q08345 913 aa16.19■□□□□ 0.18
NR4A1-222ENST00000567890 NPM2Q86SE8 214 aaKnown RBP16.19■□□□□ 0.18
NR4A1-222ENST00000567890 BCS1LQ9Y276 419 aa16.19■□□□□ 0.18
NR4A1-222ENST00000567890 GIGYF1O75420 1035 aaPredicted RBP16.18■□□□□ 0.18
NR4A1-222ENST00000567890 ATP10DQ9P241 1426 aa16.18■□□□□ 0.18
NR4A1-222ENST00000567890 UBR2Q8IWV8 1755 aa16.18■□□□□ 0.18
NR4A1-222ENST00000567890 KIF13BQ9NQT8 1826 aa16.17■□□□□ 0.18
NR4A1-222ENST00000567890 POLRMTO00411 1230 aaKnown RBP16.17■□□□□ 0.18
NR4A1-222ENST00000567890 TM4SF1P30408 202 aa16.16■□□□□ 0.18
NR4A1-222ENST00000567890 RALBP1Q15311 655 aa16.16■□□□□ 0.18
NR4A1-222ENST00000567890 MCM10Q7L590 875 aa16.16■□□□□ 0.18
NR4A1-222ENST00000567890 ZNF330Q9Y3S2 320 aaPredicted RBP16.16■□□□□ 0.18
NR4A1-222ENST00000567890 IL6STP40189 918 aaPredicted RBP16.15■□□□□ 0.18
NR4A1-222ENST00000567890 EIF5P55010 431 aaKnown RBP16.15■□□□□ 0.18
NR4A1-222ENST00000567890 C1QTNF8P60827 252 aa16.15■□□□□ 0.18
NR4A1-222ENST00000567890 NFIXQ14938 502 aa16.15■□□□□ 0.18
NR4A1-222ENST00000567890 PIM2Q9P1W9 311 aa16.15■□□□□ 0.18
NR4A1-222ENST00000567890 N4BP2Q86UW6 1770 aaPredicted RBP16.15■□□□□ 0.18
NR4A1-222ENST00000567890 KIAA1551Q9HCM1 1747 aa16.14■□□□□ 0.17
NR4A1-222ENST00000567890 SIPA1L3O60292 1781 aaPredicted RBP16.14■□□□□ 0.17
NR4A1-222ENST00000567890 KCNQ3O43525 872 aa16.14■□□□□ 0.17
NR4A1-222ENST00000567890 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
NR4A1-222ENST00000567890 GPBP1L1Q9HC44 474 aaPredicted RBP16.14■□□□□ 0.17
NR4A1-222ENST00000567890 ADCY9O60503 1353 aa16.13■□□□□ 0.17
NR4A1-222ENST00000567890 DCTN1Q14203 1278 aa16.13■□□□□ 0.17
NR4A1-222ENST00000567890 ARHGAP27Q6ZUM4 889 aa16.13■□□□□ 0.17
NR4A1-222ENST00000567890 PNISRQ8TF01 805 aaKnown RBP16.13■□□□□ 0.17
NR4A1-222ENST00000567890 ZNF526Q8TF50 670 aaPredicted RBP16.13■□□□□ 0.17
NR4A1-222ENST00000567890 PDZRN3Q9UPQ7 1066 aa16.13■□□□□ 0.17
NR4A1-222ENST00000567890 RGL2O15211 777 aa16.12■□□□□ 0.17
NR4A1-222ENST00000567890 SERPINB2P05120 415 aa16.12■□□□□ 0.17
NR4A1-222ENST00000567890 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
NR4A1-222ENST00000567890 KCNA3P22001 575 aa16.12■□□□□ 0.17
NR4A1-222ENST00000567890 DALRD3Q5D0E6 543 aaKnown RBP16.12■□□□□ 0.17
NR4A1-222ENST00000567890 BICDL1Q6ZP65 573 aa16.12■□□□□ 0.17
NR4A1-222ENST00000567890 BCL2L12Q9HB09 334 aa16.12■□□□□ 0.17
NR4A1-222ENST00000567890 A1BGP04217 495 aa16.11■□□□□ 0.17
NR4A1-222ENST00000567890 CHRNA5P30532 468 aa16.11■□□□□ 0.17
NR4A1-222ENST00000567890 TAF7Q15545 349 aaPredicted RBP16.11■□□□□ 0.17
NR4A1-222ENST00000567890 TBC1D2BQ9UPU7 963 aa16.11■□□□□ 0.17
NR4A1-222ENST00000567890 MAPK8IP3Q9UPT6 1336 aa16.11■□□□□ 0.17
NR4A1-222ENST00000567890 SENP3-EIF4A1A0A087X0R7 540 aa16.1■□□□□ 0.17
NR4A1-222ENST00000567890 DDX10Q13206 875 aaKnown RBP16.08■□□□□ 0.16
NR4A1-222ENST00000567890 NFE2L2Q16236 605 aa16.08■□□□□ 0.16
NR4A1-222ENST00000567890 TBC1D9BQ66K14 1250 aa16.08■□□□□ 0.16
NR4A1-222ENST00000567890 CLEC4GQ6UXB4 293 aa16.08■□□□□ 0.16
NR4A1-222ENST00000567890 PLEKHF1Q96S99 279 aa16.08■□□□□ 0.16
NR4A1-222ENST00000567890 USP16Q9Y5T5 823 aa16.08■□□□□ 0.16
NR4A1-222ENST00000567890 PRAMEF22A3QJZ6 481 aa16.07■□□□□ 0.16
NR4A1-222ENST00000567890 NPHP1O15259 732 aa16.07■□□□□ 0.16
NR4A1-222ENST00000567890 PIP4K2AP48426 406 aaPredicted RBP16.07■□□□□ 0.16
NR4A1-222ENST00000567890 DZIP3Q86Y13 1208 aaKnown RBP16.07■□□□□ 0.16
NR4A1-222ENST00000567890 ZNF652Q9Y2D9 606 aa16.07■□□□□ 0.16
NR4A1-222ENST00000567890 CARMIL3Q8ND23 1372 aa16.07■□□□□ 0.16
NR4A1-222ENST00000567890 BRCA1P38398 1863 aaKnown RBP16.06■□□□□ 0.16
NR4A1-222ENST00000567890 SCN7AQ01118 1682 aa16.06■□□□□ 0.16
NR4A1-222ENST00000567890 CAMTA2O94983 1202 aa16.06■□□□□ 0.16
NR4A1-222ENST00000567890 SETDB2Q96T68 719 aa16.06■□□□□ 0.16
NR4A1-222ENST00000567890 MIS18AQ9NYP9 233 aa16.06■□□□□ 0.16
NR4A1-222ENST00000567890 MYBBP1AQ9BQG0 1328 aaKnown RBP16.05■□□□□ 0.16
NR4A1-222ENST00000567890 H0YIN7 160 aa16.05■□□□□ 0.16
NR4A1-222ENST00000567890 PDE6BP35913 854 aa16.05■□□□□ 0.16
NR4A1-222ENST00000567890 LMOD3Q0VAK6 560 aa16.05■□□□□ 0.16
NR4A1-222ENST00000567890 C9orf131Q5VYM1 1079 aa16.05■□□□□ 0.16
NR4A1-222ENST00000567890 C2CD5Q86YS7 1000 aa16.05■□□□□ 0.16
NR4A1-222ENST00000567890 BRIP1Q9BX63 1249 aa16.05■□□□□ 0.16
NR4A1-222ENST00000567890 BABAM1Q9NWV8 329 aa16.05■□□□□ 0.16
NR4A1-222ENST00000567890 NRXN2Q9P2S2 1712 aa16.05■□□□□ 0.16
NR4A1-222ENST00000567890 AFDNP55196 1824 aaKnown RBP16.04■□□□□ 0.16
NR4A1-222ENST00000567890 TTLL6Q8N841 843 aa16.04■□□□□ 0.16
NR4A1-222ENST00000567890 ARFGEF1Q9Y6D6 1849 aa16.03■□□□□ 0.16
NR4A1-222ENST00000567890 ZC3H4Q9UPT8 1303 aaKnown RBP16.03■□□□□ 0.16
NR4A1-222ENST00000567890 ST5P78524 1137 aa16.03■□□□□ 0.16
NR4A1-222ENST00000567890 CNBD1Q8NA66 436 aa16.03■□□□□ 0.16
NR4A1-222ENST00000567890 THUMPD2Q9BTF0 503 aaKnown RBP16.03■□□□□ 0.16
NR4A1-222ENST00000567890 PRR5LQ6MZQ0 368 aa16.02■□□□□ 0.16
NR4A1-222ENST00000567890 RNF181Q9P0P0 153 aa16.02■□□□□ 0.16
NR4A1-222ENST00000567890 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
NR4A1-222ENST00000567890 ZNF622Q969S3 477 aaKnown RBP eCLIP16.01■□□□□ 0.15
NR4A1-222ENST00000567890 ERBB4Q15303 1308 aa16■□□□□ 0.15
NR4A1-222ENST00000567890 NBPF26B4DH59 902 aa16■□□□□ 0.15
NR4A1-222ENST00000567890 RIPK4P57078 832 aa16■□□□□ 0.15
NR4A1-222ENST00000567890 EIF4A1P60842 406 aaKnown RBP16■□□□□ 0.15
NR4A1-222ENST00000567890 NBPF10Q6P3W6 841 aaKnown RBP16■□□□□ 0.15
NR4A1-222ENST00000567890 NBPF5PQ86XG9 351 aaPredicted RBP16■□□□□ 0.15
NR4A1-222ENST00000567890 NBPF15Q8N660 670 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms