RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 TIAM2Q8IVF5 1701 aa19.32■□□□□ 0.68
SMG1-213ENST00000567737 LBX1P52954 281 aa19.32■□□□□ 0.68
SMG1-213ENST00000567737 MLLT1Q03111 559 aaPredicted RBP19.32■□□□□ 0.68
SMG1-213ENST00000567737 POLRMTO00411 1230 aaKnown RBP19.31■□□□□ 0.68
SMG1-213ENST00000567737 DSG3P32926 999 aa19.31■□□□□ 0.68
SMG1-213ENST00000567737 TONSLQ96HA7 1378 aa19.31■□□□□ 0.68
SMG1-213ENST00000567737 ERVV-2B6SEH9 535 aa19.29■□□□□ 0.68
SMG1-213ENST00000567737 TTLL6Q8N841 843 aa19.29■□□□□ 0.68
SMG1-213ENST00000567737 PPM1GO15355 546 aaPredicted RBP19.28■□□□□ 0.68
SMG1-213ENST00000567737 CRKLP46109 303 aaKnown RBP19.28■□□□□ 0.68
SMG1-213ENST00000567737 WBP1LQ9NX94 342 aa19.28■□□□□ 0.68
SMG1-213ENST00000567737 EMILIN1Q9Y6C2 1016 aa19.28■□□□□ 0.68
SMG1-213ENST00000567737 ABCB7O75027 752 aa19.27■□□□□ 0.68
SMG1-213ENST00000567737 TM4SF1P30408 202 aa19.27■□□□□ 0.68
SMG1-213ENST00000567737 VEGFBP49765 207 aa19.27■□□□□ 0.68
SMG1-213ENST00000567737 EYA1Q99502 592 aa19.27■□□□□ 0.68
SMG1-213ENST00000567737 NFKBIEO00221 500 aa19.26■□□□□ 0.67
SMG1-213ENST00000567737 SLC24A1O60721 1099 aa19.26■□□□□ 0.67
SMG1-213ENST00000567737 CCDC85CA6NKD9 419 aa19.25■□□□□ 0.67
SMG1-213ENST00000567737 ZPR1O75312 459 aa19.25■□□□□ 0.67
SMG1-213ENST00000567737 HSP90AB1P08238 724 aaKnown RBP19.25■□□□□ 0.67
SMG1-213ENST00000567737 ERFEQ4G0M1 354 aa19.25■□□□□ 0.67
SMG1-213ENST00000567737 MYH14Q7Z406 1995 aaKnown RBP19.24■□□□□ 0.67
SMG1-213ENST00000567737 POTEIP0CG38 1075 aa19.24■□□□□ 0.67
SMG1-213ENST00000567737 POTEJP0CG39 1038 aa19.24■□□□□ 0.67
SMG1-213ENST00000567737 HSPA8P11142 646 aaKnown RBP19.24■□□□□ 0.67
SMG1-213ENST00000567737 TESK2Q96S53 571 aa19.24■□□□□ 0.67
SMG1-213ENST00000567737 PASKQ96RG2 1323 aa19.24■□□□□ 0.67
SMG1-213ENST00000567737 TMEM88BA6NKF7 163 aa19.23■□□□□ 0.67
SMG1-213ENST00000567737 PTCD1O75127 700 aaKnown RBP19.23■□□□□ 0.67
SMG1-213ENST00000567737 RGS19P49795 217 aa19.23■□□□□ 0.67
SMG1-213ENST00000567737 CABP4P57796 275 aa19.23■□□□□ 0.67
SMG1-213ENST00000567737 USPL1Q5W0Q7 1092 aa19.23■□□□□ 0.67
SMG1-213ENST00000567737 C2CD5Q86YS7 1000 aa19.22■□□□□ 0.67
SMG1-213ENST00000567737 CCDC88AQ3V6T2 1871 aa19.22■□□□□ 0.67
SMG1-213ENST00000567737 WASHC2AQ641Q2 1341 aa19.22■□□□□ 0.67
SMG1-213ENST00000567737 KIF20BQ96Q89 1820 aa19.21■□□□□ 0.67
SMG1-213ENST00000567737 H0YIN7 160 aa19.21■□□□□ 0.67
SMG1-213ENST00000567737 LDHDQ86WU2 507 aa19.21■□□□□ 0.67
SMG1-213ENST00000567737 ST20-MTHFSA0A0A6YYL1 179 aa19.2■□□□□ 0.66
SMG1-213ENST00000567737 IQCA1LA6NCM1 817 aa19.2■□□□□ 0.66
SMG1-213ENST00000567737 DDNO94850 711 aaPredicted RBP19.2■□□□□ 0.66
SMG1-213ENST00000567737 MAP2K1Q02750 393 aaPredicted RBP19.2■□□□□ 0.66
SMG1-213ENST00000567737 DLEC1Q9Y238 1755 aa19.19■□□□□ 0.66
SMG1-213ENST00000567737 NFIXQ14938 502 aa19.19■□□□□ 0.66
SMG1-213ENST00000567737 SERPINB2P05120 415 aa19.18■□□□□ 0.66
SMG1-213ENST00000567737 VIRMAQ69YN4 1812 aaKnown RBP19.17■□□□□ 0.66
SMG1-213ENST00000567737 DEFB115Q30KQ5 88 aa19.17■□□□□ 0.66
SMG1-213ENST00000567737 INTS5Q6P9B9 1019 aaKnown RBP19.17■□□□□ 0.66
SMG1-213ENST00000567737 C21orf2O43822 256 aa19.16■□□□□ 0.66
SMG1-213ENST00000567737 NRXN2Q9P2S2 1712 aa19.15■□□□□ 0.66
SMG1-213ENST00000567737 RASSF10A6NK89 507 aa19.15■□□□□ 0.66
SMG1-213ENST00000567737 PLEKHO1Q53GL0 409 aaPredicted RBP19.15■□□□□ 0.66
SMG1-213ENST00000567737 ZNF622Q969S3 477 aaKnown RBP eCLIP19.15■□□□□ 0.66
SMG1-213ENST00000567737 TAOK3Q9H2K8 898 aa19.15■□□□□ 0.66
SMG1-213ENST00000567737 NARFQ9UHQ1 456 aa19.15■□□□□ 0.66
SMG1-213ENST00000567737 AFDNP55196 1824 aaKnown RBP19.15■□□□□ 0.66
SMG1-213ENST00000567737 ADAMTS7Q9UKP4 1686 aa19.14■□□□□ 0.66
SMG1-213ENST00000567737 ITGBL1O95965 494 aaPredicted RBP19.14■□□□□ 0.65
SMG1-213ENST00000567737 ZNF530Q6P9A1 599 aaPredicted RBP19.14■□□□□ 0.65
SMG1-213ENST00000567737 CFAP44Q96MT7 982 aa19.14■□□□□ 0.65
SMG1-213ENST00000567737 TAF1DQ9H5J8 278 aaPredicted RBP19.14■□□□□ 0.65
SMG1-213ENST00000567737 SOS1Q07889 1333 aaPredicted RBP19.14■□□□□ 0.65
SMG1-213ENST00000567737 WDR33Q9C0J8 1336 aaKnown RBP19.14■□□□□ 0.65
SMG1-213ENST00000567737 LTBP3Q9NS15 1303 aa19.14■□□□□ 0.65
SMG1-213ENST00000567737 TJP1Q07157 1748 aa19.14■□□□□ 0.65
SMG1-213ENST00000567737 ANKRD26Q9UPS8 1709 aa19.14■□□□□ 0.65
SMG1-213ENST00000567737 DICER1Q9UPY3 1922 aaKnown RBP19.13■□□□□ 0.65
SMG1-213ENST00000567737 MTHFSP49914 203 aa19.13■□□□□ 0.65
SMG1-213ENST00000567737 NFATC2IPQ8NCF5 419 aa19.13■□□□□ 0.65
SMG1-213ENST00000567737 BEGAINQ9BUH8 593 aa19.13■□□□□ 0.65
SMG1-213ENST00000567737 PDZRN3Q9UPQ7 1066 aa19.13■□□□□ 0.65
SMG1-213ENST00000567737 CARMIL3Q8ND23 1372 aa19.12■□□□□ 0.65
SMG1-213ENST00000567737 EAPPQ56P03 285 aaPredicted RBP19.12■□□□□ 0.65
SMG1-213ENST00000567737 CLEC11AQ9Y240 323 aa19.12■□□□□ 0.65
SMG1-213ENST00000567737 COL15A1P39059 1388 aa19.11■□□□□ 0.65
SMG1-213ENST00000567737 EIF4A2Q14240 407 aaKnown RBP19.11■□□□□ 0.65
SMG1-213ENST00000567737 L3MBTL3Q96JM7 780 aaPredicted RBP19.11■□□□□ 0.65
SMG1-213ENST00000567737 ABT1Q9ULW3 272 aaKnown RBP19.11■□□□□ 0.65
SMG1-213ENST00000567737 AMOTQ4VCS5 1084 aa19.1■□□□□ 0.65
SMG1-213ENST00000567737 C1orf141Q5JVX7 400 aa19.1■□□□□ 0.65
SMG1-213ENST00000567737 DNAJC10Q8IXB1 793 aa19.1■□□□□ 0.65
SMG1-213ENST00000567737 PDE6BP35913 854 aa19.09■□□□□ 0.65
SMG1-213ENST00000567737 POLKQ9UBT6 870 aa19.09■□□□□ 0.65
SMG1-213ENST00000567737 ZBTB12Q9Y330 459 aaPredicted RBP19.09■□□□□ 0.65
SMG1-213ENST00000567737 FER1L6Q2WGJ9 1857 aa19.09■□□□□ 0.65
SMG1-213ENST00000567737 BICDL1Q6ZP65 573 aa19.08■□□□□ 0.64
SMG1-213ENST00000567737 BCL2L12Q9HB09 334 aa19.08■□□□□ 0.64
SMG1-213ENST00000567737 SCN4AP35499 1836 aa19.08■□□□□ 0.64
SMG1-213ENST00000567737 CDCA8Q53HL2 280 aa19.07■□□□□ 0.64
SMG1-213ENST00000567737 SOGA3Q5TF21 947 aa19.07■□□□□ 0.64
SMG1-213ENST00000567737 CNTROBQ8N137 903 aa19.07■□□□□ 0.64
SMG1-213ENST00000567737 CARD14Q9BXL6 1004 aa19.07■□□□□ 0.64
SMG1-213ENST00000567737 HACL1Q9UJ83 578 aa19.07■□□□□ 0.64
SMG1-213ENST00000567737 CYP19A1P11511 503 aaPredicted RBP19.06■□□□□ 0.64
SMG1-213ENST00000567737 PAXIP1Q6ZW49 1069 aaPredicted RBP19.06■□□□□ 0.64
SMG1-213ENST00000567737 BRIP1Q9BX63 1249 aa19.06■□□□□ 0.64
SMG1-213ENST00000567737 ECE1P42892 770 aa19.05■□□□□ 0.64
SMG1-213ENST00000567737 PNMA8AQ86V59 439 aaPredicted RBP19.05■□□□□ 0.64
SMG1-213ENST00000567737 CNKSR1Q969H4 720 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms