RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 NARFQ9UHQ1 456 aa24.9■■□□□ 1.58
LINC01238-205ENST00000567549 UBR2Q8IWV8 1755 aa24.9■■□□□ 1.58
LINC01238-205ENST00000567549 DALRD3Q5D0E6 543 aaKnown RBP24.89■■□□□ 1.58
LINC01238-205ENST00000567549 ARHGAP27Q6ZUM4 889 aa24.89■■□□□ 1.58
LINC01238-205ENST00000567549 USPL1Q5W0Q7 1092 aa24.88■■□□□ 1.57
LINC01238-205ENST00000567549 ARFGEF1Q9Y6D6 1849 aa24.88■■□□□ 1.57
LINC01238-205ENST00000567549 BRCA1P38398 1863 aaKnown RBP24.87■■□□□ 1.57
LINC01238-205ENST00000567549 ZNF526Q8TF50 670 aaPredicted RBP24.87■■□□□ 1.57
LINC01238-205ENST00000567549 POLRMTO00411 1230 aaKnown RBP24.86■■□□□ 1.57
LINC01238-205ENST00000567549 NEFMP07197 916 aa24.86■■□□□ 1.57
LINC01238-205ENST00000567549 TM4SF1P30408 202 aa24.86■■□□□ 1.57
LINC01238-205ENST00000567549 ZNF790Q6PG37 636 aa24.86■■□□□ 1.57
LINC01238-205ENST00000567549 RTF1Q92541 710 aaKnown RBP24.85■■□□□ 1.57
LINC01238-205ENST00000567549 FMNL2Q96PY5 1086 aa24.85■■□□□ 1.57
LINC01238-205ENST00000567549 ZBTB1Q9Y2K1 713 aa24.85■■□□□ 1.57
LINC01238-205ENST00000567549 PRKAR2BP31323 418 aa24.84■■□□□ 1.57
LINC01238-205ENST00000567549 DDR1Q08345 913 aa24.84■■□□□ 1.57
LINC01238-205ENST00000567549 HEG1Q9ULI3 1381 aa24.83■■□□□ 1.57
LINC01238-205ENST00000567549 CANXP27824 592 aaKnown RBP24.83■■□□□ 1.57
LINC01238-205ENST00000567549 U2AF1L5P0DN76 240 aaPredicted RBP24.82■■□□□ 1.56
LINC01238-205ENST00000567549 U2AF1Q01081 240 aaKnown RBP eCLIP24.82■■□□□ 1.56
LINC01238-205ENST00000567549 IL17REQ8NFR9 667 aa24.82■■□□□ 1.56
LINC01238-205ENST00000567549 PDZRN3Q9UPQ7 1066 aa24.82■■□□□ 1.56
LINC01238-205ENST00000567549 SIPA1L3O60292 1781 aaPredicted RBP24.81■■□□□ 1.56
LINC01238-205ENST00000567549 RSPH6AQ9H0K4 717 aa24.81■■□□□ 1.56
LINC01238-205ENST00000567549 CEMIPQ8WUJ3 1361 aa24.8■■□□□ 1.56
LINC01238-205ENST00000567549 BTBD11A6QL63 1104 aa24.8■■□□□ 1.56
LINC01238-205ENST00000567549 NFIXQ14938 502 aa24.8■■□□□ 1.56
LINC01238-205ENST00000567549 ZNF496Q96IT1 587 aaPredicted RBP24.8■■□□□ 1.56
LINC01238-205ENST00000567549 SERPINB2P05120 415 aa24.79■■□□□ 1.56
LINC01238-205ENST00000567549 KCNA3P22001 575 aa24.79■■□□□ 1.56
LINC01238-205ENST00000567549 PPP2R1AP30153 589 aa24.79■■□□□ 1.56
LINC01238-205ENST00000567549 IL6STP40189 918 aaPredicted RBP24.79■■□□□ 1.56
LINC01238-205ENST00000567549 EIF5P55010 431 aaKnown RBP24.79■■□□□ 1.56
LINC01238-205ENST00000567549 HTATSF1O43719 755 aaKnown RBP24.78■■□□□ 1.56
LINC01238-205ENST00000567549 NRXN2Q9P2S2 1712 aa24.77■■□□□ 1.56
LINC01238-205ENST00000567549 AFDNP55196 1824 aaKnown RBP24.77■■□□□ 1.56
LINC01238-205ENST00000567549 HSPA6P17066 643 aa24.76■■□□□ 1.55
LINC01238-205ENST00000567549 ZNF330Q9Y3S2 320 aaPredicted RBP24.76■■□□□ 1.55
LINC01238-205ENST00000567549 KDM2BQ8NHM5 1336 aa24.76■■□□□ 1.55
LINC01238-205ENST00000567549 H0YIN7 160 aa24.75■■□□□ 1.55
LINC01238-205ENST00000567549 NPHP1O15259 732 aa24.75■■□□□ 1.55
LINC01238-205ENST00000567549 CHRNA5P30532 468 aa24.75■■□□□ 1.55
LINC01238-205ENST00000567549 C9orf131Q5VYM1 1079 aa24.75■■□□□ 1.55
LINC01238-205ENST00000567549 PNNQ9H307 717 aaKnown RBP24.75■■□□□ 1.55
LINC01238-205ENST00000567549 C16orf71Q8IYS4 520 aaPredicted RBP24.74■■□□□ 1.55
LINC01238-205ENST00000567549 PHACTR3Q96KR7 559 aa24.74■■□□□ 1.55
LINC01238-205ENST00000567549 ZC3H4Q9UPT8 1303 aaKnown RBP24.74■■□□□ 1.55
LINC01238-205ENST00000567549 CARMIL3Q8ND23 1372 aa24.73■■□□□ 1.55
LINC01238-205ENST00000567549 TOMM70O94826 608 aa24.73■■□□□ 1.55
LINC01238-205ENST00000567549 TTLL6Q8N841 843 aa24.73■■□□□ 1.55
LINC01238-205ENST00000567549 SCN7AQ01118 1682 aa24.72■■□□□ 1.55
LINC01238-205ENST00000567549 KIF3CO14782 793 aa24.72■■□□□ 1.55
LINC01238-205ENST00000567549 PDE6BP35913 854 aa24.72■■□□□ 1.55
LINC01238-205ENST00000567549 BCL2L12Q9HB09 334 aa24.72■■□□□ 1.55
LINC01238-205ENST00000567549 RNF181Q9P0P0 153 aa24.72■■□□□ 1.55
LINC01238-205ENST00000567549 DLEC1Q9Y238 1755 aa24.72■■□□□ 1.55
LINC01238-205ENST00000567549 SNRPA1P09661 255 aaKnown RBP24.71■■□□□ 1.55
LINC01238-205ENST00000567549 BICDL1Q6ZP65 573 aa24.71■■□□□ 1.55
LINC01238-205ENST00000567549 ZNF652Q9Y2D9 606 aa24.71■■□□□ 1.55
LINC01238-205ENST00000567549 C2CD5Q86YS7 1000 aa24.7■■□□□ 1.54
LINC01238-205ENST00000567549 SETDB2Q96T68 719 aa24.7■■□□□ 1.54
LINC01238-205ENST00000567549 ST5P78524 1137 aa24.68■■□□□ 1.54
LINC01238-205ENST00000567549 PNISRQ8TF01 805 aaKnown RBP24.68■■□□□ 1.54
LINC01238-205ENST00000567549 BRIP1Q9BX63 1249 aa24.68■■□□□ 1.54
LINC01238-205ENST00000567549 TBC1D2BQ9UPU7 963 aa24.68■■□□□ 1.54
LINC01238-205ENST00000567549 RGL2O15211 777 aa24.67■■□□□ 1.54
LINC01238-205ENST00000567549 TBC1D9BQ66K14 1250 aa24.67■■□□□ 1.54
LINC01238-205ENST00000567549 CLEC4GQ6UXB4 293 aa24.67■■□□□ 1.54
LINC01238-205ENST00000567549 DZIP3Q86Y13 1208 aaKnown RBP24.67■■□□□ 1.54
LINC01238-205ENST00000567549 LMNB1P20700 586 aa24.66■■□□□ 1.54
LINC01238-205ENST00000567549 APLP1P51693 650 aa24.66■■□□□ 1.54
LINC01238-205ENST00000567549 CNBD1Q8NA66 436 aa24.66■■□□□ 1.54
LINC01238-205ENST00000567549 SBF1O95248 1867 aa24.65■■□□□ 1.54
LINC01238-205ENST00000567549 A1BGP04217 495 aa24.65■■□□□ 1.54
LINC01238-205ENST00000567549 TAF7Q15545 349 aaPredicted RBP24.65■■□□□ 1.54
LINC01238-205ENST00000567549 MCM10Q7L590 875 aa24.65■■□□□ 1.54
LINC01238-205ENST00000567549 RBM46Q8TBY0 533 aaKnown RBP24.64■■□□□ 1.54
LINC01238-205ENST00000567549 TNRC6CQ9HCJ0 1690 aaKnown RBP24.64■■□□□ 1.53
LINC01238-205ENST00000567549 MAPK8IP3Q9UPT6 1336 aa24.63■■□□□ 1.53
LINC01238-205ENST00000567549 SOGA3Q5TF21 947 aa24.63■■□□□ 1.53
LINC01238-205ENST00000567549 BCORQ6W2J9 1755 aa24.62■■□□□ 1.53
LINC01238-205ENST00000567549 CAMTA2O94983 1202 aa24.62■■□□□ 1.53
LINC01238-205ENST00000567549 CNKSR1Q969H4 720 aa24.62■■□□□ 1.53
LINC01238-205ENST00000567549 ZNF622Q969S3 477 aaKnown RBP eCLIP24.62■■□□□ 1.53
LINC01238-205ENST00000567549 NMRK2Q9NPI5 230 aa24.62■■□□□ 1.53
LINC01238-205ENST00000567549 FSTL1Q12841 308 aa24.61■■□□□ 1.53
LINC01238-205ENST00000567549 PRR5LQ6MZQ0 368 aa24.61■■□□□ 1.53
LINC01238-205ENST00000567549 USP16Q9Y5T5 823 aa24.61■■□□□ 1.53
LINC01238-205ENST00000567549 KCNQ3O43525 872 aa24.6■■□□□ 1.53
LINC01238-205ENST00000567549 NBPF5PQ86XG9 351 aaPredicted RBP24.59■■□□□ 1.53
LINC01238-205ENST00000567549 STYK1Q6J9G0 422 aa24.58■■□□□ 1.53
LINC01238-205ENST00000567549 DPY19L2Q6NUT2 758 aa24.58■■□□□ 1.53
LINC01238-205ENST00000567549 RASSF7Q02833 373 aa24.57■■□□□ 1.52
LINC01238-205ENST00000567549 TPTE2Q6XPS3 522 aa24.57■■□□□ 1.52
LINC01238-205ENST00000567549 ANKRD31Q8N7Z5 1873 aa24.57■■□□□ 1.52
LINC01238-205ENST00000567549 LAMB4A4D0S4 1761 aa24.57■■□□□ 1.52
LINC01238-205ENST00000567549 DCTN1Q14203 1278 aa24.56■■□□□ 1.52
LINC01238-205ENST00000567549 RALBP1Q15311 655 aa24.56■■□□□ 1.52
LINC01238-205ENST00000567549 MASTLQ96GX5 879 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms