RNA–Protein interactions for RNA: ENST00000567470.1

RBFOX1-217, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-217ENST00000567470 N4BP2Q86UW6 1770 aaPredicted RBP24.12■■□□□ 1.45
RBFOX1-217ENST00000567470 USPL1Q5W0Q7 1092 aa24.12■■□□□ 1.45
RBFOX1-217ENST00000567470 BTBD11A6QL63 1104 aa24.11■■□□□ 1.45
RBFOX1-217ENST00000567470 DDR1Q08345 913 aa24.11■■□□□ 1.45
RBFOX1-217ENST00000567470 MCM10Q7L590 875 aa24.11■■□□□ 1.45
RBFOX1-217ENST00000567470 CANXP27824 592 aaKnown RBP24.1■■□□□ 1.45
RBFOX1-217ENST00000567470 TGFB2P61812 414 aa24.1■■□□□ 1.45
RBFOX1-217ENST00000567470 FMNL2Q96PY5 1086 aa24.1■■□□□ 1.45
RBFOX1-217ENST00000567470 NEFMP07197 916 aa24.09■■□□□ 1.45
RBFOX1-217ENST00000567470 NARFQ9UHQ1 456 aa24.09■■□□□ 1.45
RBFOX1-217ENST00000567470 A0A0G2JLW4 131 aa24.08■■□□□ 1.45
RBFOX1-217ENST00000567470 TEX13AQ9BXU3 409 aaPredicted RBP24.08■■□□□ 1.45
RBFOX1-217ENST00000567470 KCNQ3O43525 872 aa24.07■■□□□ 1.44
RBFOX1-217ENST00000567470 DCTN1Q14203 1278 aa24.07■■□□□ 1.44
RBFOX1-217ENST00000567470 POLRMTO00411 1230 aaKnown RBP24.06■■□□□ 1.44
RBFOX1-217ENST00000567470 DPEP1P16444 411 aa24.06■■□□□ 1.44
RBFOX1-217ENST00000567470 DDX10Q13206 875 aaKnown RBP24.06■■□□□ 1.44
RBFOX1-217ENST00000567470 HTATSF1O43719 755 aaKnown RBP24.05■■□□□ 1.44
RBFOX1-217ENST00000567470 RALBP1Q15311 655 aa24.05■■□□□ 1.44
RBFOX1-217ENST00000567470 BCS1LQ9Y276 419 aa24.05■■□□□ 1.44
RBFOX1-217ENST00000567470 ZNF330Q9Y3S2 320 aaPredicted RBP24.05■■□□□ 1.44
RBFOX1-217ENST00000567470 TM4SF1P30408 202 aa24.04■■□□□ 1.44
RBFOX1-217ENST00000567470 EIF5P55010 431 aaKnown RBP24.04■■□□□ 1.44
RBFOX1-217ENST00000567470 SCN7AQ01118 1682 aa24.04■■□□□ 1.44
RBFOX1-217ENST00000567470 A0A087WZG4 1122 aa24.03■■□□□ 1.44
RBFOX1-217ENST00000567470 NFIXQ14938 502 aa24.03■■□□□ 1.44
RBFOX1-217ENST00000567470 BRCA1P38398 1863 aaKnown RBP24.02■■□□□ 1.44
RBFOX1-217ENST00000567470 BCL2L12Q9HB09 334 aa24.02■■□□□ 1.44
RBFOX1-217ENST00000567470 DLG5Q8TDM6 1919 aa24.02■■□□□ 1.44
RBFOX1-217ENST00000567470 ATP10DQ9P241 1426 aa24.01■■□□□ 1.43
RBFOX1-217ENST00000567470 MAPK8IP3Q9UPT6 1336 aa24.01■■□□□ 1.43
RBFOX1-217ENST00000567470 A1BGP04217 495 aa24■■□□□ 1.43
RBFOX1-217ENST00000567470 IL6STP40189 918 aaPredicted RBP24■■□□□ 1.43
RBFOX1-217ENST00000567470 NPM2Q86SE8 214 aaKnown RBP24■■□□□ 1.43
RBFOX1-217ENST00000567470 PLEKHF1Q96S99 279 aa24■■□□□ 1.43
RBFOX1-217ENST00000567470 AFDNP55196 1824 aaKnown RBP24■■□□□ 1.43
RBFOX1-217ENST00000567470 PNNQ9H307 717 aaKnown RBP23.99■■□□□ 1.43
RBFOX1-217ENST00000567470 ADCY9O60503 1353 aa23.99■■□□□ 1.43
RBFOX1-217ENST00000567470 NRXN2Q9P2S2 1712 aa23.98■■□□□ 1.43
RBFOX1-217ENST00000567470 SNRPA1P09661 255 aaKnown RBP23.98■■□□□ 1.43
RBFOX1-217ENST00000567470 KCNA3P22001 575 aa23.98■■□□□ 1.43
RBFOX1-217ENST00000567470 NFE2L2Q16236 605 aa23.98■■□□□ 1.43
RBFOX1-217ENST00000567470 BICDL1Q6ZP65 573 aa23.98■■□□□ 1.43
RBFOX1-217ENST00000567470 TBC1D2BQ9UPU7 963 aa23.98■■□□□ 1.43
RBFOX1-217ENST00000567470 PRAMEF22A3QJZ6 481 aa23.97■■□□□ 1.43
RBFOX1-217ENST00000567470 GIGYF1O75420 1035 aaPredicted RBP23.97■■□□□ 1.43
RBFOX1-217ENST00000567470 CHRNA5P30532 468 aa23.97■■□□□ 1.43
RBFOX1-217ENST00000567470 TAF7Q15545 349 aaPredicted RBP23.97■■□□□ 1.43
RBFOX1-217ENST00000567470 PIM2Q9P1W9 311 aa23.97■■□□□ 1.43
RBFOX1-217ENST00000567470 MYBBP1AQ9BQG0 1328 aaKnown RBP23.96■■□□□ 1.43
RBFOX1-217ENST00000567470 SERPINB2P05120 415 aa23.96■■□□□ 1.43
RBFOX1-217ENST00000567470 USP16Q9Y5T5 823 aa23.96■■□□□ 1.43
RBFOX1-217ENST00000567470 PIP4K2AP48426 406 aaPredicted RBP23.95■■□□□ 1.42
RBFOX1-217ENST00000567470 MIS18AQ9NYP9 233 aa23.95■■□□□ 1.42
RBFOX1-217ENST00000567470 ARFGEF1Q9Y6D6 1849 aa23.95■■□□□ 1.42
RBFOX1-217ENST00000567470 BCORQ6W2J9 1755 aa23.94■■□□□ 1.42
RBFOX1-217ENST00000567470 KDM3BQ7LBC6 1761 aa23.94■■□□□ 1.42
RBFOX1-217ENST00000567470 DALRD3Q5D0E6 543 aaKnown RBP23.94■■□□□ 1.42
RBFOX1-217ENST00000567470 TBC1D9BQ66K14 1250 aa23.94■■□□□ 1.42
RBFOX1-217ENST00000567470 ARHGAP27Q6ZUM4 889 aa23.94■■□□□ 1.42
RBFOX1-217ENST00000567470 THUMPD2Q9BTF0 503 aaKnown RBP23.94■■□□□ 1.42
RBFOX1-217ENST00000567470 LAMB4A4D0S4 1761 aa23.93■■□□□ 1.42
RBFOX1-217ENST00000567470 ZNF526Q8TF50 670 aaPredicted RBP23.93■■□□□ 1.42
RBFOX1-217ENST00000567470 CARMIL3Q8ND23 1372 aa23.92■■□□□ 1.42
RBFOX1-217ENST00000567470 DZIP3Q86Y13 1208 aaKnown RBP23.92■■□□□ 1.42
RBFOX1-217ENST00000567470 PNISRQ8TF01 805 aaKnown RBP23.92■■□□□ 1.42
RBFOX1-217ENST00000567470 CAMTA2O94983 1202 aa23.91■■□□□ 1.42
RBFOX1-217ENST00000567470 C1QTNF8P60827 252 aa23.91■■□□□ 1.42
RBFOX1-217ENST00000567470 GPBP1L1Q9HC44 474 aaPredicted RBP23.91■■□□□ 1.42
RBFOX1-217ENST00000567470 DLEC1Q9Y238 1755 aa23.9■■□□□ 1.42
RBFOX1-217ENST00000567470 NBPF26B4DH59 902 aa23.87■■□□□ 1.41
RBFOX1-217ENST00000567470 NBPF10Q6P3W6 841 aaKnown RBP23.87■■□□□ 1.41
RBFOX1-217ENST00000567470 C2CD5Q86YS7 1000 aa23.87■■□□□ 1.41
RBFOX1-217ENST00000567470 NBPF15Q8N660 670 aa23.87■■□□□ 1.41
RBFOX1-217ENST00000567470 SETDB2Q96T68 719 aa23.87■■□□□ 1.41
RBFOX1-217ENST00000567470 ANKRD31Q8N7Z5 1873 aa23.86■■□□□ 1.41
RBFOX1-217ENST00000567470 NPHP1O15259 732 aa23.86■■□□□ 1.41
RBFOX1-217ENST00000567470 RIPK4P57078 832 aa23.86■■□□□ 1.41
RBFOX1-217ENST00000567470 WDR43Q15061 677 aaKnown RBP eCLIP23.86■■□□□ 1.41
RBFOX1-217ENST00000567470 H0YIN7 160 aa23.85■■□□□ 1.41
RBFOX1-217ENST00000567470 EIF4A1P60842 406 aaKnown RBP23.85■■□□□ 1.41
RBFOX1-217ENST00000567470 PRR5LQ6MZQ0 368 aa23.85■■□□□ 1.41
RBFOX1-217ENST00000567470 CCDC146Q8IYE0 955 aa23.85■■□□□ 1.41
RBFOX1-217ENST00000567470 CNBD1Q8NA66 436 aa23.85■■□□□ 1.41
RBFOX1-217ENST00000567470 ZNF652Q9Y2D9 606 aa23.85■■□□□ 1.41
RBFOX1-217ENST00000567470 LMOD3Q0VAK6 560 aa23.84■■□□□ 1.41
RBFOX1-217ENST00000567470 CCDC24Q8N4L8 307 aa23.84■■□□□ 1.41
RBFOX1-217ENST00000567470 TMPOP42166 694 aaKnown RBP23.83■■□□□ 1.41
RBFOX1-217ENST00000567470 BRIP1Q9BX63 1249 aa23.83■■□□□ 1.41
RBFOX1-217ENST00000567470 TSPYL4Q9UJ04 414 aa23.83■■□□□ 1.41
RBFOX1-217ENST00000567470 COL11A2P13942 1736 aaPredicted RBP23.83■■□□□ 1.41
RBFOX1-217ENST00000567470 SENP3-EIF4A1A0A087X0R7 540 aa23.82■■□□□ 1.4
RBFOX1-217ENST00000567470 PDE6BP35913 854 aa23.82■■□□□ 1.4
RBFOX1-217ENST00000567470 C9orf131Q5VYM1 1079 aa23.82■■□□□ 1.4
RBFOX1-217ENST00000567470 CLEC4GQ6UXB4 293 aa23.82■■□□□ 1.4
RBFOX1-217ENST00000567470 TTLL6Q8N841 843 aa23.82■■□□□ 1.4
RBFOX1-217ENST00000567470 PRKRIP1Q9H875 184 aaPredicted RBP23.82■■□□□ 1.4
RBFOX1-217ENST00000567470 RRP7AQ9Y3A4 280 aaKnown RBP23.82■■□□□ 1.4
RBFOX1-217ENST00000567470 ST5P78524 1137 aa23.81■■□□□ 1.4
RBFOX1-217ENST00000567470 NBPF5PQ86XG9 351 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms