RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 GNAT3A8MTJ3 354 aa20.55■□□□□ 0.88
CDR2-206ENST00000567406 NFIXQ14938 502 aa20.54■□□□□ 0.88
CDR2-206ENST00000567406 TTC5Q8N0Z6 440 aa20.54■□□□□ 0.88
CDR2-206ENST00000567406 GAS2L2Q8NHY3 880 aa20.54■□□□□ 0.88
CDR2-206ENST00000567406 BCL2L12Q9HB09 334 aa20.54■□□□□ 0.88
CDR2-206ENST00000567406 PIM2Q9P1W9 311 aa20.54■□□□□ 0.88
CDR2-206ENST00000567406 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
CDR2-206ENST00000567406 COL15A1P39059 1388 aa20.54■□□□□ 0.88
CDR2-206ENST00000567406 BRCA1P38398 1863 aaKnown RBP20.54■□□□□ 0.88
CDR2-206ENST00000567406 PRKAR2BP31323 418 aa20.53■□□□□ 0.88
CDR2-206ENST00000567406 TEFQ10587 303 aa20.53■□□□□ 0.88
CDR2-206ENST00000567406 VSIG10Q8N0Z9 540 aa20.53■□□□□ 0.88
CDR2-206ENST00000567406 ZNF496Q96IT1 587 aaPredicted RBP20.53■□□□□ 0.88
CDR2-206ENST00000567406 KCNQ3O43525 872 aa20.52■□□□□ 0.88
CDR2-206ENST00000567406 KIF3CO14782 793 aa20.51■□□□□ 0.87
CDR2-206ENST00000567406 DALRD3Q5D0E6 543 aaKnown RBP20.51■□□□□ 0.87
CDR2-206ENST00000567406 ZNF790Q6PG37 636 aa20.51■□□□□ 0.87
CDR2-206ENST00000567406 BICDL1Q6ZP65 573 aa20.51■□□□□ 0.87
CDR2-206ENST00000567406 RSPH6AQ9H0K4 717 aa20.51■□□□□ 0.87
CDR2-206ENST00000567406 UBR2Q8IWV8 1755 aa20.51■□□□□ 0.87
CDR2-206ENST00000567406 PPP2R1AP30153 589 aa20.5■□□□□ 0.87
CDR2-206ENST00000567406 CFAP53Q96M91 514 aa20.5■□□□□ 0.87
CDR2-206ENST00000567406 ZNF330Q9Y3S2 320 aaPredicted RBP20.5■□□□□ 0.87
CDR2-206ENST00000567406 AFDNP55196 1824 aaKnown RBP20.49■□□□□ 0.87
CDR2-206ENST00000567406 STARD3NLO95772 234 aa20.49■□□□□ 0.87
CDR2-206ENST00000567406 SERPINB2P05120 415 aa20.49■□□□□ 0.87
CDR2-206ENST00000567406 U2AF1L5P0DN76 240 aaPredicted RBP20.49■□□□□ 0.87
CDR2-206ENST00000567406 U2AF1Q01081 240 aaKnown RBP eCLIP20.49■□□□□ 0.87
CDR2-206ENST00000567406 C9orf131Q5VYM1 1079 aa20.49■□□□□ 0.87
CDR2-206ENST00000567406 A1BGP04217 495 aa20.48■□□□□ 0.87
CDR2-206ENST00000567406 EIF5P55010 431 aaKnown RBP20.48■□□□□ 0.87
CDR2-206ENST00000567406 HEG1Q9ULI3 1381 aa20.47■□□□□ 0.87
CDR2-206ENST00000567406 TBC1D2BQ9UPU7 963 aa20.47■□□□□ 0.87
CDR2-206ENST00000567406 SIPA1L3O60292 1781 aaPredicted RBP20.46■□□□□ 0.87
CDR2-206ENST00000567406 ARFGEF1Q9Y6D6 1849 aa20.46■□□□□ 0.87
CDR2-206ENST00000567406 BTBD11A6QL63 1104 aa20.46■□□□□ 0.87
CDR2-206ENST00000567406 PIP4K2AP48426 406 aaPredicted RBP20.46■□□□□ 0.87
CDR2-206ENST00000567406 MCM10Q7L590 875 aa20.46■□□□□ 0.87
CDR2-206ENST00000567406 CCDC24Q8N4L8 307 aa20.46■□□□□ 0.87
CDR2-206ENST00000567406 NMRK2Q9NPI5 230 aa20.46■□□□□ 0.87
CDR2-206ENST00000567406 NUDCQ9Y266 331 aa20.46■□□□□ 0.87
CDR2-206ENST00000567406 PRAMEF22A3QJZ6 481 aa20.45■□□□□ 0.86
CDR2-206ENST00000567406 DCTN1Q14203 1278 aa20.45■□□□□ 0.86
CDR2-206ENST00000567406 TBC1D9BQ66K14 1250 aa20.45■□□□□ 0.86
CDR2-206ENST00000567406 FMNL2Q96PY5 1086 aa20.45■□□□□ 0.86
CDR2-206ENST00000567406 CARMIL3Q8ND23 1372 aa20.45■□□□□ 0.86
CDR2-206ENST00000567406 CEMIPQ8WUJ3 1361 aa20.45■□□□□ 0.86
CDR2-206ENST00000567406 HSPA6P17066 643 aa20.44■□□□□ 0.86
CDR2-206ENST00000567406 RNF181Q9P0P0 153 aa20.44■□□□□ 0.86
CDR2-206ENST00000567406 RASSF7Q02833 373 aa20.43■□□□□ 0.86
CDR2-206ENST00000567406 USP16Q9Y5T5 823 aa20.43■□□□□ 0.86
CDR2-206ENST00000567406 A0A087WZG4 1122 aa20.42■□□□□ 0.86
CDR2-206ENST00000567406 C2CD5Q86YS7 1000 aa20.42■□□□□ 0.86
CDR2-206ENST00000567406 TEX13AQ9BXU3 409 aaPredicted RBP20.42■□□□□ 0.86
CDR2-206ENST00000567406 NRXN2Q9P2S2 1712 aa20.41■□□□□ 0.86
CDR2-206ENST00000567406 RTF1Q92541 710 aaKnown RBP20.4■□□□□ 0.86
CDR2-206ENST00000567406 IL6STP40189 918 aaPredicted RBP20.39■□□□□ 0.85
CDR2-206ENST00000567406 MIS18AQ9NYP9 233 aa20.39■□□□□ 0.85
CDR2-206ENST00000567406 CAMTA2O94983 1202 aa20.38■□□□□ 0.85
CDR2-206ENST00000567406 PRELPP51888 382 aa20.38■□□□□ 0.85
CDR2-206ENST00000567406 TTLL6Q8N841 843 aa20.38■□□□□ 0.85
CDR2-206ENST00000567406 ZNF219Q9P2Y4 722 aaPredicted RBP20.38■□□□□ 0.85
CDR2-206ENST00000567406 SBF1O95248 1867 aa20.38■□□□□ 0.85
CDR2-206ENST00000567406 H0YIN7 160 aa20.37■□□□□ 0.85
CDR2-206ENST00000567406 ZNF622Q969S3 477 aaKnown RBP eCLIP20.37■□□□□ 0.853e-8■□□□□ 8.3
CDR2-206ENST00000567406 TOMM70O94826 608 aa20.36■□□□□ 0.85
CDR2-206ENST00000567406 PRR5LQ6MZQ0 368 aa20.36■□□□□ 0.85
CDR2-206ENST00000567406 NPM2Q86SE8 214 aaKnown RBP20.36■□□□□ 0.85
CDR2-206ENST00000567406 DZIP3Q86Y13 1208 aaKnown RBP20.36■□□□□ 0.85
CDR2-206ENST00000567406 RRAGCQ9HB90 399 aa20.36■□□□□ 0.85
CDR2-206ENST00000567406 SCN7AQ01118 1682 aa20.35■□□□□ 0.85
CDR2-206ENST00000567406 ANKRD31Q8N7Z5 1873 aa20.35■□□□□ 0.85
CDR2-206ENST00000567406 SNRPA1P09661 255 aaKnown RBP20.34■□□□□ 0.85
CDR2-206ENST00000567406 SETDB2Q96T68 719 aa20.34■□□□□ 0.85
CDR2-206ENST00000567406 DLEC1Q9Y238 1755 aa20.34■□□□□ 0.85
CDR2-206ENST00000567406 NPHP1O15259 732 aa20.33■□□□□ 0.85
CDR2-206ENST00000567406 BRIP1Q9BX63 1249 aa20.33■□□□□ 0.85
CDR2-206ENST00000567406 NBPF26B4DH59 902 aa20.32■□□□□ 0.84
CDR2-206ENST00000567406 NFKBIEO00221 500 aa20.32■□□□□ 0.84
CDR2-206ENST00000567406 C21orf2O43822 256 aa20.32■□□□□ 0.84
CDR2-206ENST00000567406 NBPF10Q6P3W6 841 aaKnown RBP20.32■□□□□ 0.84
CDR2-206ENST00000567406 NBPF15Q8N660 670 aa20.32■□□□□ 0.84
CDR2-206ENST00000567406 KDM2BQ8NHM5 1336 aa20.31■□□□□ 0.84
CDR2-206ENST00000567406 PDE6BP35913 854 aa20.31■□□□□ 0.84
CDR2-206ENST00000567406 TAF7Q15545 349 aaPredicted RBP20.31■□□□□ 0.84
CDR2-206ENST00000567406 C16orf71Q8IYS4 520 aaPredicted RBP20.31■□□□□ 0.84
CDR2-206ENST00000567406 CNBD1Q8NA66 436 aa20.31■□□□□ 0.84
CDR2-206ENST00000567406 THUMPD2Q9BTF0 503 aaKnown RBP20.31■□□□□ 0.84
CDR2-206ENST00000567406 CCDC88AQ3V6T2 1871 aa20.3■□□□□ 0.84
CDR2-206ENST00000567406 HTATSF1O43719 755 aaKnown RBP20.3■□□□□ 0.84
CDR2-206ENST00000567406 LMNB1P20700 586 aa20.3■□□□□ 0.84
CDR2-206ENST00000567406 HTRA3P83110 453 aa20.3■□□□□ 0.84
CDR2-206ENST00000567406 COL11A2P13942 1736 aaPredicted RBP20.3■□□□□ 0.84
CDR2-206ENST00000567406 FAM177BA6PVY3 158 aa20.29■□□□□ 0.84
CDR2-206ENST00000567406 NGEFQ8N5V2 710 aa20.29■□□□□ 0.84
CDR2-206ENST00000567406 PLEKHF1Q96S99 279 aa20.29■□□□□ 0.84
CDR2-206ENST00000567406 APLP1P51693 650 aa20.28■□□□□ 0.84
CDR2-206ENST00000567406 RBM46Q8TBY0 533 aaKnown RBP20.28■□□□□ 0.84
CDR2-206ENST00000567406 BCORQ6W2J9 1755 aa20.28■□□□□ 0.84
CDR2-206ENST00000567406 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms