RNA–Protein interactions for RNA: ENST00000567375.1

NSMCE1-212, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-212ENST00000567375 SMARCC1Q92922 1105 aaPredicted RBP11.63□□□□□ -0.55
NSMCE1-212ENST00000567375 RTL1A6NKG5 1358 aa11.63□□□□□ -0.55
NSMCE1-212ENST00000567375 MAP3K19Q56UN5 1328 aa11.62□□□□□ -0.55
NSMCE1-212ENST00000567375 PCDH11XQ9BZA7 1347 aa11.62□□□□□ -0.55
NSMCE1-212ENST00000567375 PCDH11YQ9BZA8 1340 aa11.62□□□□□ -0.55
NSMCE1-212ENST00000567375 HOXC9P31274 260 aa11.62□□□□□ -0.55
NSMCE1-212ENST00000567375 SMIM5Q71RC9 77 aa11.62□□□□□ -0.55
NSMCE1-212ENST00000567375 L3MBTL3Q96JM7 780 aaPredicted RBP11.62□□□□□ -0.55
NSMCE1-212ENST00000567375 A0A0G2JLW4 131 aa11.61□□□□□ -0.55
NSMCE1-212ENST00000567375 MPRIPQ6WCQ1 1025 aa11.61□□□□□ -0.55
NSMCE1-212ENST00000567375 A0A1W2PP64 1363 aa11.61□□□□□ -0.55
NSMCE1-212ENST00000567375 ZNF831Q5JPB2 1677 aa11.61□□□□□ -0.55
NSMCE1-212ENST00000567375 TIAM2Q8IVF5 1701 aa11.6□□□□□ -0.55
NSMCE1-212ENST00000567375 FCHSD2O94868 740 aa11.6□□□□□ -0.55
NSMCE1-212ENST00000567375 HDGFL2Q7Z4V5 671 aaPredicted RBP11.6□□□□□ -0.55
NSMCE1-212ENST00000567375 LINC00116Q8NCU8 138 aa11.6□□□□□ -0.55
NSMCE1-212ENST00000567375 RRAGCQ9HB90 399 aa11.6□□□□□ -0.55
NSMCE1-212ENST00000567375 COL5A3P25940 1745 aaPredicted RBP11.6□□□□□ -0.55
NSMCE1-212ENST00000567375 GNPATO15228 680 aa11.59□□□□□ -0.55
NSMCE1-212ENST00000567375 DPEP1P16444 411 aa11.59□□□□□ -0.55
NSMCE1-212ENST00000567375 RAPGEF4Q8WZA2 1011 aa11.59□□□□□ -0.55
NSMCE1-212ENST00000567375 RNF25Q96BH1 459 aaPredicted RBP11.59□□□□□ -0.55
NSMCE1-212ENST00000567375 RNF181Q9P0P0 153 aa11.59□□□□□ -0.55
NSMCE1-212ENST00000567375 SMG6Q86US8 1419 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-212ENST00000567375 ZC3H4Q9UPT8 1303 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-212ENST00000567375 ROCK2O75116 1388 aaKnown RBP11.58□□□□□ -0.56
NSMCE1-212ENST00000567375 LOC102724428A0A0B4J2F2 783 aa11.58□□□□□ -0.56
NSMCE1-212ENST00000567375 AMPHP49418 695 aa11.58□□□□□ -0.56
NSMCE1-212ENST00000567375 SIK1P57059 783 aa11.58□□□□□ -0.56
NSMCE1-212ENST00000567375 NBPF6Q5VWK0 638 aa11.58□□□□□ -0.56
NSMCE1-212ENST00000567375 DCAF5Q96JK2 942 aa11.58□□□□□ -0.56
NSMCE1-212ENST00000567375 NBPF4Q96M43 638 aa11.58□□□□□ -0.56
NSMCE1-212ENST00000567375 TMEM121BQ9BXQ6 578 aaPredicted RBP11.58□□□□□ -0.56
NSMCE1-212ENST00000567375 KDM6AO15550 1401 aaPredicted RBP11.58□□□□□ -0.56
NSMCE1-212ENST00000567375 TATP17735 454 aaPredicted RBP11.57□□□□□ -0.56
NSMCE1-212ENST00000567375 KCNA3P22001 575 aa11.57□□□□□ -0.56
NSMCE1-212ENST00000567375 C3orf67Q6ZVT6 689 aa11.57□□□□□ -0.56
NSMCE1-212ENST00000567375 CCDC87Q9NVE4 849 aa11.57□□□□□ -0.56
NSMCE1-212ENST00000567375 SNPHO15079 494 aa11.56□□□□□ -0.56
NSMCE1-212ENST00000567375 CYP27B1O15528 508 aa11.56□□□□□ -0.56
NSMCE1-212ENST00000567375 ITPK1Q13572 414 aa11.56□□□□□ -0.56
NSMCE1-212ENST00000567375 NLGN1Q8N2Q7 840 aa11.56□□□□□ -0.56
NSMCE1-212ENST00000567375 USHBP1Q8N6Y0 703 aa11.56□□□□□ -0.56
NSMCE1-212ENST00000567375 TMC1Q8TDI8 760 aa11.56□□□□□ -0.56
NSMCE1-212ENST00000567375 PIGBQ92521 554 aa11.56□□□□□ -0.56
NSMCE1-212ENST00000567375 TERF2IPQ9NYB0 399 aa11.56□□□□□ -0.56
NSMCE1-212ENST00000567375 DLEC1Q9Y238 1755 aa11.56□□□□□ -0.56
NSMCE1-212ENST00000567375 MARVELD3Q96A59 401 aa11.55□□□□□ -0.56
NSMCE1-212ENST00000567375 SLC12A5Q9H2X9 1139 aa11.55□□□□□ -0.56
NSMCE1-212ENST00000567375 PRDM10Q9NQV6 1147 aa11.55□□□□□ -0.56
NSMCE1-212ENST00000567375 PIM2Q9P1W9 311 aa11.55□□□□□ -0.56
NSMCE1-212ENST00000567375 CCDC88AQ3V6T2 1871 aa11.55□□□□□ -0.56
NSMCE1-212ENST00000567375 KDRP35968 1356 aa11.54□□□□□ -0.56
NSMCE1-212ENST00000567375 NCAPD2Q15021 1401 aa11.54□□□□□ -0.56
NSMCE1-212ENST00000567375 TMF1P82094 1093 aa11.54□□□□□ -0.56
NSMCE1-212ENST00000567375 EFCAB3Q8N7B9 438 aa11.54□□□□□ -0.56
NSMCE1-212ENST00000567375 COG3Q96JB2 828 aa11.54□□□□□ -0.56
NSMCE1-212ENST00000567375 VEGFAP15692 232 aaPredicted RBP11.53□□□□□ -0.56
NSMCE1-212ENST00000567375 NKX1-1Q15270 411 aaPredicted RBP11.53□□□□□ -0.56
NSMCE1-212ENST00000567375 DALRD3Q5D0E6 543 aaKnown RBP11.53□□□□□ -0.56
NSMCE1-212ENST00000567375 MYH14Q7Z406 1995 aaKnown RBP11.52□□□□□ -0.56
NSMCE1-212ENST00000567375 VIRMAQ69YN4 1812 aaKnown RBP11.52□□□□□ -0.57
NSMCE1-212ENST00000567375 POTEB3A0JP26 581 aa11.52□□□□□ -0.57
NSMCE1-212ENST00000567375 FOXN1O15353 648 aa11.52□□□□□ -0.57
NSMCE1-212ENST00000567375 GYS1P13807 737 aa11.52□□□□□ -0.57
NSMCE1-212ENST00000567375 FBLN1P23142 703 aa11.52□□□□□ -0.57
NSMCE1-212ENST00000567375 ATP6V1AP38606 617 aa11.52□□□□□ -0.57
NSMCE1-212ENST00000567375 FAM161AQ3B820 660 aa11.52□□□□□ -0.57
NSMCE1-212ENST00000567375 TRAPPC3LQ5T215 181 aa11.52□□□□□ -0.57
NSMCE1-212ENST00000567375 POTEBQ6S5H4 581 aa11.52□□□□□ -0.57
NSMCE1-212ENST00000567375 BOLA1Q9Y3E2 137 aa11.52□□□□□ -0.57
NSMCE1-212ENST00000567375 RTCBQ9Y3I0 505 aaKnown RBP11.52□□□□□ -0.57
NSMCE1-212ENST00000567375 PARP3Q9Y6F1 533 aa11.52□□□□□ -0.57
NSMCE1-212ENST00000567375 INSRP06213 1382 aa11.52□□□□□ -0.57
NSMCE1-212ENST00000567375 KIF20BQ96Q89 1820 aa11.51□□□□□ -0.57
NSMCE1-212ENST00000567375 GLTPD2A6NH11 291 aa11.51□□□□□ -0.57
NSMCE1-212ENST00000567375 L3MBTL2Q969R5 705 aa11.51□□□□□ -0.57
NSMCE1-212ENST00000567375 ANKRD26Q9UPS8 1709 aa11.51□□□□□ -0.57
NSMCE1-212ENST00000567375 KIF24Q5T7B8 1368 aa11.51□□□□□ -0.57
NSMCE1-212ENST00000567375 DICER1Q9UPY3 1922 aaKnown RBP11.5□□□□□ -0.57
NSMCE1-212ENST00000567375 HOXB3P14651 431 aaPredicted RBP11.5□□□□□ -0.57
NSMCE1-212ENST00000567375 RRS1Q15050 365 aaKnown RBP11.5□□□□□ -0.57
NSMCE1-212ENST00000567375 PUS7Q96PZ0 661 aaKnown RBP11.5□□□□□ -0.57
NSMCE1-212ENST00000567375 TMOD3Q9NYL9 352 aa11.5□□□□□ -0.57
NSMCE1-212ENST00000567375 ASAP1Q9ULH1 1129 aa11.5□□□□□ -0.57
NSMCE1-212ENST00000567375 FLT4P35916 1363 aa11.5□□□□□ -0.57
NSMCE1-212ENST00000567375 CTCFP49711 727 aaPredicted RBP11.49□□□□□ -0.57
NSMCE1-212ENST00000567375 RASSF7Q02833 373 aa11.49□□□□□ -0.57
NSMCE1-212ENST00000567375 ARHGEF1Q92888 912 aaKnown RBP11.49□□□□□ -0.57
NSMCE1-212ENST00000567375 MKRN1Q9UHC7 482 aaKnown RBP11.49□□□□□ -0.57
NSMCE1-212ENST00000567375 CNTNAP4Q9C0A0 1308 aa11.49□□□□□ -0.57
NSMCE1-212ENST00000567375 CNTNAP1P78357 1384 aa11.49□□□□□ -0.57
NSMCE1-212ENST00000567375 ADAMTS7Q9UKP4 1686 aa11.49□□□□□ -0.57
NSMCE1-212ENST00000567375 NRXN2Q9P2S2 1712 aa11.49□□□□□ -0.57
NSMCE1-212ENST00000567375 LMNB1P20700 586 aa11.48□□□□□ -0.57
NSMCE1-212ENST00000567375 RC3H1Q5TC82 1133 aaKnown RBP11.48□□□□□ -0.57
NSMCE1-212ENST00000567375 ATG3Q9NT62 314 aa11.48□□□□□ -0.57
NSMCE1-212ENST00000567375 AFDNP55196 1824 aaKnown RBP11.48□□□□□ -0.57
NSMCE1-212ENST00000567375 CHRNA5P30532 468 aa11.47□□□□□ -0.57
NSMCE1-212ENST00000567375 RFC4P35249 363 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms