RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 FKBP8Q14318 412 aa22.02■■□□□ 1.12
PKD1-233ENST00000567355 FMNL2Q96PY5 1086 aa22.02■■□□□ 1.12
PKD1-233ENST00000567355 TEX13AQ9BXU3 409 aaPredicted RBP22.02■■□□□ 1.12
PKD1-233ENST00000567355 COL15A1P39059 1388 aa22.01■■□□□ 1.11
PKD1-233ENST00000567355 STARD3NLO95772 234 aa22.01■■□□□ 1.11
PKD1-233ENST00000567355 ZEB1P37275 1124 aaPredicted RBP22.01■■□□□ 1.11
PKD1-233ENST00000567355 EIF5P55010 431 aaKnown RBP22■■□□□ 1.11
PKD1-233ENST00000567355 NARFQ9UHQ1 456 aa22■■□□□ 1.11
PKD1-233ENST00000567355 PXDNLA1KZ92 1463 aa21.99■■□□□ 1.11
PKD1-233ENST00000567355 TM4SF1P30408 202 aa21.99■■□□□ 1.11
PKD1-233ENST00000567355 NFE2L2Q16236 605 aa21.99■■□□□ 1.11
PKD1-233ENST00000567355 USPL1Q5W0Q7 1092 aa21.99■■□□□ 1.11
PKD1-233ENST00000567355 PNNQ9H307 717 aaKnown RBP21.99■■□□□ 1.11
PKD1-233ENST00000567355 DDR1Q08345 913 aa21.98■■□□□ 1.11
PKD1-233ENST00000567355 PELP1Q8IZL8 1130 aaKnown RBP21.98■■□□□ 1.11
PKD1-233ENST00000567355 GRIN3BO60391 1043 aa21.97■■□□□ 1.11
PKD1-233ENST00000567355 ZPR1O75312 459 aa21.97■■□□□ 1.11
PKD1-233ENST00000567355 NEFMP07197 916 aa21.97■■□□□ 1.11
PKD1-233ENST00000567355 PRKRIP1Q9H875 184 aaPredicted RBP21.97■■□□□ 1.11
PKD1-233ENST00000567355 BCL2L12Q9HB09 334 aa21.97■■□□□ 1.11
PKD1-233ENST00000567355 PARP3Q9Y6F1 533 aa21.97■■□□□ 1.11
PKD1-233ENST00000567355 KDM3BQ7LBC6 1761 aa21.97■■□□□ 1.11
PKD1-233ENST00000567355 CANXP27824 592 aaKnown RBP21.96■■□□□ 1.11
PKD1-233ENST00000567355 TGFB2P61812 414 aa21.96■■□□□ 1.11
PKD1-233ENST00000567355 TAF7Q15545 349 aaPredicted RBP21.96■■□□□ 1.11
PKD1-233ENST00000567355 NRXN2Q9P2S2 1712 aa21.95■■□□□ 1.1
PKD1-233ENST00000567355 N4BP2Q86UW6 1770 aaPredicted RBP21.95■■□□□ 1.1
PKD1-233ENST00000567355 POLRMTO00411 1230 aaKnown RBP21.95■■□□□ 1.1
PKD1-233ENST00000567355 IL6STP40189 918 aaPredicted RBP21.95■■□□□ 1.1
PKD1-233ENST00000567355 USP16Q9Y5T5 823 aa21.94■■□□□ 1.1
PKD1-233ENST00000567355 MAPK8IP3Q9UPT6 1336 aa21.94■■□□□ 1.1
PKD1-233ENST00000567355 SCN7AQ01118 1682 aa21.94■■□□□ 1.1
PKD1-233ENST00000567355 BRCA1P38398 1863 aaKnown RBP21.94■■□□□ 1.1
PKD1-233ENST00000567355 PRAMEF22A3QJZ6 481 aa21.93■■□□□ 1.1
PKD1-233ENST00000567355 A1BGP04217 495 aa21.93■■□□□ 1.1
PKD1-233ENST00000567355 SNRPA1P09661 255 aaKnown RBP21.93■■□□□ 1.1
PKD1-233ENST00000567355 A0A087WZG4 1122 aa21.92■■□□□ 1.1
PKD1-233ENST00000567355 NFIXQ14938 502 aa21.92■■□□□ 1.1
PKD1-233ENST00000567355 AFDNP55196 1824 aaKnown RBP21.92■■□□□ 1.1
PKD1-233ENST00000567355 PNISRQ8TF01 805 aaKnown RBP21.91■■□□□ 1.1
PKD1-233ENST00000567355 MIS18AQ9NYP9 233 aa21.91■■□□□ 1.1
PKD1-233ENST00000567355 KCNA3P22001 575 aa21.9■■□□□ 1.1
PKD1-233ENST00000567355 ZNF784Q8NCA9 323 aaPredicted RBP21.9■■□□□ 1.1
PKD1-233ENST00000567355 THUMPD2Q9BTF0 503 aaKnown RBP21.9■■□□□ 1.1
PKD1-233ENST00000567355 LAMB4A4D0S4 1761 aa21.89■■□□□ 1.1
PKD1-233ENST00000567355 A0A0G2JLW4 131 aa21.89■■□□□ 1.09
PKD1-233ENST00000567355 BCORQ6W2J9 1755 aa21.89■■□□□ 1.09
PKD1-233ENST00000567355 DPEP1P16444 411 aa21.88■■□□□ 1.09
PKD1-233ENST00000567355 TMPOP42166 694 aaKnown RBP21.88■■□□□ 1.09
PKD1-233ENST00000567355 RIPK4P57078 832 aa21.87■■□□□ 1.09
PKD1-233ENST00000567355 WWC3Q9ULE0 1092 aa21.87■■□□□ 1.09
PKD1-233ENST00000567355 TBC1D2BQ9UPU7 963 aa21.87■■□□□ 1.09
PKD1-233ENST00000567355 NBPF26B4DH59 902 aa21.86■■□□□ 1.09
PKD1-233ENST00000567355 CAMTA2O94983 1202 aa21.86■■□□□ 1.09
PKD1-233ENST00000567355 EIF4A1P60842 406 aaKnown RBP21.86■■□□□ 1.09
PKD1-233ENST00000567355 NBPF10Q6P3W6 841 aaKnown RBP21.86■■□□□ 1.09
PKD1-233ENST00000567355 NBPF15Q8N660 670 aa21.86■■□□□ 1.09
PKD1-233ENST00000567355 GIGYF1O75420 1035 aaPredicted RBP21.85■■□□□ 1.09
PKD1-233ENST00000567355 ADAMTS8Q9UP79 889 aa21.85■■□□□ 1.09
PKD1-233ENST00000567355 SERPINB2P05120 415 aa21.84■■□□□ 1.09
PKD1-233ENST00000567355 PIP4K2AP48426 406 aaPredicted RBP21.84■■□□□ 1.09
PKD1-233ENST00000567355 TBC1D9BQ66K14 1250 aa21.84■■□□□ 1.09
PKD1-233ENST00000567355 RUNDC1Q96C34 613 aa21.84■■□□□ 1.09
PKD1-233ENST00000567355 ARFGEF1Q9Y6D6 1849 aa21.83■■□□□ 1.09
PKD1-233ENST00000567355 WDR43Q15061 677 aaKnown RBP eCLIP21.83■■□□□ 1.09
PKD1-233ENST00000567355 CCDC146Q8IYE0 955 aa21.83■■□□□ 1.09
PKD1-233ENST00000567355 BABAM1Q9NWV8 329 aa21.83■■□□□ 1.09
PKD1-233ENST00000567355 ZNF330Q9Y3S2 320 aaPredicted RBP21.83■■□□□ 1.09
PKD1-233ENST00000567355 ADCY9O60503 1353 aa21.83■■□□□ 1.08
PKD1-233ENST00000567355 LMOD3Q0VAK6 560 aa21.82■■□□□ 1.08
PKD1-233ENST00000567355 DZIP3Q86Y13 1208 aaKnown RBP21.82■■□□□ 1.08
PKD1-233ENST00000567355 DLEC1Q9Y238 1755 aa21.82■■□□□ 1.08
PKD1-233ENST00000567355 RGL2O15211 777 aa21.81■■□□□ 1.08
PKD1-233ENST00000567355 TRIM35Q9UPQ4 493 aa21.81■■□□□ 1.08
PKD1-233ENST00000567355 BCS1LQ9Y276 419 aa21.81■■□□□ 1.08
PKD1-233ENST00000567355 CARMIL3Q8ND23 1372 aa21.81■■□□□ 1.08
PKD1-233ENST00000567355 CHRNA5P30532 468 aa21.8■■□□□ 1.08
PKD1-233ENST00000567355 CLEC4GQ6UXB4 293 aa21.8■■□□□ 1.08
PKD1-233ENST00000567355 PIM2Q9P1W9 311 aa21.8■■□□□ 1.08
PKD1-233ENST00000567355 RRP7AQ9Y3A4 280 aaKnown RBP21.8■■□□□ 1.08
PKD1-233ENST00000567355 ANKRD31Q8N7Z5 1873 aa21.79■■□□□ 1.08
PKD1-233ENST00000567355 ZNF316A6NFI3 1004 aaPredicted RBP21.79■■□□□ 1.08
PKD1-233ENST00000567355 BICDL1Q6ZP65 573 aa21.79■■□□□ 1.08
PKD1-233ENST00000567355 NPM2Q86SE8 214 aaKnown RBP21.79■■□□□ 1.08
PKD1-233ENST00000567355 TSPYL4Q9UJ04 414 aa21.78■■□□□ 1.08
PKD1-233ENST00000567355 PRR5LQ6MZQ0 368 aa21.77■■□□□ 1.08
PKD1-233ENST00000567355 DALRD3Q5D0E6 543 aaKnown RBP21.76■■□□□ 1.07
PKD1-233ENST00000567355 SETDB2Q96T68 719 aa21.76■■□□□ 1.07
PKD1-233ENST00000567355 ATP10DQ9P241 1426 aa21.75■■□□□ 1.07
PKD1-233ENST00000567355 CHL1O00533 1208 aa21.75■■□□□ 1.07
PKD1-233ENST00000567355 NEUROD2Q15784 382 aa21.75■■□□□ 1.07
PKD1-233ENST00000567355 BRIP1Q9BX63 1249 aa21.75■■□□□ 1.07
PKD1-233ENST00000567355 ERBB4Q15303 1308 aa21.74■■□□□ 1.07
PKD1-233ENST00000567355 COL11A2P13942 1736 aaPredicted RBP21.73■■□□□ 1.07
PKD1-233ENST00000567355 CCDC184Q52MB2 194 aa21.73■■□□□ 1.07
PKD1-233ENST00000567355 LRP10Q7Z4F1 713 aa21.73■■□□□ 1.07
PKD1-233ENST00000567355 ZNF652Q9Y2D9 606 aa21.73■■□□□ 1.07
PKD1-233ENST00000567355 PDIA6Q15084 440 aa21.72■■□□□ 1.07
PKD1-233ENST00000567355 ERVV-1B6SEH8 477 aa21.71■■□□□ 1.07
PKD1-233ENST00000567355 HLFQ16534 295 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms