RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 DDR1Q08345 913 aa19.05■□□□□ 0.64
COMMD4-216ENST00000567023 USPL1Q5W0Q7 1092 aa19.05■□□□□ 0.64
COMMD4-216ENST00000567023 ZNF496Q96IT1 587 aaPredicted RBP19.05■□□□□ 0.64
COMMD4-216ENST00000567023 POLRMTO00411 1230 aaKnown RBP19.04■□□□□ 0.64
COMMD4-216ENST00000567023 KCNA3P22001 575 aa19.04■□□□□ 0.64
COMMD4-216ENST00000567023 C1QTNF8P60827 252 aa19.04■□□□□ 0.64
COMMD4-216ENST00000567023 WWC3Q9ULE0 1092 aa19.04■□□□□ 0.64
COMMD4-216ENST00000567023 ADCY9O60503 1353 aa19.04■□□□□ 0.64
COMMD4-216ENST00000567023 COL15A1P39059 1388 aa19.04■□□□□ 0.64
COMMD4-216ENST00000567023 HEG1Q9ULI3 1381 aa19.04■□□□□ 0.64
COMMD4-216ENST00000567023 DPEP1P16444 411 aa19.03■□□□□ 0.64
COMMD4-216ENST00000567023 EIF5P55010 431 aaKnown RBP19.03■□□□□ 0.64
COMMD4-216ENST00000567023 N4BP2Q86UW6 1770 aaPredicted RBP19.03■□□□□ 0.64
COMMD4-216ENST00000567023 FMNL2Q96PY5 1086 aa19.02■□□□□ 0.64
COMMD4-216ENST00000567023 BTBD11A6QL63 1104 aa19.01■□□□□ 0.63
COMMD4-216ENST00000567023 HTATSF1O43719 755 aaKnown RBP19.01■□□□□ 0.63
COMMD4-216ENST00000567023 GIGYF1O75420 1035 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-216ENST00000567023 BCL2L12Q9HB09 334 aa19.01■□□□□ 0.63
COMMD4-216ENST00000567023 BCS1LQ9Y276 419 aa19.01■□□□□ 0.63
COMMD4-216ENST00000567023 BRCA1P38398 1863 aaKnown RBP19.01■□□□□ 0.63
COMMD4-216ENST00000567023 ATP10DQ9P241 1426 aa19■□□□□ 0.63
COMMD4-216ENST00000567023 CANXP27824 592 aaKnown RBP19■□□□□ 0.63
COMMD4-216ENST00000567023 NFIXQ14938 502 aa19■□□□□ 0.63
COMMD4-216ENST00000567023 RTF1Q92541 710 aaKnown RBP19■□□□□ 0.63
COMMD4-216ENST00000567023 A0A087WZG4 1122 aa18.99■□□□□ 0.63
COMMD4-216ENST00000567023 PIM2Q9P1W9 311 aa18.99■□□□□ 0.63
COMMD4-216ENST00000567023 IL6STP40189 918 aaPredicted RBP18.98■□□□□ 0.63
COMMD4-216ENST00000567023 KCNQ3O43525 872 aa18.97■□□□□ 0.63
COMMD4-216ENST00000567023 MCM10Q7L590 875 aa18.97■□□□□ 0.63
COMMD4-216ENST00000567023 GPBP1L1Q9HC44 474 aaPredicted RBP18.96■□□□□ 0.63
COMMD4-216ENST00000567023 NRXN2Q9P2S2 1712 aa18.96■□□□□ 0.63
COMMD4-216ENST00000567023 SERPINB2P05120 415 aa18.95■□□□□ 0.62
COMMD4-216ENST00000567023 DALRD3Q5D0E6 543 aaKnown RBP18.95■□□□□ 0.62
COMMD4-216ENST00000567023 PLEKHF1Q96S99 279 aa18.95■□□□□ 0.62
COMMD4-216ENST00000567023 A1BGP04217 495 aa18.94■□□□□ 0.62
COMMD4-216ENST00000567023 DCTN1Q14203 1278 aa18.94■□□□□ 0.62
COMMD4-216ENST00000567023 ARHGAP27Q6ZUM4 889 aa18.94■□□□□ 0.62
COMMD4-216ENST00000567023 USP16Q9Y5T5 823 aa18.94■□□□□ 0.62
COMMD4-216ENST00000567023 AFDNP55196 1824 aaKnown RBP18.94■□□□□ 0.62
COMMD4-216ENST00000567023 ARFGEF1Q9Y6D6 1849 aa18.94■□□□□ 0.62
COMMD4-216ENST00000567023 SNRPA1P09661 255 aaKnown RBP18.93■□□□□ 0.62
COMMD4-216ENST00000567023 CHRNA5P30532 468 aa18.93■□□□□ 0.62
COMMD4-216ENST00000567023 TAF7Q15545 349 aaPredicted RBP18.93■□□□□ 0.62
COMMD4-216ENST00000567023 NEFMP07197 916 aa18.92■□□□□ 0.62
COMMD4-216ENST00000567023 TBC1D2BQ9UPU7 963 aa18.92■□□□□ 0.62
COMMD4-216ENST00000567023 CEP350Q5VT06 3117 aa18.92■□□□□ 0.62
COMMD4-216ENST00000567023 RALBP1Q15311 655 aa18.91■□□□□ 0.62
COMMD4-216ENST00000567023 TBC1D9BQ66K14 1250 aa18.91■□□□□ 0.62
COMMD4-216ENST00000567023 PNNQ9H307 717 aaKnown RBP18.91■□□□□ 0.62
COMMD4-216ENST00000567023 NPM2Q86SE8 214 aaKnown RBP18.9■□□□□ 0.62
COMMD4-216ENST00000567023 SCN7AQ01118 1682 aa18.89■□□□□ 0.61
COMMD4-216ENST00000567023 SENP3-EIF4A1A0A087X0R7 540 aa18.89■□□□□ 0.61
COMMD4-216ENST00000567023 PRAMEF22A3QJZ6 481 aa18.89■□□□□ 0.61
COMMD4-216ENST00000567023 CAMTA2O94983 1202 aa18.89■□□□□ 0.61
COMMD4-216ENST00000567023 ZNF526Q8TF50 670 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-216ENST00000567023 ZNF330Q9Y3S2 320 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-216ENST00000567023 NFE2L2Q16236 605 aa18.88■□□□□ 0.61
COMMD4-216ENST00000567023 BICDL1Q6ZP65 573 aa18.88■□□□□ 0.61
COMMD4-216ENST00000567023 PNISRQ8TF01 805 aaKnown RBP18.88■□□□□ 0.61
COMMD4-216ENST00000567023 PDZRN3Q9UPQ7 1066 aa18.88■□□□□ 0.61
COMMD4-216ENST00000567023 RGL2O15211 777 aa18.87■□□□□ 0.61
COMMD4-216ENST00000567023 CLEC4GQ6UXB4 293 aa18.87■□□□□ 0.61
COMMD4-216ENST00000567023 DZIP3Q86Y13 1208 aaKnown RBP18.87■□□□□ 0.61
COMMD4-216ENST00000567023 CARMIL3Q8ND23 1372 aa18.87■□□□□ 0.61
COMMD4-216ENST00000567023 BRIP1Q9BX63 1249 aa18.87■□□□□ 0.61
COMMD4-216ENST00000567023 DLG5Q8TDM6 1919 aa18.86■□□□□ 0.61
COMMD4-216ENST00000567023 H0YIN7 160 aa18.86■□□□□ 0.61
COMMD4-216ENST00000567023 KIF3CO14782 793 aa18.86■□□□□ 0.61
COMMD4-216ENST00000567023 SETDB2Q96T68 719 aa18.86■□□□□ 0.61
COMMD4-216ENST00000567023 DLEC1Q9Y238 1755 aa18.86■□□□□ 0.61
COMMD4-216ENST00000567023 NBPF26B4DH59 902 aa18.85■□□□□ 0.61
COMMD4-216ENST00000567023 DDX10Q13206 875 aaKnown RBP18.85■□□□□ 0.61
COMMD4-216ENST00000567023 C9orf131Q5VYM1 1079 aa18.85■□□□□ 0.61
COMMD4-216ENST00000567023 PRR5LQ6MZQ0 368 aa18.85■□□□□ 0.61
COMMD4-216ENST00000567023 NBPF10Q6P3W6 841 aaKnown RBP18.85■□□□□ 0.61
COMMD4-216ENST00000567023 C2CD5Q86YS7 1000 aa18.85■□□□□ 0.61
COMMD4-216ENST00000567023 NBPF15Q8N660 670 aa18.85■□□□□ 0.61
COMMD4-216ENST00000567023 TTLL6Q8N841 843 aa18.85■□□□□ 0.61
COMMD4-216ENST00000567023 MIS18AQ9NYP9 233 aa18.85■□□□□ 0.61
COMMD4-216ENST00000567023 MAPK8IP3Q9UPT6 1336 aa18.84■□□□□ 0.61
COMMD4-216ENST00000567023 PDE6BP35913 854 aa18.84■□□□□ 0.61
COMMD4-216ENST00000567023 PIP4K2AP48426 406 aaPredicted RBP18.84■□□□□ 0.61
COMMD4-216ENST00000567023 BCORQ6W2J9 1755 aa18.83■□□□□ 0.61
COMMD4-216ENST00000567023 EIF4A1P60842 406 aaKnown RBP18.82■□□□□ 0.6
COMMD4-216ENST00000567023 ZNF652Q9Y2D9 606 aa18.82■□□□□ 0.6
COMMD4-216ENST00000567023 SBF1O95248 1867 aa18.82■□□□□ 0.6
COMMD4-216ENST00000567023 ANKRD31Q8N7Z5 1873 aa18.82■□□□□ 0.6
COMMD4-216ENST00000567023 KDM3BQ7LBC6 1761 aa18.81■□□□□ 0.6
COMMD4-216ENST00000567023 MYBBP1AQ9BQG0 1328 aaKnown RBP18.81■□□□□ 0.6
COMMD4-216ENST00000567023 CNBD1Q8NA66 436 aa18.81■□□□□ 0.6
COMMD4-216ENST00000567023 THUMPD2Q9BTF0 503 aaKnown RBP18.81■□□□□ 0.6
COMMD4-216ENST00000567023 RNF181Q9P0P0 153 aa18.8■□□□□ 0.6
COMMD4-216ENST00000567023 ZC3H4Q9UPT8 1303 aaKnown RBP18.79■□□□□ 0.6
COMMD4-216ENST00000567023 ST5P78524 1137 aa18.79■□□□□ 0.6
COMMD4-216ENST00000567023 LAMB4A4D0S4 1761 aa18.78■□□□□ 0.6
COMMD4-216ENST00000567023 TOMM70O94826 608 aa18.78■□□□□ 0.6
COMMD4-216ENST00000567023 LMNB1P20700 586 aa18.78■□□□□ 0.6
COMMD4-216ENST00000567023 RIPK4P57078 832 aa18.78■□□□□ 0.6
COMMD4-216ENST00000567023 CCDC24Q8N4L8 307 aa18.78■□□□□ 0.6
COMMD4-216ENST00000567023 ZNF622Q969S3 477 aaKnown RBP eCLIP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms