RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 MRC1P22897 1456 aa21.13■□□□□ 0.97
PALB2-205ENST00000567003 ZPR1O75312 459 aa21.13■□□□□ 0.97
PALB2-205ENST00000567003 HMOX1P09601 288 aa21.13■□□□□ 0.97
PALB2-205ENST00000567003 PCNTO95613 3336 aa21.12■□□□□ 0.97
PALB2-205ENST00000567003 TNRC6CQ9HCJ0 1690 aaKnown RBP21.12■□□□□ 0.97
PALB2-205ENST00000567003 CLSPNQ9HAW4 1339 aa21.12■□□□□ 0.97
PALB2-205ENST00000567003 RNMTO43148 476 aaKnown RBP21.12■□□□□ 0.97
PALB2-205ENST00000567003 CYP19A1P11511 503 aaPredicted RBP21.12■□□□□ 0.97
PALB2-205ENST00000567003 NFIXQ14938 502 aa21.12■□□□□ 0.97
PALB2-205ENST00000567003 ZBTB1Q9Y2K1 713 aa21.12■□□□□ 0.97
PALB2-205ENST00000567003 KNSTRNQ9Y448 316 aa21.12■□□□□ 0.97
PALB2-205ENST00000567003 COL15A1P39059 1388 aa21.11■□□□□ 0.97
PALB2-205ENST00000567003 KDM2BQ8NHM5 1336 aa21.11■□□□□ 0.97
PALB2-205ENST00000567003 NRXN2Q9P2S2 1712 aa21.11■□□□□ 0.97
PALB2-205ENST00000567003 BCL2L12Q9HB09 334 aa21.1■□□□□ 0.97
PALB2-205ENST00000567003 DLEC1Q9Y238 1755 aa21.1■□□□□ 0.97
PALB2-205ENST00000567003 PRELPP51888 382 aa21.09■□□□□ 0.97
PALB2-205ENST00000567003 AMER1Q5JTC6 1135 aaPredicted RBP21.09■□□□□ 0.97
PALB2-205ENST00000567003 KLRG1Q96E93 195 aa21.09■□□□□ 0.97
PALB2-205ENST00000567003 NARFQ9UHQ1 456 aa21.09■□□□□ 0.97
PALB2-205ENST00000567003 CARMIL3Q8ND23 1372 aa21.09■□□□□ 0.97
PALB2-205ENST00000567003 FSTL1Q12841 308 aa21.08■□□□□ 0.97
PALB2-205ENST00000567003 MTHFSDQ2M296 383 aaKnown RBP21.07■□□□□ 0.96
PALB2-205ENST00000567003 UBR2Q8IWV8 1755 aa21.07■□□□□ 0.96
PALB2-205ENST00000567003 CCDC88AQ3V6T2 1871 aa21.07■□□□□ 0.96
PALB2-205ENST00000567003 TIAM2Q8IVF5 1701 aa21.07■□□□□ 0.96
PALB2-205ENST00000567003 SERPINB2P05120 415 aa21.06■□□□□ 0.96
PALB2-205ENST00000567003 CANXP27824 592 aaKnown RBP21.05■□□□□ 0.96
PALB2-205ENST00000567003 BICDL1Q6ZP65 573 aa21.05■□□□□ 0.96
PALB2-205ENST00000567003 C2CD5Q86YS7 1000 aa21.04■□□□□ 0.96
PALB2-205ENST00000567003 ANKRD31Q8N7Z5 1873 aa21.03■□□□□ 0.96
PALB2-205ENST00000567003 LMNB1P20700 586 aa21.02■□□□□ 0.96
PALB2-205ENST00000567003 COL13A1Q5TAT6 717 aaPredicted RBP21.02■□□□□ 0.96
PALB2-205ENST00000567003 JMYQ8N9B5 988 aa21.02■□□□□ 0.96
PALB2-205ENST00000567003 SMC1BQ8NDV3 1235 aa21.02■□□□□ 0.96
PALB2-205ENST00000567003 KIF7Q2M1P5 1343 aa21.02■□□□□ 0.95
PALB2-205ENST00000567003 NFKBIEO00221 500 aa21.01■□□□□ 0.95
PALB2-205ENST00000567003 CC2D1BQ5T0F9 858 aaKnown RBP21.01■□□□□ 0.95
PALB2-205ENST00000567003 PPP4R3CPQ6ZMV5 832 aa21.01■□□□□ 0.95
PALB2-205ENST00000567003 CCDC24Q8N4L8 307 aa21.01■□□□□ 0.95
PALB2-205ENST00000567003 TTLL6Q8N841 843 aa21.01■□□□□ 0.95
PALB2-205ENST00000567003 COL11A2P13942 1736 aaPredicted RBP21.01■□□□□ 0.95
PALB2-205ENST00000567003 ZNF219Q9P2Y4 722 aaPredicted RBP21■□□□□ 0.95
PALB2-205ENST00000567003 SCN7AQ01118 1682 aa20.99■□□□□ 0.95
PALB2-205ENST00000567003 H0YIN7 160 aa20.99■□□□□ 0.95
PALB2-205ENST00000567003 DIAPH1O60610 1272 aaKnown RBP20.99■□□□□ 0.95
PALB2-205ENST00000567003 CNGB1Q14028 1251 aaPredicted RBP20.99■□□□□ 0.95
PALB2-205ENST00000567003 VSIG10Q8N0Z9 540 aa20.99■□□□□ 0.95
PALB2-205ENST00000567003 ZC3H4Q9UPT8 1303 aaKnown RBP20.99■□□□□ 0.95
PALB2-205ENST00000567003 GLTPD2A6NH11 291 aa20.98■□□□□ 0.95
PALB2-205ENST00000567003 EIF5P55010 431 aaKnown RBP20.98■□□□□ 0.95
PALB2-205ENST00000567003 TBC1D9BQ66K14 1250 aa20.98■□□□□ 0.95
PALB2-205ENST00000567003 ZNF330Q9Y3S2 320 aaPredicted RBP20.98■□□□□ 0.95
PALB2-205ENST00000567003 COL3A1P02461 1466 aaPredicted RBP20.97■□□□□ 0.95
PALB2-205ENST00000567003 TTC5Q8N0Z6 440 aa20.97■□□□□ 0.95
PALB2-205ENST00000567003 ZNF496Q96IT1 587 aaPredicted RBP20.97■□□□□ 0.95
PALB2-205ENST00000567003 SIPA1L3O60292 1781 aaPredicted RBP20.97■□□□□ 0.95
PALB2-205ENST00000567003 STARD3NLO95772 234 aa20.96■□□□□ 0.95
PALB2-205ENST00000567003 VEGFAP15692 232 aaPredicted RBP20.96■□□□□ 0.95
PALB2-205ENST00000567003 ZNF622Q969S3 477 aaKnown RBP eCLIP20.96■□□□□ 0.954e-6■□□□□ 9.9
PALB2-205ENST00000567003 TBC1D2BQ9UPU7 963 aa20.96■□□□□ 0.95
PALB2-205ENST00000567003 CACNA1SQ13698 1873 aa20.95■□□□□ 0.94
PALB2-205ENST00000567003 CAPN15O75808 1086 aa20.95■□□□□ 0.94
PALB2-205ENST00000567003 HEG1Q9ULI3 1381 aa20.95■□□□□ 0.94
PALB2-205ENST00000567003 POTECB2RU33 542 aa20.94■□□□□ 0.94
PALB2-205ENST00000567003 C21orf2O43822 256 aa20.94■□□□□ 0.94
PALB2-205ENST00000567003 PRR5LQ6MZQ0 368 aa20.94■□□□□ 0.94
PALB2-205ENST00000567003 IL17REQ8NFR9 667 aa20.94■□□□□ 0.94
PALB2-205ENST00000567003 CCER1Q8TC90 406 aaPredicted RBP20.94■□□□□ 0.94
PALB2-205ENST00000567003 FER1L6Q2WGJ9 1857 aa20.93■□□□□ 0.94
PALB2-205ENST00000567003 A0A087WZG4 1122 aa20.93■□□□□ 0.94
PALB2-205ENST00000567003 U2SURPO15042 1029 aaKnown RBP20.93■□□□□ 0.94
PALB2-205ENST00000567003 PER1O15534 1290 aaPredicted RBP20.93■□□□□ 0.94
PALB2-205ENST00000567003 DICER1Q9UPY3 1922 aaKnown RBP20.93■□□□□ 0.94
PALB2-205ENST00000567003 TEFQ10587 303 aa20.92■□□□□ 0.94
PALB2-205ENST00000567003 ZNF790Q6PG37 636 aa20.92■□□□□ 0.94
PALB2-205ENST00000567003 KCNQ3O43525 872 aa20.91■□□□□ 0.94
PALB2-205ENST00000567003 A1BGP04217 495 aa20.91■□□□□ 0.94
PALB2-205ENST00000567003 SLX4Q8IY92 1834 aa20.91■□□□□ 0.94
PALB2-205ENST00000567003 GNAT3A8MTJ3 354 aa20.9■□□□□ 0.94
PALB2-205ENST00000567003 KCNA4P22459 653 aa20.9■□□□□ 0.94
PALB2-205ENST00000567003 BRIP1Q9BX63 1249 aa20.9■□□□□ 0.94
PALB2-205ENST00000567003 BCORQ6W2J9 1755 aa20.9■□□□□ 0.94
PALB2-205ENST00000567003 HSPA1AP0DMV8 641 aaKnown RBP20.89■□□□□ 0.93
PALB2-205ENST00000567003 HSPA1BP0DMV9 641 aaKnown RBP20.89■□□□□ 0.93
PALB2-205ENST00000567003 PDE6BP35913 854 aa20.89■□□□□ 0.93
PALB2-205ENST00000567003 PIP4K2AP48426 406 aaPredicted RBP20.89■□□□□ 0.93
PALB2-205ENST00000567003 TNS4Q8IZW8 715 aa20.89■□□□□ 0.93
PALB2-205ENST00000567003 CAMTA2O94983 1202 aa20.88■□□□□ 0.93
PALB2-205ENST00000567003 IL6STP40189 918 aaPredicted RBP20.88■□□□□ 0.93
PALB2-205ENST00000567003 ERFEQ4G0M1 354 aa20.88■□□□□ 0.93
PALB2-205ENST00000567003 GAS2L2Q8NHY3 880 aa20.88■□□□□ 0.93
PALB2-205ENST00000567003 POTEIP0CG38 1075 aa20.87■□□□□ 0.93
PALB2-205ENST00000567003 POTEJP0CG39 1038 aa20.87■□□□□ 0.93
PALB2-205ENST00000567003 CNBD1Q8NA66 436 aa20.87■□□□□ 0.93
PALB2-205ENST00000567003 FMNL2Q96PY5 1086 aa20.87■□□□□ 0.93
PALB2-205ENST00000567003 PHACTR3Q96KR7 559 aa20.86■□□□□ 0.93
PALB2-205ENST00000567003 TEX13AQ9BXU3 409 aaPredicted RBP20.86■□□□□ 0.93
PALB2-205ENST00000567003 ARFGEF2Q9Y6D5 1785 aa20.85■□□□□ 0.93
PALB2-205ENST00000567003 PRAMEF22A3QJZ6 481 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms