RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 WASHC4Q2M389 1173 aa5.12□□□□□ -1.59
LPCAT2-208ENST00000566915 SNX21Q969T3 373 aa5.12□□□□□ -1.59
LPCAT2-208ENST00000566915 KIF1BPQ96EK5 621 aa5.12□□□□□ -1.59
LPCAT2-208ENST00000566915 ANO10Q9NW15 660 aa5.12□□□□□ -1.59
LPCAT2-208ENST00000566915 CEP131Q9UPN4 1083 aa5.12□□□□□ -1.59
LPCAT2-208ENST00000566915 BCORL1Q5H9F3 1711 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 SERPINC1P01008 464 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 MAP9Q49MG5 647 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 NCBP3Q53F19 620 aaKnown RBP5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 AMER1Q5JTC6 1135 aaPredicted RBP5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 HDGFL1Q5TGJ6 251 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 KIF18AQ8NI77 898 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 UBXN4Q92575 508 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 TBC1D32Q96NH3 1257 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 PDRG1Q9NUG6 133 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 CALCOCO1Q9P1Z2 691 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 SETD1BQ9UPS6 1966 aaKnown RBP5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 WASLO00401 505 aaPredicted RBP5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 KIAA0754O94854 1291 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 ZRSR2Q15696 482 aaKnown RBP5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 VPS37DQ86XT2 251 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 CCDC83Q8IWF9 413 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 PDILTQ8N807 584 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 NUDT16Q96DE0 195 aaKnown RBP5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 EPS15P42566 896 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 TMEM132EQ6IEE7 984 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 UPF3BQ9BZI7 483 aaKnown RBP5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 IQSEC2Q5JU85 1478 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 NSD3Q9BZ95 1437 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 TTC21AQ8NDW8 1320 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 ANAPC15P60006 121 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 NEUROD6Q96NK8 337 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 PHAXQ9H814 394 aaKnown RBP5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 ZRANB1Q9UGI0 708 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 USP21Q9UK80 565 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 SPG7Q9UQ90 795 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 PAXBP1Q9Y5B6 917 aa5.11□□□□□ -1.59
LPCAT2-208ENST00000566915 DUSP27Q5VZP5 1158 aa5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 TMCO3Q6UWJ1 677 aa5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 PYM1Q9BRP8 204 aaKnown RBP5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 TRIM34Q9BYJ4 488 aa5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 GNL3LQ9NVN8 582 aaKnown RBP5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 INO80Q9ULG1 1556 aaPredicted RBP5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 ME1P48163 572 aa5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 NAP1L1P55209 391 aaKnown RBP5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 PTPN14Q15678 1187 aa5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 SLC12A5Q9H2X9 1139 aa5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 TCEAL9Q9UHQ7 104 aa5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 CDC42BPAQ5VT25 1732 aa5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 COL17A1Q9UMD9 1497 aaPredicted RBP5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 SFPQP23246 707 aaKnown RBP eCLIP5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 CCDC57Q2TAC2 916 aa5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 VPS53Q5VIR6 699 aa5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 TBC1D2Q9BYX2 928 aa5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 CLTCQ00610 1675 aaKnown RBP5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 PREX1Q8TCU6 1659 aa5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 MX1P20591 662 aa5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 TMEM57Q8N5G2 664 aa5.1□□□□□ -1.59
LPCAT2-208ENST00000566915 ADGRB3O60242 1522 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 ANKRD36BQ8N2N9 1353 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 FOXO3O43524 673 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 CT47A1Q5JQC4 288 aaPredicted RBP5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 CCAR1Q8IX12 1150 aaKnown RBP5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 CCDC148Q8NFR7 591 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 TSR2Q969E8 191 aaKnown RBP5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 FMNL2Q96PY5 1086 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 LIMCH1Q9UPQ0 1083 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 U3KPZ7 1027 aaPredicted RBP5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 LMTK2Q8IWU2 1503 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 ABCA6Q8N139 1617 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 EXOC5O00471 708 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 POLD1P28340 1107 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 TERF1P54274 439 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 IMMTQ16891 758 aaKnown RBP5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 CCDC184Q52MB2 194 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 ANKRD18AQ8IVF6 992 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 DEF6Q9H4E7 631 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 HMG20BQ9P0W2 317 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 CCDC196A0A1B0GTZ2 297 aa5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 RBM6P78332 1123 aaKnown RBP5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 AXDND1Q5T1B0 1012 aaPredicted RBP5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 TNPO1Q92973 898 aaKnown RBP5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 CCDC43Q96MW1 224 aaKnown RBP5.09□□□□□ -1.59
LPCAT2-208ENST00000566915 SOS1Q07889 1333 aaPredicted RBP5.09□□□□□ -1.6
LPCAT2-208ENST00000566915 TUBBP07437 444 aa5.09□□□□□ -1.6
LPCAT2-208ENST00000566915 ODF2Q5BJF6 829 aa5.09□□□□□ -1.6
LPCAT2-208ENST00000566915 JAKMIP3Q5VZ66 844 aa5.09□□□□□ -1.6
LPCAT2-208ENST00000566915 SULT6B1Q6IMI4 303 aa5.09□□□□□ -1.6
LPCAT2-208ENST00000566915 KIF6Q6ZMV9 814 aa5.09□□□□□ -1.6
LPCAT2-208ENST00000566915 CCDC171Q6TFL3 1326 aa5.08□□□□□ -1.6
LPCAT2-208ENST00000566915 TET3O43151 1660 aa5.08□□□□□ -1.6
LPCAT2-208ENST00000566915 PARD3Q8TEW0 1356 aa5.08□□□□□ -1.6
LPCAT2-208ENST00000566915 UBE2HP62256 183 aa5.08□□□□□ -1.6
LPCAT2-208ENST00000566915 CCDC181Q5TID7 509 aa5.08□□□□□ -1.6
LPCAT2-208ENST00000566915 SYTL4Q96C24 671 aaPredicted RBP5.08□□□□□ -1.6
LPCAT2-208ENST00000566915 CDK5RAP3Q96JB5 506 aa5.08□□□□□ -1.6
LPCAT2-208ENST00000566915 JAKMIP1Q96N16 626 aaKnown RBP5.08□□□□□ -1.6
LPCAT2-208ENST00000566915 TTC21BQ7Z4L5 1316 aa5.08□□□□□ -1.6
LPCAT2-208ENST00000566915 DIP2AQ14689 1571 aa5.08□□□□□ -1.6
LPCAT2-208ENST00000566915 SYCE3A1L190 88 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms