RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 UBR2Q8IWV8 1755 aa16.03■□□□□ 0.16
CFDP1-207ENST00000566901 KCNQ2O43526 872 aa16.02■□□□□ 0.16
CFDP1-207ENST00000566901 CABP4P57796 275 aa16.02■□□□□ 0.16
CFDP1-207ENST00000566901 MRPL50Q8N5N7 158 aaKnown RBP16.02■□□□□ 0.16
CFDP1-207ENST00000566901 ARHGAP45Q92619 1136 aa16.02■□□□□ 0.16
CFDP1-207ENST00000566901 CACNA1FO60840 1977 aa16.02■□□□□ 0.15
CFDP1-207ENST00000566901 IPO8O15397 1037 aaKnown RBP16.01■□□□□ 0.15
CFDP1-207ENST00000566901 ZKSCAN2Q63HK3 967 aa16.01■□□□□ 0.15
CFDP1-207ENST00000566901 ZNF790Q6PG37 636 aa16.01■□□□□ 0.15
CFDP1-207ENST00000566901 DDX54Q8TDD1 881 aaKnown RBP16.01■□□□□ 0.15
CFDP1-207ENST00000566901 CANXP27824 592 aaKnown RBP16■□□□□ 0.15
CFDP1-207ENST00000566901 KRT24Q2M2I5 525 aa16■□□□□ 0.15
CFDP1-207ENST00000566901 NFATC2IPQ8NCF5 419 aa16■□□□□ 0.15
CFDP1-207ENST00000566901 ELL2O00472 640 aaPredicted RBP15.99■□□□□ 0.15
CFDP1-207ENST00000566901 PLIN1O60240 522 aa15.99■□□□□ 0.15
CFDP1-207ENST00000566901 CCDC30Q5VVM6 783 aa15.99■□□□□ 0.15
CFDP1-207ENST00000566901 BCL2L13Q9BXK5 485 aa15.99■□□□□ 0.15
CFDP1-207ENST00000566901 ANO8Q9HCE9 1232 aaPredicted RBP15.99■□□□□ 0.15
CFDP1-207ENST00000566901 BCL9O00512 1426 aa15.99■□□□□ 0.15
CFDP1-207ENST00000566901 DOT1LQ8TEK3 1739 aa15.99■□□□□ 0.15
CFDP1-207ENST00000566901 LAMB4A4D0S4 1761 aa15.98■□□□□ 0.15
CFDP1-207ENST00000566901 CASZ1Q86V15 1759 aa15.98■□□□□ 0.15
CFDP1-207ENST00000566901 IRX6P78412 446 aaPredicted RBP15.98■□□□□ 0.15
CFDP1-207ENST00000566901 ATF7IPQ6VMQ6 1270 aa15.98■□□□□ 0.15
CFDP1-207ENST00000566901 TTC5Q8N0Z6 440 aa15.98■□□□□ 0.15
CFDP1-207ENST00000566901 ZBTB12Q9Y330 459 aaPredicted RBP15.98■□□□□ 0.15
CFDP1-207ENST00000566901 ITGB4P16144 1822 aa15.98■□□□□ 0.15
CFDP1-207ENST00000566901 KCPQ6ZWJ8 1503 aa15.98■□□□□ 0.15
CFDP1-207ENST00000566901 PTPRCP08575 1304 aa15.97■□□□□ 0.15
CFDP1-207ENST00000566901 KCNQ3O43525 872 aa15.97■□□□□ 0.15
CFDP1-207ENST00000566901 GIGYF1O75420 1035 aaPredicted RBP15.97■□□□□ 0.15
CFDP1-207ENST00000566901 AAMPQ13685 434 aa15.97■□□□□ 0.15
CFDP1-207ENST00000566901 PTF1AQ7RTS3 328 aa15.97■□□□□ 0.15
CFDP1-207ENST00000566901 MARCH10Q8NA82 808 aaPredicted RBP15.97■□□□□ 0.15
CFDP1-207ENST00000566901 STK31Q9BXU1 1019 aa15.97■□□□□ 0.15
CFDP1-207ENST00000566901 TMOD3Q9NYL9 352 aa15.97■□□□□ 0.15
CFDP1-207ENST00000566901 PLSCR1O15162 318 aa15.96■□□□□ 0.15
CFDP1-207ENST00000566901 ZBTB7AO95365 584 aa15.96■□□□□ 0.15
CFDP1-207ENST00000566901 HDGFL1Q5TGJ6 251 aa15.96■□□□□ 0.15
CFDP1-207ENST00000566901 FRAT1Q92837 279 aaPredicted RBP15.96■□□□□ 0.15
CFDP1-207ENST00000566901 FMNL2Q96PY5 1086 aa15.96■□□□□ 0.15
CFDP1-207ENST00000566901 API5Q9BZZ5 524 aaKnown RBP15.96■□□□□ 0.15
CFDP1-207ENST00000566901 PPP4R2Q9NY27 417 aa15.96■□□□□ 0.15
CFDP1-207ENST00000566901 STK32BQ9NY57 414 aa15.96■□□□□ 0.15
CFDP1-207ENST00000566901 C5P01031 1676 aa15.95■□□□□ 0.14
CFDP1-207ENST00000566901 TRIM27P14373 513 aa15.95■□□□□ 0.14
CFDP1-207ENST00000566901 C20orf194Q5TEA3 1177 aa15.95■□□□□ 0.14
CFDP1-207ENST00000566901 DZIP1LQ8IYY4 767 aaKnown RBP15.95■□□□□ 0.14
CFDP1-207ENST00000566901 NOB1Q9ULX3 412 aaKnown RBP15.95■□□□□ 0.14
CFDP1-207ENST00000566901 CICQ96RK0 1608 aaPredicted RBP15.94■□□□□ 0.14
CFDP1-207ENST00000566901 CRBNQ96SW2 442 aa15.94■□□□□ 0.14
CFDP1-207ENST00000566901 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
CFDP1-207ENST00000566901 ABCC4O15439 1325 aa15.94■□□□□ 0.14
CFDP1-207ENST00000566901 ERBB4Q15303 1308 aa15.94■□□□□ 0.14
CFDP1-207ENST00000566901 PXDNLA1KZ92 1463 aa15.93■□□□□ 0.14
CFDP1-207ENST00000566901 SNRPA1P09661 255 aaKnown RBP15.93■□□□□ 0.14
CFDP1-207ENST00000566901 SLC39A6Q13433 755 aa15.93■□□□□ 0.14
CFDP1-207ENST00000566901 FTSJ3Q8IY81 847 aaKnown RBP15.93■□□□□ 0.14
CFDP1-207ENST00000566901 EXOC6Q8TAG9 804 aa15.93■□□□□ 0.14
CFDP1-207ENST00000566901 ZNF496Q96IT1 587 aaPredicted RBP15.93■□□□□ 0.14
CFDP1-207ENST00000566901 N4BP2Q86UW6 1770 aaPredicted RBP15.92■□□□□ 0.14
CFDP1-207ENST00000566901 NHSQ6T4R5 1651 aa15.92■□□□□ 0.14
CFDP1-207ENST00000566901 VSIG10Q8N0Z9 540 aa15.92■□□□□ 0.14
CFDP1-207ENST00000566901 PIGBQ92521 554 aa15.92■□□□□ 0.14
CFDP1-207ENST00000566901 MVPQ14764 893 aaKnown RBP15.91■□□□□ 0.14
CFDP1-207ENST00000566901 TXNRD1Q16881 649 aa15.91■□□□□ 0.14
CFDP1-207ENST00000566901 PANK1Q8TE04 598 aa15.91■□□□□ 0.14
CFDP1-207ENST00000566901 ACSBG1Q96GR2 724 aa15.91■□□□□ 0.14
CFDP1-207ENST00000566901 PDGFDQ9GZP0 370 aaPredicted RBP15.91■□□□□ 0.14
CFDP1-207ENST00000566901 DBF4Q9UBU7 674 aaPredicted RBP15.91■□□□□ 0.14
CFDP1-207ENST00000566901 BTAF1O14981 1849 aa15.9■□□□□ 0.14
CFDP1-207ENST00000566901 RLBP1P12271 317 aa15.9■□□□□ 0.14
CFDP1-207ENST00000566901 ZNF831Q5JPB2 1677 aa15.89■□□□□ 0.13
CFDP1-207ENST00000566901 FLIIQ13045 1269 aa15.89■□□□□ 0.13
CFDP1-207ENST00000566901 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
CFDP1-207ENST00000566901 CHMP4BQ9H444 224 aaKnown RBP15.89■□□□□ 0.13
CFDP1-207ENST00000566901 DDX21Q9NR30 783 aaKnown RBP eCLIP15.89■□□□□ 0.13
CFDP1-207ENST00000566901 DDX19BQ9UMR2 479 aa15.89■□□□□ 0.13
CFDP1-207ENST00000566901 TCERG1O14776 1098 aaKnown RBP15.88■□□□□ 0.13
CFDP1-207ENST00000566901 PROM2Q8N271 834 aa15.88■□□□□ 0.13
CFDP1-207ENST00000566901 TEX13AQ9BXU3 409 aaPredicted RBP15.88■□□□□ 0.13
CFDP1-207ENST00000566901 ATG3Q9NT62 314 aa15.88■□□□□ 0.13
CFDP1-207ENST00000566901 HYPKQ9NX55 129 aa15.88■□□□□ 0.13
CFDP1-207ENST00000566901 CHD4Q14839 1912 aa15.88■□□□□ 0.13
CFDP1-207ENST00000566901 EIF2S2P20042 333 aaKnown RBP15.87■□□□□ 0.13
CFDP1-207ENST00000566901 PRIM1P49642 420 aaKnown RBP15.87■□□□□ 0.13
CFDP1-207ENST00000566901 SLC15A2Q16348 729 aa15.87■□□□□ 0.13
CFDP1-207ENST00000566901 INTS3Q68E01 1043 aaKnown RBP15.87■□□□□ 0.13
CFDP1-207ENST00000566901 CHPF2Q9P2E5 772 aa15.87■□□□□ 0.13
CFDP1-207ENST00000566901 TNNQ9UQP3 1299 aa15.87■□□□□ 0.13
CFDP1-207ENST00000566901 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
CFDP1-207ENST00000566901 TMEM57Q8N5G2 664 aa15.86■□□□□ 0.13
CFDP1-207ENST00000566901 SMARCC1Q92922 1105 aaPredicted RBP15.86■□□□□ 0.13
CFDP1-207ENST00000566901 CLUAP1Q96AJ1 413 aa15.86■□□□□ 0.13
CFDP1-207ENST00000566901 IBTKQ9P2D0 1353 aaPredicted RBP15.86■□□□□ 0.13
CFDP1-207ENST00000566901 PRAMEF22A3QJZ6 481 aa15.85■□□□□ 0.13
CFDP1-207ENST00000566901 PDIA6Q15084 440 aa15.85■□□□□ 0.13
CFDP1-207ENST00000566901 G2E3Q7L622 706 aa15.85■□□□□ 0.13
CFDP1-207ENST00000566901 ASAP1Q9ULH1 1129 aa15.85■□□□□ 0.13
CFDP1-207ENST00000566901 TJP1Q07157 1748 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms