RNA–Protein interactions for RNA: ENST00000566828.5

EDC3-212, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-212ENST00000566828 TM4SF1P30408 202 aa22.11■■□□□ 1.13
EDC3-212ENST00000566828 COL11A2P13942 1736 aaPredicted RBP22.11■■□□□ 1.13
EDC3-212ENST00000566828 ANKRD31Q8N7Z5 1873 aa22.11■■□□□ 1.13
EDC3-212ENST00000566828 ZPR1O75312 459 aa22.1■■□□□ 1.13
EDC3-212ENST00000566828 JMYQ8N9B5 988 aa22.1■■□□□ 1.13
EDC3-212ENST00000566828 CACNA1SQ13698 1873 aa22.09■■□□□ 1.13
EDC3-212ENST00000566828 TIMELESSQ9UNS1 1208 aa22.09■■□□□ 1.13
EDC3-212ENST00000566828 TRIM26Q12899 539 aaPredicted RBP22.08■■□□□ 1.13
EDC3-212ENST00000566828 COL13A1Q5TAT6 717 aaPredicted RBP22.08■■□□□ 1.13
EDC3-212ENST00000566828 SLC52A2Q9HAB3 445 aa22.08■■□□□ 1.13
EDC3-212ENST00000566828 CARMIL3Q8ND23 1372 aa22.08■■□□□ 1.12
EDC3-212ENST00000566828 HSPA5P11021 654 aaKnown RBP22.07■■□□□ 1.12
EDC3-212ENST00000566828 IL13P35225 146 aa22.07■■□□□ 1.12
EDC3-212ENST00000566828 NFIXQ14938 502 aa22.07■■□□□ 1.12
EDC3-212ENST00000566828 AKAP4Q5JQC9 854 aa22.07■■□□□ 1.12
EDC3-212ENST00000566828 SMC1BQ8NDV3 1235 aa22.07■■□□□ 1.12
EDC3-212ENST00000566828 ZBTB1Q9Y2K1 713 aa22.07■■□□□ 1.12
EDC3-212ENST00000566828 ZC3H4Q9UPT8 1303 aaKnown RBP22.06■■□□□ 1.12
EDC3-212ENST00000566828 CYP19A1P11511 503 aaPredicted RBP22.06■■□□□ 1.12
EDC3-212ENST00000566828 SLC39A6Q13433 755 aa22.06■■□□□ 1.12
EDC3-212ENST00000566828 DICER1Q9UPY3 1922 aaKnown RBP22.06■■□□□ 1.12
EDC3-212ENST00000566828 PRELPP51888 382 aa22.05■■□□□ 1.12
EDC3-212ENST00000566828 EIF4G2P78344 907 aaKnown RBP eCLIP22.05■■□□□ 1.12
EDC3-212ENST00000566828 LGR6Q9HBX8 967 aa22.05■■□□□ 1.12
EDC3-212ENST00000566828 NARFQ9UHQ1 456 aa22.04■■□□□ 1.12
EDC3-212ENST00000566828 FER1L6Q2WGJ9 1857 aa22.03■■□□□ 1.12
EDC3-212ENST00000566828 SIPA1L3O60292 1781 aaPredicted RBP22.03■■□□□ 1.12
EDC3-212ENST00000566828 BCL2L12Q9HB09 334 aa22.03■■□□□ 1.12
EDC3-212ENST00000566828 RNMTO43148 476 aaKnown RBP22.02■■□□□ 1.12
EDC3-212ENST00000566828 CAPN15O75808 1086 aa22.02■■□□□ 1.12
EDC3-212ENST00000566828 LMNB1P20700 586 aa22.02■■□□□ 1.12
EDC3-212ENST00000566828 SERPINB2P05120 415 aa22.01■■□□□ 1.11
EDC3-212ENST00000566828 HMOX1P09601 288 aa22.01■■□□□ 1.11
EDC3-212ENST00000566828 PCNTO95613 3336 aa22■■□□□ 1.11
EDC3-212ENST00000566828 BCORQ6W2J9 1755 aa22■■□□□ 1.11
EDC3-212ENST00000566828 ARFGEF2Q9Y6D5 1785 aa22■■□□□ 1.11
EDC3-212ENST00000566828 GLTPD2A6NH11 291 aa22■■□□□ 1.11
EDC3-212ENST00000566828 C2CD5Q86YS7 1000 aa22■■□□□ 1.11
EDC3-212ENST00000566828 NFKBIEO00221 500 aa21.99■■□□□ 1.11
EDC3-212ENST00000566828 TTLL6Q8N841 843 aa21.99■■□□□ 1.11
EDC3-212ENST00000566828 KNSTRNQ9Y448 316 aa21.99■■□□□ 1.11
EDC3-212ENST00000566828 VEGFAP15692 232 aaPredicted RBP21.98■■□□□ 1.11
EDC3-212ENST00000566828 CANXP27824 592 aaKnown RBP21.98■■□□□ 1.11
EDC3-212ENST00000566828 BICDL1Q6ZP65 573 aa21.98■■□□□ 1.11
EDC3-212ENST00000566828 TNS4Q8IZW8 715 aa21.98■■□□□ 1.11
EDC3-212ENST00000566828 CLSPNQ9HAW4 1339 aa21.98■■□□□ 1.11
EDC3-212ENST00000566828 MTHFSDQ2M296 383 aaKnown RBP21.96■■□□□ 1.11
EDC3-212ENST00000566828 H0YIN7 160 aa21.95■■□□□ 1.1
EDC3-212ENST00000566828 AMER1Q5JTC6 1135 aaPredicted RBP21.95■■□□□ 1.1
EDC3-212ENST00000566828 VSIG10Q8N0Z9 540 aa21.95■■□□□ 1.1
EDC3-212ENST00000566828 PCGF6Q9BYE7 350 aa21.95■■□□□ 1.1
EDC3-212ENST00000566828 HSPA1AP0DMV8 641 aaKnown RBP21.94■■□□□ 1.1
EDC3-212ENST00000566828 HSPA1BP0DMV9 641 aaKnown RBP21.94■■□□□ 1.1
EDC3-212ENST00000566828 SLX4Q8IY92 1834 aa21.93■■□□□ 1.1
EDC3-212ENST00000566828 ZNF219Q9P2Y4 722 aaPredicted RBP21.93■■□□□ 1.1
EDC3-212ENST00000566828 TBC1D9BQ66K14 1250 aa21.92■■□□□ 1.1
EDC3-212ENST00000566828 TTC5Q8N0Z6 440 aa21.92■■□□□ 1.1
EDC3-212ENST00000566828 CCDC24Q8N4L8 307 aa21.92■■□□□ 1.1
EDC3-212ENST00000566828 ZNF330Q9Y3S2 320 aaPredicted RBP21.92■■□□□ 1.1
EDC3-212ENST00000566828 COL3A1P02461 1466 aaPredicted RBP21.91■■□□□ 1.1
EDC3-212ENST00000566828 POTECB2RU33 542 aa21.91■■□□□ 1.1
EDC3-212ENST00000566828 EIF5P55010 431 aaKnown RBP21.91■■□□□ 1.1
EDC3-212ENST00000566828 ZNF622Q969S3 477 aaKnown RBP eCLIP21.91■■□□□ 1.1
EDC3-212ENST00000566828 HEG1Q9ULI3 1381 aa21.89■■□□□ 1.1
EDC3-212ENST00000566828 C21orf2O43822 256 aa21.89■■□□□ 1.09
EDC3-212ENST00000566828 STARD3NLO95772 234 aa21.89■■□□□ 1.09
EDC3-212ENST00000566828 A0A087WZG4 1122 aa21.88■■□□□ 1.09
EDC3-212ENST00000566828 DIAPH1O60610 1272 aaKnown RBP21.88■■□□□ 1.09
EDC3-212ENST00000566828 ERFEQ4G0M1 354 aa21.88■■□□□ 1.09
EDC3-212ENST00000566828 PRR5LQ6MZQ0 368 aa21.88■■□□□ 1.09
EDC3-212ENST00000566828 ZNF496Q96IT1 587 aaPredicted RBP21.88■■□□□ 1.09
EDC3-212ENST00000566828 DPY19L2Q6NUT2 758 aa21.87■■□□□ 1.09
EDC3-212ENST00000566828 TBC1D2BQ9UPU7 963 aa21.87■■□□□ 1.09
EDC3-212ENST00000566828 KIF7Q2M1P5 1343 aa21.86■■□□□ 1.09
EDC3-212ENST00000566828 PDE6BP35913 854 aa21.86■■□□□ 1.09
EDC3-212ENST00000566828 BRIP1Q9BX63 1249 aa21.86■■□□□ 1.09
EDC3-212ENST00000566828 SCN4AP35499 1836 aa21.85■■□□□ 1.09
EDC3-212ENST00000566828 TAOK3Q9H2K8 898 aa21.85■■□□□ 1.09
EDC3-212ENST00000566828 TEFQ10587 303 aa21.84■■□□□ 1.09
EDC3-212ENST00000566828 CC2D1BQ5T0F9 858 aaKnown RBP21.84■■□□□ 1.09
EDC3-212ENST00000566828 ZNF790Q6PG37 636 aa21.84■■□□□ 1.09
EDC3-212ENST00000566828 CNBD1Q8NA66 436 aa21.84■■□□□ 1.09
EDC3-212ENST00000566828 LTBP3Q9NS15 1303 aa21.83■■□□□ 1.09
EDC3-212ENST00000566828 NPHP1O15259 732 aa21.83■■□□□ 1.09
EDC3-212ENST00000566828 POTEIP0CG38 1075 aa21.83■■□□□ 1.09
EDC3-212ENST00000566828 POTEJP0CG39 1038 aa21.83■■□□□ 1.09
EDC3-212ENST00000566828 PDZRN3Q9UPQ7 1066 aa21.83■■□□□ 1.09
EDC3-212ENST00000566828 IL6STP40189 918 aaPredicted RBP21.82■■□□□ 1.08
EDC3-212ENST00000566828 IL17REQ8NFR9 667 aa21.82■■□□□ 1.08
EDC3-212ENST00000566828 MKRN1Q9UHC7 482 aaKnown RBP21.82■■□□□ 1.08
EDC3-212ENST00000566828 U2SURPO15042 1029 aaKnown RBP21.81■■□□□ 1.08
EDC3-212ENST00000566828 DDNO94850 711 aaPredicted RBP21.81■■□□□ 1.08
EDC3-212ENST00000566828 CHADLQ6NUI6 762 aa21.81■■□□□ 1.08
EDC3-212ENST00000566828 PRPF40BQ6NWY9 871 aaKnown RBP21.81■■□□□ 1.08
EDC3-212ENST00000566828 GNAT3A8MTJ3 354 aa21.8■■□□□ 1.08
EDC3-212ENST00000566828 CAMTA2O94983 1202 aa21.8■■□□□ 1.08
EDC3-212ENST00000566828 A1BGP04217 495 aa21.8■■□□□ 1.08
EDC3-212ENST00000566828 ST5P78524 1137 aa21.8■■□□□ 1.08
EDC3-212ENST00000566828 GAS2L2Q8NHY3 880 aa21.8■■□□□ 1.08
EDC3-212ENST00000566828 CREBZFQ9NS37 354 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms