RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 DDR1Q08345 913 aa37.08■■■■□ 3.53
UBFD1-206ENST00000566669 N4BP2Q86UW6 1770 aaPredicted RBP37.07■■■■□ 3.53
UBFD1-206ENST00000566669 POLRMTO00411 1230 aaKnown RBP37.07■■■■□ 3.52
UBFD1-206ENST00000566669 A0A087WZG4 1122 aa37.06■■■■□ 3.52
UBFD1-206ENST00000566669 ZNF790Q6PG37 636 aa37.06■■■■□ 3.52
UBFD1-206ENST00000566669 ZBTB1Q9Y2K1 713 aa37.06■■■■□ 3.52
UBFD1-206ENST00000566669 UBR2Q8IWV8 1755 aa37.05■■■■□ 3.52
UBFD1-206ENST00000566669 ARHGAP27Q6ZUM4 889 aa37.05■■■■□ 3.52
UBFD1-206ENST00000566669 IL17REQ8NFR9 667 aa37.05■■■■□ 3.52
UBFD1-206ENST00000566669 KCNA3P22001 575 aa37.04■■■■□ 3.52
UBFD1-206ENST00000566669 DALRD3Q5D0E6 543 aaKnown RBP37.04■■■■□ 3.52
UBFD1-206ENST00000566669 CEMIPQ8WUJ3 1361 aa37.03■■■■□ 3.52
UBFD1-206ENST00000566669 PRKAR2BP31323 418 aa37.01■■■■□ 3.52
UBFD1-206ENST00000566669 ZNF526Q8TF50 670 aaPredicted RBP37.01■■■■□ 3.52
UBFD1-206ENST00000566669 RSPH6AQ9H0K4 717 aa37.01■■■■□ 3.52
UBFD1-206ENST00000566669 HEG1Q9ULI3 1381 aa37.01■■■■□ 3.51
UBFD1-206ENST00000566669 FMNL2Q96PY5 1086 aa37■■■■□ 3.51
UBFD1-206ENST00000566669 BRCA1P38398 1863 aaKnown RBP36.99■■■■□ 3.51
UBFD1-206ENST00000566669 ZNF496Q96IT1 587 aaPredicted RBP36.99■■■■□ 3.51
UBFD1-206ENST00000566669 PPP2R1AP30153 589 aa36.98■■■■□ 3.51
UBFD1-206ENST00000566669 EIF5P55010 431 aaKnown RBP36.98■■■■□ 3.51
UBFD1-206ENST00000566669 NFIXQ14938 502 aa36.98■■■■□ 3.51
UBFD1-206ENST00000566669 CANXP27824 592 aaKnown RBP36.97■■■■□ 3.51
UBFD1-206ENST00000566669 NPM2Q86SE8 214 aaKnown RBP36.97■■■■□ 3.51
UBFD1-206ENST00000566669 U2AF1L5P0DN76 240 aaPredicted RBP36.96■■■■□ 3.51
UBFD1-206ENST00000566669 U2AF1Q01081 240 aaKnown RBP eCLIP36.96■■■■□ 3.51
UBFD1-206ENST00000566669 ARFGEF1Q9Y6D6 1849 aa36.95■■■■□ 3.51
UBFD1-206ENST00000566669 RTF1Q92541 710 aaKnown RBP36.95■■■■□ 3.51
UBFD1-206ENST00000566669 PHACTR3Q96KR7 559 aa36.95■■■■□ 3.51
UBFD1-206ENST00000566669 IL6STP40189 918 aaPredicted RBP36.94■■■■□ 3.5
UBFD1-206ENST00000566669 BTBD11A6QL63 1104 aa36.93■■■■□ 3.5
UBFD1-206ENST00000566669 SIPA1L3O60292 1781 aaPredicted RBP36.92■■■■□ 3.5
UBFD1-206ENST00000566669 SERPINB2P05120 415 aa36.92■■■■□ 3.5
UBFD1-206ENST00000566669 HTATSF1O43719 755 aaKnown RBP36.91■■■■□ 3.5
UBFD1-206ENST00000566669 BCL2L12Q9HB09 334 aa36.91■■■■□ 3.5
UBFD1-206ENST00000566669 PDZRN3Q9UPQ7 1066 aa36.91■■■■□ 3.5
UBFD1-206ENST00000566669 CHRNA5P30532 468 aa36.9■■■■□ 3.5
UBFD1-206ENST00000566669 NRXN2Q9P2S2 1712 aa36.88■■■■□ 3.49
UBFD1-206ENST00000566669 KIF3CO14782 793 aa36.88■■■■□ 3.49
UBFD1-206ENST00000566669 NEFMP07197 916 aa36.87■■■■□ 3.49
UBFD1-206ENST00000566669 HSPA6P17066 643 aa36.87■■■■□ 3.49
UBFD1-206ENST00000566669 C9orf131Q5VYM1 1079 aa36.86■■■■□ 3.49
UBFD1-206ENST00000566669 CEP350Q5VT06 3117 aa36.85■■■■□ 3.49
UBFD1-206ENST00000566669 H0YIN7 160 aa36.83■■■■□ 3.49
UBFD1-206ENST00000566669 TOMM70O94826 608 aa36.82■■■■□ 3.48
UBFD1-206ENST00000566669 TTLL6Q8N841 843 aa36.82■■■■□ 3.48
UBFD1-206ENST00000566669 ZC3H4Q9UPT8 1303 aaKnown RBP36.82■■■■□ 3.48
UBFD1-206ENST00000566669 CARMIL3Q8ND23 1372 aa36.81■■■■□ 3.48
UBFD1-206ENST00000566669 AFDNP55196 1824 aaKnown RBP36.81■■■■□ 3.48
UBFD1-206ENST00000566669 KDM2BQ8NHM5 1336 aa36.81■■■■□ 3.48
UBFD1-206ENST00000566669 SNRPA1P09661 255 aaKnown RBP36.8■■■■□ 3.48
UBFD1-206ENST00000566669 ZNF330Q9Y3S2 320 aaPredicted RBP36.8■■■■□ 3.48
UBFD1-206ENST00000566669 PDE6BP35913 854 aa36.79■■■■□ 3.48
UBFD1-206ENST00000566669 C2CD5Q86YS7 1000 aa36.79■■■■□ 3.48
UBFD1-206ENST00000566669 RNF181Q9P0P0 153 aa36.79■■■■□ 3.48
UBFD1-206ENST00000566669 BICDL1Q6ZP65 573 aa36.78■■■■□ 3.48
UBFD1-206ENST00000566669 BRIP1Q9BX63 1249 aa36.78■■■■□ 3.48
UBFD1-206ENST00000566669 TBC1D2BQ9UPU7 963 aa36.78■■■■□ 3.48
UBFD1-206ENST00000566669 SCN7AQ01118 1682 aa36.77■■■■□ 3.48
UBFD1-206ENST00000566669 A1BGP04217 495 aa36.77■■■■□ 3.48
UBFD1-206ENST00000566669 TBC1D9BQ66K14 1250 aa36.77■■■■□ 3.48
UBFD1-206ENST00000566669 SETDB2Q96T68 719 aa36.77■■■■□ 3.48
UBFD1-206ENST00000566669 PNNQ9H307 717 aaKnown RBP36.77■■■■□ 3.48
UBFD1-206ENST00000566669 RGL2O15211 777 aa36.76■■■■□ 3.48
UBFD1-206ENST00000566669 MCM10Q7L590 875 aa36.76■■■■□ 3.48
UBFD1-206ENST00000566669 CLEC4GQ6UXB4 293 aa36.75■■■■□ 3.47
UBFD1-206ENST00000566669 KCNQ3O43525 872 aa36.74■■■■□ 3.47
UBFD1-206ENST00000566669 DLEC1Q9Y238 1755 aa36.73■■■■□ 3.47
UBFD1-206ENST00000566669 CAMTA2O94983 1202 aa36.73■■■■□ 3.47
UBFD1-206ENST00000566669 TAF7Q15545 349 aaPredicted RBP36.73■■■■□ 3.47
UBFD1-206ENST00000566669 DZIP3Q86Y13 1208 aaKnown RBP36.73■■■■□ 3.47
UBFD1-206ENST00000566669 ZNF652Q9Y2D9 606 aa36.73■■■■□ 3.47
UBFD1-206ENST00000566669 LMNB1P20700 586 aa36.72■■■■□ 3.47
UBFD1-206ENST00000566669 C16orf71Q8IYS4 520 aaPredicted RBP36.72■■■■□ 3.47
UBFD1-206ENST00000566669 PNISRQ8TF01 805 aaKnown RBP36.72■■■■□ 3.47
UBFD1-206ENST00000566669 USP16Q9Y5T5 823 aa36.72■■■■□ 3.47
UBFD1-206ENST00000566669 NPHP1O15259 732 aa36.71■■■■□ 3.47
UBFD1-206ENST00000566669 PRR5LQ6MZQ0 368 aa36.7■■■■□ 3.47
UBFD1-206ENST00000566669 CNBD1Q8NA66 436 aa36.7■■■■□ 3.47
UBFD1-206ENST00000566669 NMRK2Q9NPI5 230 aa36.7■■■■□ 3.47
UBFD1-206ENST00000566669 APLP1P51693 650 aa36.69■■■■□ 3.46
UBFD1-206ENST00000566669 ST5P78524 1137 aa36.69■■■■□ 3.46
UBFD1-206ENST00000566669 RBM46Q8TBY0 533 aaKnown RBP36.69■■■■□ 3.46
UBFD1-206ENST00000566669 DCTN1Q14203 1278 aa36.65■■■■□ 3.46
UBFD1-206ENST00000566669 ZNF622Q969S3 477 aaKnown RBP eCLIP36.64■■■■□ 3.463e-6■□□□□ 10.4
UBFD1-206ENST00000566669 FSTL1Q12841 308 aa36.63■■■■□ 3.45
UBFD1-206ENST00000566669 CNKSR1Q969H4 720 aa36.63■■■■□ 3.45
UBFD1-206ENST00000566669 SBF1O95248 1867 aa36.62■■■■□ 3.45
UBFD1-206ENST00000566669 BCORQ6W2J9 1755 aa36.61■■■■□ 3.45
UBFD1-206ENST00000566669 RASSF7Q02833 373 aa36.61■■■■□ 3.45
UBFD1-206ENST00000566669 SOGA3Q5TF21 947 aa36.61■■■■□ 3.45
UBFD1-206ENST00000566669 STYK1Q6J9G0 422 aa36.61■■■■□ 3.45
UBFD1-206ENST00000566669 MAPK8IP3Q9UPT6 1336 aa36.6■■■■□ 3.45
UBFD1-206ENST00000566669 NFE2L2Q16236 605 aa36.6■■■■□ 3.45
UBFD1-206ENST00000566669 PLEKHF1Q96S99 279 aa36.6■■■■□ 3.45
UBFD1-206ENST00000566669 PRAMEF22A3QJZ6 481 aa36.59■■■■□ 3.45
UBFD1-206ENST00000566669 RALBP1Q15311 655 aa36.59■■■■□ 3.45
UBFD1-206ENST00000566669 NBPF5PQ86XG9 351 aaPredicted RBP36.59■■■■□ 3.45
UBFD1-206ENST00000566669 TNRC6CQ9HCJ0 1690 aaKnown RBP36.58■■■■□ 3.45
UBFD1-206ENST00000566669 GLTPD2A6NH11 291 aa36.57■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms