RNA–Protein interactions for RNA: ENST00000566547.1

GGA2-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-206ENST00000566547 ARHGAP27Q6ZUM4 889 aa29.97■■■□□ 2.39
GGA2-206ENST00000566547 GAS2L2Q8NHY3 880 aa29.97■■■□□ 2.39
GGA2-206ENST00000566547 PHACTR3Q96KR7 559 aa29.97■■■□□ 2.39
GGA2-206ENST00000566547 SIPA1L3O60292 1781 aaPredicted RBP29.97■■■□□ 2.39
GGA2-206ENST00000566547 CANXP27824 592 aaKnown RBP29.96■■■□□ 2.39
GGA2-206ENST00000566547 TEFQ10587 303 aa29.96■■■□□ 2.39
GGA2-206ENST00000566547 TTC5Q8N0Z6 440 aa29.96■■■□□ 2.39
GGA2-206ENST00000566547 CHRNA5P30532 468 aa29.95■■■□□ 2.39
GGA2-206ENST00000566547 VSIG10Q8N0Z9 540 aa29.95■■■□□ 2.39
GGA2-206ENST00000566547 AFDNP55196 1824 aaKnown RBP29.94■■■□□ 2.38
GGA2-206ENST00000566547 PRKAR2BP31323 418 aa29.94■■■□□ 2.38
GGA2-206ENST00000566547 ZNF496Q96IT1 587 aaPredicted RBP29.94■■■□□ 2.38
GGA2-206ENST00000566547 NARFQ9UHQ1 456 aa29.94■■■□□ 2.38
GGA2-206ENST00000566547 CFAP53Q96M91 514 aa29.93■■■□□ 2.38
GGA2-206ENST00000566547 RSPH6AQ9H0K4 717 aa29.93■■■□□ 2.38
GGA2-206ENST00000566547 BCL2L12Q9HB09 334 aa29.93■■■□□ 2.38
GGA2-206ENST00000566547 ARFGEF1Q9Y6D6 1849 aa29.93■■■□□ 2.38
GGA2-206ENST00000566547 PPP2R1AP30153 589 aa29.92■■■□□ 2.38
GGA2-206ENST00000566547 NFIXQ14938 502 aa29.92■■■□□ 2.38
GGA2-206ENST00000566547 ZNF790Q6PG37 636 aa29.91■■■□□ 2.38
GGA2-206ENST00000566547 PIM2Q9P1W9 311 aa29.91■■■□□ 2.38
GGA2-206ENST00000566547 HEG1Q9ULI3 1381 aa29.89■■■□□ 2.37
GGA2-206ENST00000566547 KCNQ3O43525 872 aa29.88■■■□□ 2.37
GGA2-206ENST00000566547 STARD3NLO95772 234 aa29.88■■■□□ 2.37
GGA2-206ENST00000566547 U2AF1L5P0DN76 240 aaPredicted RBP29.87■■■□□ 2.37
GGA2-206ENST00000566547 U2AF1Q01081 240 aaKnown RBP eCLIP29.87■■■□□ 2.37
GGA2-206ENST00000566547 DALRD3Q5D0E6 543 aaKnown RBP29.87■■■□□ 2.37
GGA2-206ENST00000566547 NRXN2Q9P2S2 1712 aa29.86■■■□□ 2.37
GGA2-206ENST00000566547 ZNF330Q9Y3S2 320 aaPredicted RBP29.86■■■□□ 2.37
GGA2-206ENST00000566547 CEMIPQ8WUJ3 1361 aa29.86■■■□□ 2.37
GGA2-206ENST00000566547 KIF3CO14782 793 aa29.85■■■□□ 2.37
GGA2-206ENST00000566547 EIF5P55010 431 aaKnown RBP29.85■■■□□ 2.37
GGA2-206ENST00000566547 BICDL1Q6ZP65 573 aa29.85■■■□□ 2.37
GGA2-206ENST00000566547 NUDCQ9Y266 331 aa29.85■■■□□ 2.37
GGA2-206ENST00000566547 SERPINB2P05120 415 aa29.84■■■□□ 2.37
GGA2-206ENST00000566547 C9orf131Q5VYM1 1079 aa29.83■■■□□ 2.37
GGA2-206ENST00000566547 BTBD11A6QL63 1104 aa29.82■■■□□ 2.36
GGA2-206ENST00000566547 MCM10Q7L590 875 aa29.82■■■□□ 2.36
GGA2-206ENST00000566547 FMNL2Q96PY5 1086 aa29.82■■■□□ 2.36
GGA2-206ENST00000566547 CARMIL3Q8ND23 1372 aa29.81■■■□□ 2.36
GGA2-206ENST00000566547 A1BGP04217 495 aa29.81■■■□□ 2.36
GGA2-206ENST00000566547 TBC1D2BQ9UPU7 963 aa29.81■■■□□ 2.36
GGA2-206ENST00000566547 SCN7AQ01118 1682 aa29.79■■■□□ 2.36
GGA2-206ENST00000566547 DCTN1Q14203 1278 aa29.79■■■□□ 2.36
GGA2-206ENST00000566547 TBC1D9BQ66K14 1250 aa29.79■■■□□ 2.36
GGA2-206ENST00000566547 TEX13AQ9BXU3 409 aaPredicted RBP29.79■■■□□ 2.36
GGA2-206ENST00000566547 A0A087WZG4 1122 aa29.78■■■□□ 2.36
GGA2-206ENST00000566547 PRAMEF22A3QJZ6 481 aa29.78■■■□□ 2.36
GGA2-206ENST00000566547 DLEC1Q9Y238 1755 aa29.77■■■□□ 2.36
GGA2-206ENST00000566547 SBF1O95248 1867 aa29.77■■■□□ 2.36
GGA2-206ENST00000566547 PIP4K2AP48426 406 aaPredicted RBP29.77■■■□□ 2.36
GGA2-206ENST00000566547 NMRK2Q9NPI5 230 aa29.77■■■□□ 2.36
GGA2-206ENST00000566547 CCDC24Q8N4L8 307 aa29.76■■■□□ 2.35
GGA2-206ENST00000566547 RTF1Q92541 710 aaKnown RBP29.76■■■□□ 2.35
GGA2-206ENST00000566547 HSPA6P17066 643 aa29.75■■■□□ 2.35
GGA2-206ENST00000566547 IL6STP40189 918 aaPredicted RBP29.75■■■□□ 2.35
GGA2-206ENST00000566547 C2CD5Q86YS7 1000 aa29.75■■■□□ 2.35
GGA2-206ENST00000566547 RNF181Q9P0P0 153 aa29.75■■■□□ 2.35
GGA2-206ENST00000566547 USP16Q9Y5T5 823 aa29.75■■■□□ 2.35
GGA2-206ENST00000566547 ANKRD31Q8N7Z5 1873 aa29.74■■■□□ 2.35
GGA2-206ENST00000566547 RASSF7Q02833 373 aa29.74■■■□□ 2.35
GGA2-206ENST00000566547 CAMTA2O94983 1202 aa29.71■■■□□ 2.35
GGA2-206ENST00000566547 BCORQ6W2J9 1755 aa29.69■■■□□ 2.34
GGA2-206ENST00000566547 DLG5Q8TDM6 1919 aa29.69■■■□□ 2.34
GGA2-206ENST00000566547 H0YIN7 160 aa29.69■■■□□ 2.34
GGA2-206ENST00000566547 PRR5LQ6MZQ0 368 aa29.69■■■□□ 2.34
GGA2-206ENST00000566547 NPM2Q86SE8 214 aaKnown RBP29.69■■■□□ 2.34
GGA2-206ENST00000566547 TTLL6Q8N841 843 aa29.69■■■□□ 2.34
GGA2-206ENST00000566547 COL11A2P13942 1736 aaPredicted RBP29.68■■■□□ 2.34
GGA2-206ENST00000566547 DZIP3Q86Y13 1208 aaKnown RBP29.68■■■□□ 2.34
GGA2-206ENST00000566547 MIS18AQ9NYP9 233 aa29.68■■■□□ 2.34
GGA2-206ENST00000566547 PRELPP51888 382 aa29.67■■■□□ 2.34
GGA2-206ENST00000566547 SNRPA1P09661 255 aaKnown RBP29.66■■■□□ 2.34
GGA2-206ENST00000566547 CCDC88AQ3V6T2 1871 aa29.65■■■□□ 2.34
GGA2-206ENST00000566547 TOMM70O94826 608 aa29.65■■■□□ 2.34
GGA2-206ENST00000566547 ZNF622Q969S3 477 aaKnown RBP eCLIP29.65■■■□□ 2.34
GGA2-206ENST00000566547 ZNF219Q9P2Y4 722 aaPredicted RBP29.65■■■□□ 2.34
GGA2-206ENST00000566547 HTATSF1O43719 755 aaKnown RBP29.64■■■□□ 2.34
GGA2-206ENST00000566547 SETDB2Q96T68 719 aa29.64■■■□□ 2.34
GGA2-206ENST00000566547 BRIP1Q9BX63 1249 aa29.63■■■□□ 2.33
GGA2-206ENST00000566547 TAF7Q15545 349 aaPredicted RBP29.62■■■□□ 2.33
GGA2-206ENST00000566547 RRAGCQ9HB90 399 aa29.62■■■□□ 2.33
GGA2-206ENST00000566547 CACNA1SQ13698 1873 aa29.61■■■□□ 2.33
GGA2-206ENST00000566547 NBPF26B4DH59 902 aa29.61■■■□□ 2.33
GGA2-206ENST00000566547 NPHP1O15259 732 aa29.61■■■□□ 2.33
GGA2-206ENST00000566547 NBPF10Q6P3W6 841 aaKnown RBP29.61■■■□□ 2.33
GGA2-206ENST00000566547 NBPF15Q8N660 670 aa29.61■■■□□ 2.33
GGA2-206ENST00000566547 CNBD1Q8NA66 436 aa29.61■■■□□ 2.33
GGA2-206ENST00000566547 NFKBIEO00221 500 aa29.6■■■□□ 2.33
GGA2-206ENST00000566547 PDE6BP35913 854 aa29.6■■■□□ 2.33
GGA2-206ENST00000566547 PLEKHF1Q96S99 279 aa29.6■■■□□ 2.33
GGA2-206ENST00000566547 KDM2BQ8NHM5 1336 aa29.6■■■□□ 2.33
GGA2-206ENST00000566547 LMNB1P20700 586 aa29.59■■■□□ 2.33
GGA2-206ENST00000566547 THUMPD2Q9BTF0 503 aaKnown RBP29.59■■■□□ 2.33
GGA2-206ENST00000566547 TIAM2Q8IVF5 1701 aa29.59■■■□□ 2.33
GGA2-206ENST00000566547 C21orf2O43822 256 aa29.58■■■□□ 2.33
GGA2-206ENST00000566547 C16orf71Q8IYS4 520 aaPredicted RBP29.58■■■□□ 2.33
GGA2-206ENST00000566547 TNRC6CQ9HCJ0 1690 aaKnown RBP29.57■■■□□ 2.32
GGA2-206ENST00000566547 NEFMP07197 916 aa29.57■■■□□ 2.32
GGA2-206ENST00000566547 KDM3BQ7LBC6 1761 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms