RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 RHPN1Q8TCX5 695 aa17.24■□□□□ 0.35
CDH1-209ENST00000566510 SSH3Q8TE77 659 aa17.24■□□□□ 0.35
CDH1-209ENST00000566510 CACNA1FO60840 1977 aa17.23■□□□□ 0.35
CDH1-209ENST00000566510 TCHHQ07283 1943 aa17.22■□□□□ 0.35
CDH1-209ENST00000566510 TUBGCP6Q96RT7 1819 aa17.22■□□□□ 0.35
CDH1-209ENST00000566510 GADD45BO75293 160 aaPredicted RBP17.22■□□□□ 0.35
CDH1-209ENST00000566510 ANXA1P04083 346 aa17.22■□□□□ 0.35
CDH1-209ENST00000566510 CWC27Q6UX04 472 aaKnown RBP17.22■□□□□ 0.35
CDH1-209ENST00000566510 RAB11FIP3O75154 756 aa17.22■□□□□ 0.35
CDH1-209ENST00000566510 HSPA4P34932 840 aa17.22■□□□□ 0.35
CDH1-209ENST00000566510 XPCQ01831 940 aaPredicted RBP17.22■□□□□ 0.35
CDH1-209ENST00000566510 SYAP1Q96A49 352 aaPredicted RBP17.22■□□□□ 0.35
CDH1-209ENST00000566510 PDLIM2Q96JY6 352 aa17.22■□□□□ 0.35
CDH1-209ENST00000566510 NOL7Q9UMY1 257 aaKnown RBP17.22■□□□□ 0.35
CDH1-209ENST00000566510 PIK3C2AO00443 1686 aa17.22■□□□□ 0.35
CDH1-209ENST00000566510 PI4KAP2A4QPH2 592 aa17.21■□□□□ 0.35
CDH1-209ENST00000566510 OFD1O75665 1012 aa17.21■□□□□ 0.35
CDH1-209ENST00000566510 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.21■□□□□ 0.35
CDH1-209ENST00000566510 PI4KAP1Q8N8J0 262 aa17.21■□□□□ 0.35
CDH1-209ENST00000566510 CHPF2Q9P2E5 772 aa17.21■□□□□ 0.35
CDH1-209ENST00000566510 RRP9O43818 475 aaKnown RBP17.21■□□□□ 0.35
CDH1-209ENST00000566510 TPM2P07951 284 aa17.21■□□□□ 0.35
CDH1-209ENST00000566510 HS1BP3Q53T59 392 aa17.21■□□□□ 0.35
CDH1-209ENST00000566510 USP48Q86UV5 1035 aa17.21■□□□□ 0.35
CDH1-209ENST00000566510 TSPY26PQ9H489 355 aa17.21■□□□□ 0.35
CDH1-209ENST00000566510 SPG7Q9UQ90 795 aa17.21■□□□□ 0.35
CDH1-209ENST00000566510 WDR33Q9C0J8 1336 aaKnown RBP17.2■□□□□ 0.34
CDH1-209ENST00000566510 PTMAP06454 111 aaKnown RBP17.2■□□□□ 0.34
CDH1-209ENST00000566510 CNTROBQ8N137 903 aa17.2■□□□□ 0.34
CDH1-209ENST00000566510 KIF1BPQ96EK5 621 aa17.2■□□□□ 0.34
CDH1-209ENST00000566510 LGR6Q9HBX8 967 aa17.2■□□□□ 0.34
CDH1-209ENST00000566510 R3HCC1Q9Y3T6 440 aaKnown RBP17.2■□□□□ 0.34
CDH1-209ENST00000566510 TBX22Q9Y458 520 aa17.2■□□□□ 0.34
CDH1-209ENST00000566510 DIP2AQ14689 1571 aa17.2■□□□□ 0.34
CDH1-209ENST00000566510 AOX1Q06278 1338 aa17.2■□□□□ 0.34
CDH1-209ENST00000566510 PI4K2BQ8TCG2 481 aa17.2■□□□□ 0.34
CDH1-209ENST00000566510 SNX14Q9Y5W7 946 aa17.19■□□□□ 0.34
CDH1-209ENST00000566510 SGSM2O43147 1006 aa17.18■□□□□ 0.34
CDH1-209ENST00000566510 DTNBO60941 627 aa17.18■□□□□ 0.34
CDH1-209ENST00000566510 GLIPR1L2Q4G1C9 344 aa17.18■□□□□ 0.34
CDH1-209ENST00000566510 DNAAF4Q8WXU2 420 aa17.18■□□□□ 0.34
CDH1-209ENST00000566510 KCNQ3O43525 872 aa17.18■□□□□ 0.34
CDH1-209ENST00000566510 CPA1P15085 419 aa17.18■□□□□ 0.34
CDH1-209ENST00000566510 KCNA6P17658 529 aa17.18■□□□□ 0.34
CDH1-209ENST00000566510 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.18■□□□□ 0.34
CDH1-209ENST00000566510 AK2P54819 239 aa17.17■□□□□ 0.34
CDH1-209ENST00000566510 POLA2Q14181 598 aa17.17■□□□□ 0.34
CDH1-209ENST00000566510 RASEFQ8IZ41 740 aa17.17■□□□□ 0.34
CDH1-209ENST00000566510 BABAM1Q9NWV8 329 aa17.17■□□□□ 0.34
CDH1-209ENST00000566510 RAD50Q92878 1312 aa17.17■□□□□ 0.34
CDH1-209ENST00000566510 TEFQ10587 303 aa17.17■□□□□ 0.34
CDH1-209ENST00000566510 CCDC39Q9UFE4 941 aa17.17■□□□□ 0.34
CDH1-209ENST00000566510 ZKSCAN5Q9Y2L8 839 aa17.17■□□□□ 0.34
CDH1-209ENST00000566510 LRRC37A3O60309 1634 aa17.17■□□□□ 0.34
CDH1-209ENST00000566510 EIF4A1P60842 406 aaKnown RBP17.16■□□□□ 0.34
CDH1-209ENST00000566510 MPNDQ8N594 471 aa17.16■□□□□ 0.34
CDH1-209ENST00000566510 RBM33Q96EV2 1170 aaKnown RBP17.16■□□□□ 0.34
CDH1-209ENST00000566510 DIAPH3Q9NSV4 1193 aa17.16■□□□□ 0.34
CDH1-209ENST00000566510 CNPY2Q9Y2B0 182 aa17.16■□□□□ 0.34
CDH1-209ENST00000566510 PHF14O94880 888 aa17.16■□□□□ 0.34
CDH1-209ENST00000566510 CASTP20810 708 aaKnown RBP17.16■□□□□ 0.34
CDH1-209ENST00000566510 PXDNLA1KZ92 1463 aa17.16■□□□□ 0.34
CDH1-209ENST00000566510 BEND3Q5T5X7 828 aa17.15■□□□□ 0.34
CDH1-209ENST00000566510 NBPF6Q5VWK0 638 aa17.15■□□□□ 0.34
CDH1-209ENST00000566510 NBPF4Q96M43 638 aa17.15■□□□□ 0.34
CDH1-209ENST00000566510 BTBD11A6QL63 1104 aa17.15■□□□□ 0.34
CDH1-209ENST00000566510 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
CDH1-209ENST00000566510 LSG1Q9H089 658 aaKnown RBP17.15■□□□□ 0.34
CDH1-209ENST00000566510 C9orf78Q9NZ63 289 aaPredicted RBP17.15■□□□□ 0.34
CDH1-209ENST00000566510 SMC3Q9UQE7 1217 aa17.15■□□□□ 0.34
CDH1-209ENST00000566510 LIMCH1Q9UPQ0 1083 aa17.14■□□□□ 0.34
CDH1-209ENST00000566510 ZNF500O60304 480 aaPredicted RBP17.14■□□□□ 0.33
CDH1-209ENST00000566510 RBM10P98175 930 aaKnown RBP17.14■□□□□ 0.33
CDH1-209ENST00000566510 HSP90AB4PQ58FF6 505 aa17.14■□□□□ 0.33
CDH1-209ENST00000566510 THEMISQ8N1K5 641 aaPredicted RBP17.14■□□□□ 0.33
CDH1-209ENST00000566510 CLASRPQ8N2M8 674 aaKnown RBP17.14■□□□□ 0.33
CDH1-209ENST00000566510 NWD1Q149M9 1564 aa17.14■□□□□ 0.33
CDH1-209ENST00000566510 RUFY3Q7L099 469 aa17.14■□□□□ 0.33
CDH1-209ENST00000566510 DDX54Q8TDD1 881 aaKnown RBP17.14■□□□□ 0.33
CDH1-209ENST00000566510 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.14■□□□□ 0.33
CDH1-209ENST00000566510 FIBPO43427 364 aa17.13■□□□□ 0.33
CDH1-209ENST00000566510 STX6O43752 255 aa17.13■□□□□ 0.33
CDH1-209ENST00000566510 ZSCAN22P10073 491 aaPredicted RBP17.13■□□□□ 0.33
CDH1-209ENST00000566510 RPAP1Q9BWH6 1393 aaPredicted RBP17.13■□□□□ 0.33
CDH1-209ENST00000566510 KIF13AQ9H1H9 1805 aa17.13■□□□□ 0.33
CDH1-209ENST00000566510 GLRX3O76003 335 aaKnown RBP17.13■□□□□ 0.33
CDH1-209ENST00000566510 SYT1P21579 422 aa17.13■□□□□ 0.33
CDH1-209ENST00000566510 ZNF530Q6P9A1 599 aaPredicted RBP17.13■□□□□ 0.33
CDH1-209ENST00000566510 LRRC59Q96AG4 307 aaKnown RBP17.13■□□□□ 0.33
CDH1-209ENST00000566510 IL17RAQ96F46 866 aa17.13■□□□□ 0.33
CDH1-209ENST00000566510 EPB41L2O43491 1005 aaKnown RBP17.12■□□□□ 0.33
CDH1-209ENST00000566510 CCDC83Q8IWF9 413 aa17.12■□□□□ 0.33
CDH1-209ENST00000566510 TTC14Q96N46 770 aa17.12■□□□□ 0.33
CDH1-209ENST00000566510 PA2G4Q9UQ80 394 aaKnown RBP17.12■□□□□ 0.33
CDH1-209ENST00000566510 IFIT2P09913 472 aaKnown RBP17.12■□□□□ 0.33
CDH1-209ENST00000566510 PRPF40BQ6NWY9 871 aaKnown RBP17.12■□□□□ 0.33
CDH1-209ENST00000566510 JAKMIP1Q96N16 626 aaKnown RBP17.12■□□□□ 0.33
CDH1-209ENST00000566510 RUFY2Q8WXA3 655 aa17.11■□□□□ 0.33
CDH1-209ENST00000566510 MAP3K2Q9Y2U5 619 aa17.11■□□□□ 0.33
CDH1-209ENST00000566510 KCNJ4P48050 445 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms