RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 MRC1P22897 1456 aa16.06■□□□□ 0.16
UBR1-206ENST00000566493 FKBP8Q14318 412 aa16.06■□□□□ 0.16
UBR1-206ENST00000566493 ZNF526Q8TF50 670 aaPredicted RBP16.06■□□□□ 0.16
UBR1-206ENST00000566493 DPEP1P16444 411 aa16.05■□□□□ 0.16
UBR1-206ENST00000566493 GAS2L2Q8NHY3 880 aa16.05■□□□□ 0.16
UBR1-206ENST00000566493 CFAP53Q96M91 514 aa16.05■□□□□ 0.16
UBR1-206ENST00000566493 KIAA1551Q9HCM1 1747 aa16.05■□□□□ 0.16
UBR1-206ENST00000566493 ADCY9O60503 1353 aa16.04■□□□□ 0.16
UBR1-206ENST00000566493 FCHSD2O94868 740 aa16.04■□□□□ 0.16
UBR1-206ENST00000566493 CYP19A1P11511 503 aaPredicted RBP16.04■□□□□ 0.16
UBR1-206ENST00000566493 POLA2Q14181 598 aa16.04■□□□□ 0.16
UBR1-206ENST00000566493 ARHGAP27Q6ZUM4 889 aa16.04■□□□□ 0.16
UBR1-206ENST00000566493 TTC5Q8N0Z6 440 aa16.04■□□□□ 0.16
UBR1-206ENST00000566493 VSIG10Q8N0Z9 540 aa16.04■□□□□ 0.16
UBR1-206ENST00000566493 SOS1Q07889 1333 aaPredicted RBP16.03■□□□□ 0.16
UBR1-206ENST00000566493 ADAMTS7Q9UKP4 1686 aa16.03■□□□□ 0.16
UBR1-206ENST00000566493 GNAT3A8MTJ3 354 aa16.03■□□□□ 0.16
UBR1-206ENST00000566493 TEFQ10587 303 aa16.03■□□□□ 0.16
UBR1-206ENST00000566493 USPL1Q5W0Q7 1092 aa16.03■□□□□ 0.16
UBR1-206ENST00000566493 COL3A1P02461 1466 aaPredicted RBP16.03■□□□□ 0.16
UBR1-206ENST00000566493 DDR1Q08345 913 aa16.02■□□□□ 0.16
UBR1-206ENST00000566493 PIM2Q9P1W9 311 aa16.02■□□□□ 0.16
UBR1-206ENST00000566493 KCPQ6ZWJ8 1503 aa16.02■□□□□ 0.15
UBR1-206ENST00000566493 STARD3NLO95772 234 aa16.01■□□□□ 0.15
UBR1-206ENST00000566493 TM4SF1P30408 202 aa16.01■□□□□ 0.15
UBR1-206ENST00000566493 NARFQ9UHQ1 456 aa16.01■□□□□ 0.15
UBR1-206ENST00000566493 NUDCQ9Y266 331 aa16.01■□□□□ 0.15
UBR1-206ENST00000566493 COL15A1P39059 1388 aa16■□□□□ 0.15
UBR1-206ENST00000566493 BRCA1P38398 1863 aaKnown RBP16■□□□□ 0.15
UBR1-206ENST00000566493 DALRD3Q5D0E6 543 aaKnown RBP16■□□□□ 0.15
UBR1-206ENST00000566493 ZBTB1Q9Y2K1 713 aa16■□□□□ 0.15
UBR1-206ENST00000566493 POLRMTO00411 1230 aaKnown RBP15.99■□□□□ 0.15
UBR1-206ENST00000566493 KCNA3P22001 575 aa15.99■□□□□ 0.15
UBR1-206ENST00000566493 CANXP27824 592 aaKnown RBP15.99■□□□□ 0.15
UBR1-206ENST00000566493 IL17REQ8NFR9 667 aa15.99■□□□□ 0.15
UBR1-206ENST00000566493 TEX13AQ9BXU3 409 aaPredicted RBP15.99■□□□□ 0.15
UBR1-206ENST00000566493 UBR2Q8IWV8 1755 aa15.99■□□□□ 0.15
UBR1-206ENST00000566493 A0A087WZG4 1122 aa15.98■□□□□ 0.15
UBR1-206ENST00000566493 ZNF790Q6PG37 636 aa15.98■□□□□ 0.15
UBR1-206ENST00000566493 ARFGEF1Q9Y6D6 1849 aa15.98■□□□□ 0.15
UBR1-206ENST00000566493 CHRNA5P30532 468 aa15.97■□□□□ 0.15
UBR1-206ENST00000566493 PRKAR2BP31323 418 aa15.97■□□□□ 0.15
UBR1-206ENST00000566493 NFIXQ14938 502 aa15.96■□□□□ 0.15
UBR1-206ENST00000566493 NPM2Q86SE8 214 aaKnown RBP15.96■□□□□ 0.15
UBR1-206ENST00000566493 ZNF496Q96IT1 587 aaPredicted RBP15.96■□□□□ 0.15
UBR1-206ENST00000566493 FMNL2Q96PY5 1086 aa15.96■□□□□ 0.15
UBR1-206ENST00000566493 HEG1Q9ULI3 1381 aa15.96■□□□□ 0.15
UBR1-206ENST00000566493 BTBD11A6QL63 1104 aa15.95■□□□□ 0.14
UBR1-206ENST00000566493 SERPINB2P05120 415 aa15.95■□□□□ 0.14
UBR1-206ENST00000566493 U2AF1L5P0DN76 240 aaPredicted RBP15.95■□□□□ 0.14
UBR1-206ENST00000566493 PPP2R1AP30153 589 aa15.95■□□□□ 0.14
UBR1-206ENST00000566493 U2AF1Q01081 240 aaKnown RBP eCLIP15.95■□□□□ 0.14
UBR1-206ENST00000566493 PHACTR3Q96KR7 559 aa15.95■□□□□ 0.14
UBR1-206ENST00000566493 RSPH6AQ9H0K4 717 aa15.95■□□□□ 0.14
UBR1-206ENST00000566493 SIPA1L3O60292 1781 aaPredicted RBP15.95■□□□□ 0.14
UBR1-206ENST00000566493 AFDNP55196 1824 aaKnown RBP15.94■□□□□ 0.14
UBR1-206ENST00000566493 EIF5P55010 431 aaKnown RBP15.94■□□□□ 0.14
UBR1-206ENST00000566493 C9orf131Q5VYM1 1079 aa15.94■□□□□ 0.14
UBR1-206ENST00000566493 RTF1Q92541 710 aaKnown RBP15.94■□□□□ 0.14
UBR1-206ENST00000566493 ZNF330Q9Y3S2 320 aaPredicted RBP15.94■□□□□ 0.14
UBR1-206ENST00000566493 KIF3CO14782 793 aa15.93■□□□□ 0.14
UBR1-206ENST00000566493 HSPA6P17066 643 aa15.93■□□□□ 0.14
UBR1-206ENST00000566493 BICDL1Q6ZP65 573 aa15.93■□□□□ 0.14
UBR1-206ENST00000566493 BCL2L12Q9HB09 334 aa15.93■□□□□ 0.14
UBR1-206ENST00000566493 CEMIPQ8WUJ3 1361 aa15.92■□□□□ 0.14
UBR1-206ENST00000566493 ATXN8OSP0DMR3 200 aa15.92■□□□□ 0.14
UBR1-206ENST00000566493 IL6STP40189 918 aaPredicted RBP15.92■□□□□ 0.14
UBR1-206ENST00000566493 C2CD5Q86YS7 1000 aa15.91■□□□□ 0.14
UBR1-206ENST00000566493 RNF181Q9P0P0 153 aa15.91■□□□□ 0.14
UBR1-206ENST00000566493 TBC1D2BQ9UPU7 963 aa15.91■□□□□ 0.14
UBR1-206ENST00000566493 NRXN2Q9P2S2 1712 aa15.91■□□□□ 0.14
UBR1-206ENST00000566493 H0YIN7 160 aa15.9■□□□□ 0.14
UBR1-206ENST00000566493 NEFMP07197 916 aa15.9■□□□□ 0.14
UBR1-206ENST00000566493 KCNQ3O43525 872 aa15.89■□□□□ 0.13
UBR1-206ENST00000566493 TOMM70O94826 608 aa15.89■□□□□ 0.13
UBR1-206ENST00000566493 A1BGP04217 495 aa15.89■□□□□ 0.13
UBR1-206ENST00000566493 TBC1D9BQ66K14 1250 aa15.89■□□□□ 0.13
UBR1-206ENST00000566493 C16orf71Q8IYS4 520 aaPredicted RBP15.89■□□□□ 0.13
UBR1-206ENST00000566493 TTLL6Q8N841 843 aa15.89■□□□□ 0.13
UBR1-206ENST00000566493 KDM2BQ8NHM5 1336 aa15.89■□□□□ 0.13
UBR1-206ENST00000566493 NPHP1O15259 732 aa15.88■□□□□ 0.13
UBR1-206ENST00000566493 HTATSF1O43719 755 aaKnown RBP15.88■□□□□ 0.13
UBR1-206ENST00000566493 MCM10Q7L590 875 aa15.88■□□□□ 0.13
UBR1-206ENST00000566493 NMRK2Q9NPI5 230 aa15.88■□□□□ 0.13
UBR1-206ENST00000566493 PDZRN3Q9UPQ7 1066 aa15.88■□□□□ 0.13
UBR1-206ENST00000566493 DLEC1Q9Y238 1755 aa15.87■□□□□ 0.13
UBR1-206ENST00000566493 SBF1O95248 1867 aa15.87■□□□□ 0.13
UBR1-206ENST00000566493 SNRPA1P09661 255 aaKnown RBP15.87■□□□□ 0.13
UBR1-206ENST00000566493 PDE6BP35913 854 aa15.87■□□□□ 0.13
UBR1-206ENST00000566493 SETDB2Q96T68 719 aa15.87■□□□□ 0.13
UBR1-206ENST00000566493 CARMIL3Q8ND23 1372 aa15.87■□□□□ 0.13
UBR1-206ENST00000566493 SCN7AQ01118 1682 aa15.86■□□□□ 0.13
UBR1-206ENST00000566493 DZIP3Q86Y13 1208 aaKnown RBP15.86■□□□□ 0.13
UBR1-206ENST00000566493 ZNF622Q969S3 477 aaKnown RBP eCLIP15.86■□□□□ 0.13
UBR1-206ENST00000566493 BRIP1Q9BX63 1249 aa15.86■□□□□ 0.13
UBR1-206ENST00000566493 USP16Q9Y5T5 823 aa15.86■□□□□ 0.13
UBR1-206ENST00000566493 LMNB1P20700 586 aa15.85■□□□□ 0.13
UBR1-206ENST00000566493 DCTN1Q14203 1278 aa15.85■□□□□ 0.13
UBR1-206ENST00000566493 CAMTA2O94983 1202 aa15.84■□□□□ 0.13
UBR1-206ENST00000566493 APLP1P51693 650 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms