RNA–Protein interactions for RNA: ENST00000566452.1

BBS2-215, Transcript of Bardet-Biedl syndrome 2, human

TSL 2

Gene BBS2, Length 299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS2-215	ENST00000566452	CTH	P32929	405 aa		5.74	□□□□□ -1.49
BBS2-215	ENST00000566452	ARID5B	Q14865	1188 aa		5.74	□□□□□ -1.49
BBS2-215	ENST00000566452	NOM1	Q5C9Z4	860 aa	Known RBP	5.74	□□□□□ -1.49
BBS2-215	ENST00000566452	NPAS4	Q8IUM7	802 aa		5.74	□□□□□ -1.49
BBS2-215	ENST00000566452	PHTF2	Q8N3S3	785 aa		5.74	□□□□□ -1.49
BBS2-215	ENST00000566452	LARGE2	Q8N3Y3	721 aa		5.74	□□□□□ -1.49
BBS2-215	ENST00000566452	ZNF594	Q96JF6	807 aa	Predicted RBP	5.74	□□□□□ -1.49
BBS2-215	ENST00000566452	CDK15	Q96Q40	435 aa		5.74	□□□□□ -1.49
BBS2-215	ENST00000566452	DNAAF2	Q9NVR5	837 aa	Known RBP	5.74	□□□□□ -1.49
BBS2-215	ENST00000566452	NOD1	Q9Y239	953 aa		5.74	□□□□□ -1.49
BBS2-215	ENST00000566452	CLDN10	P78369	228 aa		5.73	□□□□□ -1.49
BBS2-215	ENST00000566452	KCNH2	Q12809	1159 aa		5.73	□□□□□ -1.49
BBS2-215	ENST00000566452	SIX5	Q8N196	739 aa		5.73	□□□□□ -1.49
BBS2-215	ENST00000566452	RBM19	Q9Y4C8	960 aa	Known RBP	5.73	□□□□□ -1.49
BBS2-215	ENST00000566452		H3BRB1	525 aa		5.72	□□□□□ -1.49
BBS2-215	ENST00000566452	HSP90B1	P14625	803 aa	Known RBP	5.72	□□□□□ -1.49
BBS2-215	ENST00000566452	C8orf37	Q96NL8	207 aa		5.72	□□□□□ -1.49
BBS2-215	ENST00000566452	TUT1	Q9H6E5	874 aa	Known RBP	5.72	□□□□□ -1.49
BBS2-215	ENST00000566452	CXXC1	Q9P0U4	656 aa	Predicted RBP	5.72	□□□□□ -1.49
BBS2-215	ENST00000566452	SCRIB	Q14160	1630 aa		5.71	□□□□□ -1.5
BBS2-215	ENST00000566452	PRMT3	O60678	531 aa		5.71	□□□□□ -1.5
BBS2-215	ENST00000566452	ABL1	P00519	1130 aa		5.71	□□□□□ -1.5
BBS2-215	ENST00000566452	ITGB7	P26010	798 aa		5.71	□□□□□ -1.5
BBS2-215	ENST00000566452	SEC13	P55735	322 aa		5.71	□□□□□ -1.5
BBS2-215	ENST00000566452	ALYREF	Q86V81	257 aa	Known RBP	5.71	□□□□□ -1.5
BBS2-215	ENST00000566452	GLYCTK	Q8IVS8	523 aa		5.71	□□□□□ -1.5
BBS2-215	ENST00000566452	ADAM32	Q8TC27	787 aa		5.71	□□□□□ -1.5
BBS2-215	ENST00000566452	EVA1B	Q9NVM1	165 aa		5.71	□□□□□ -1.5
BBS2-215	ENST00000566452	DOLK	Q9UPQ8	538 aa		5.71	□□□□□ -1.5
BBS2-215	ENST00000566452	CUX2	O14529	1486 aa		5.71	□□□□□ -1.5
BBS2-215	ENST00000566452	ICMT	O60725	284 aa		5.7	□□□□□ -1.5
BBS2-215	ENST00000566452	BCR	P11274	1271 aa		5.7	□□□□□ -1.5
BBS2-215	ENST00000566452	GAS6	Q14393	721 aa		5.7	□□□□□ -1.5
BBS2-215	ENST00000566452	OCLN	Q16625	522 aa		5.7	□□□□□ -1.5
BBS2-215	ENST00000566452	LCE1D	Q5T752	114 aa		5.7	□□□□□ -1.5
BBS2-215	ENST00000566452	TAS1R3	Q7RTX0	852 aa		5.7	□□□□□ -1.5
BBS2-215	ENST00000566452	PUS7	Q96PZ0	661 aa	Known RBP	5.7	□□□□□ -1.5
BBS2-215	ENST00000566452	OCSTAMP	Q9BR26	566 aa		5.7	□□□□□ -1.5
BBS2-215	ENST00000566452	ARHGAP9	Q9BRR9	750 aa		5.7	□□□□□ -1.5
BBS2-215	ENST00000566452	SCO2	A0A1W2PP80	73 aa		5.69	□□□□□ -1.5
BBS2-215	ENST00000566452	C21orf2	O43822	256 aa		5.69	□□□□□ -1.5
BBS2-215	ENST00000566452	MAPK1	P28482	360 aa		5.69	□□□□□ -1.5
BBS2-215	ENST00000566452	GTF2I	P78347	998 aa		5.69	□□□□□ -1.5
BBS2-215	ENST00000566452	ZNF211	Q13398	564 aa	Predicted RBP	5.69	□□□□□ -1.5
BBS2-215	ENST00000566452	COL19A1	Q14993	1142 aa		5.69	□□□□□ -1.5
BBS2-215	ENST00000566452	ZBTB33	Q86T24	672 aa		5.69	□□□□□ -1.5
BBS2-215	ENST00000566452	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	5.69	□□□□□ -1.5
BBS2-215	ENST00000566452	ASB16	Q96NS5	453 aa		5.69	□□□□□ -1.5
BBS2-215	ENST00000566452	DCTN4	Q9UJW0	460 aa		5.69	□□□□□ -1.5
BBS2-215	ENST00000566452	DKK1	O94907	266 aa		5.68	□□□□□ -1.5
BBS2-215	ENST00000566452	SCNN1A	P37088	669 aa		5.68	□□□□□ -1.5
BBS2-215	ENST00000566452	GRM5	P41594	1212 aa		5.68	□□□□□ -1.5
BBS2-215	ENST00000566452	ZC3H6	P61129	1189 aa	Known RBP	5.68	□□□□□ -1.5
BBS2-215	ENST00000566452	SF3B2	Q13435	895 aa	Known RBP	5.68	□□□□□ -1.5
BBS2-215	ENST00000566452	CCDC102B	Q68D86	513 aa		5.68	□□□□□ -1.5
BBS2-215	ENST00000566452	FBXO33	Q7Z6M2	555 aa		5.68	□□□□□ -1.5
BBS2-215	ENST00000566452	DZIP3	Q86Y13	1208 aa	Known RBP	5.68	□□□□□ -1.5
BBS2-215	ENST00000566452	SREK1	Q8WXA9	508 aa	Known RBP	5.68	□□□□□ -1.5
BBS2-215	ENST00000566452	SEMA6B	Q9H3T3	888 aa		5.68	□□□□□ -1.5
BBS2-215	ENST00000566452	KIAA1024	Q9UPX6	916 aa		5.68	□□□□□ -1.5
BBS2-215	ENST00000566452	ERCC6	Q03468	1493 aa		5.67	□□□□□ -1.5
BBS2-215	ENST00000566452	PSME1	Q06323	249 aa		5.67	□□□□□ -1.5
BBS2-215	ENST00000566452	OXLD1	Q5BKU9	147 aa		5.67	□□□□□ -1.5
BBS2-215	ENST00000566452	RNF20	Q5VTR2	975 aa		5.67	□□□□□ -1.5
BBS2-215	ENST00000566452	TPCN2	Q8NHX9	752 aa		5.67	□□□□□ -1.5
BBS2-215	ENST00000566452	DRC1	Q96MC2	740 aa		5.67	□□□□□ -1.5
BBS2-215	ENST00000566452	CCDC85A	Q96PX6	553 aa	Predicted RBP	5.67	□□□□□ -1.5
BBS2-215	ENST00000566452	MBIP	Q9NS73	344 aa		5.67	□□□□□ -1.5
BBS2-215	ENST00000566452	MYO15B	Q96JP2	1530 aa		5.66	□□□□□ -1.5
BBS2-215	ENST00000566452	ZBTB7B	O15156	539 aa	Predicted RBP	5.66	□□□□□ -1.5
BBS2-215	ENST00000566452	PTCD1	O75127	700 aa	Known RBP	5.66	□□□□□ -1.5
BBS2-215	ENST00000566452	RECK	O95980	971 aa		5.66	□□□□□ -1.5
BBS2-215	ENST00000566452	SH3BP5L	Q7L8J4	393 aa		5.66	□□□□□ -1.5
BBS2-215	ENST00000566452	PRIMPOL	Q96LW4	560 aa		5.66	□□□□□ -1.5
BBS2-215	ENST00000566452	SPINT1	O43278	529 aa		5.65	□□□□□ -1.5
BBS2-215	ENST00000566452	CDK11B	P21127	795 aa	Known RBP	5.65	□□□□□ -1.5
BBS2-215	ENST00000566452	FKBP4	Q02790	459 aa	Known RBP eCLIP	5.65	□□□□□ -1.5
BBS2-215	ENST00000566452	SF3A1	Q15459	793 aa	Known RBP	5.65	□□□□□ -1.5
BBS2-215	ENST00000566452	CCDC125	Q86Z20	511 aa		5.65	□□□□□ -1.5
BBS2-215	ENST00000566452	RGL4	Q8IZJ4	473 aa		5.65	□□□□□ -1.5
BBS2-215	ENST00000566452	GTF3C2	Q8WUA4	911 aa	Predicted RBP	5.65	□□□□□ -1.5
BBS2-215	ENST00000566452	ANO2	Q9NQ90	1003 aa		5.65	□□□□□ -1.5
BBS2-215	ENST00000566452	LRRC4B	Q9NT99	713 aa		5.65	□□□□□ -1.5
BBS2-215	ENST00000566452	CDK11A	Q9UQ88	783 aa	Predicted RBP	5.65	□□□□□ -1.5
BBS2-215	ENST00000566452	IGF1R	P08069	1367 aa		5.65	□□□□□ -1.51
BBS2-215	ENST00000566452	SFI1	A8K8P3	1242 aa		5.64	□□□□□ -1.51
BBS2-215	ENST00000566452		M0R2N6	131 aa		5.64	□□□□□ -1.51
BBS2-215	ENST00000566452	TSGA10IP	Q3SY00	556 aa		5.64	□□□□□ -1.51
BBS2-215	ENST00000566452	EAPP	Q56P03	285 aa	Predicted RBP	5.64	□□□□□ -1.51
BBS2-215	ENST00000566452	HINFP	Q9BQA5	517 aa		5.64	□□□□□ -1.51
BBS2-215	ENST00000566452	MAGEB6P1	A0A0J9YX57	407 aa		5.63	□□□□□ -1.51
BBS2-215	ENST00000566452	COL8A1	P27658	744 aa		5.63	□□□□□ -1.51
BBS2-215	ENST00000566452	CANX	P27824	592 aa	Known RBP	5.63	□□□□□ -1.51
BBS2-215	ENST00000566452	WEE1	P30291	646 aa		5.63	□□□□□ -1.51
BBS2-215	ENST00000566452	SNRPN	P63162	240 aa	Known RBP	5.63	□□□□□ -1.51
BBS2-215	ENST00000566452	ARHGAP4	P98171	946 aa		5.63	□□□□□ -1.51
BBS2-215	ENST00000566452	USP4	Q13107	963 aa		5.63	□□□□□ -1.51
BBS2-215	ENST00000566452	NBPF20	Q3BBV1	942 aa		5.63	□□□□□ -1.51
BBS2-215	ENST00000566452	NBPF11	Q86T75	865 aa		5.63	□□□□□ -1.51
BBS2-215	ENST00000566452	FAM177A1	Q8N128	213 aa	Predicted RBP	5.63	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms